; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G15790 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G15790
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr6:14138348..14142571
RNA-Seq ExpressionCSPI06G15790
SyntenyCSPI06G15790
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]2.5e-20254.2Show/hide
Query:  FTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNINIERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPK
        ++ +Y  SGVGR+WVMWK+ RF F+T+ + ++F+ G +TDL+    VEV+CVYASN + ERR LWR + +I++ W   G+V+GDFN IR+H EAFGG+P 
Subjt:  FTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNINIERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPK

Query:  SGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE----------------------------VSRTQRVVSFCFFNHWVEETSSM
         G+ME+FD+ IR+ADL++P ++G+WFTWTSK+ GSG++RRLDR+LVNDE                                 RVVSF FFNHWVEE S +
Subjt:  SGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE----------------------------VSRTQRVVSFCFFNHWVEETSSM

Query:  DVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPLQ-----------------------------------
        +VV+ +W++   VS +V++++NL +LK IL   FG+HI+++SE+V + K+ MD AQRE+E NPL                                    
Subjt:  DVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPLQ-----------------------------------

Query:  -----------------ISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSG
                           N+L S++D DG+R+++HD V Q+ VNYF NSLGSQ IGYRELS  I+DIVQF W+EECCQALQ PI REEV RVLF MDSG
Subjt:  -----------------ISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSG

Query:  KAPGPDGYSFCFFKGAWTVVGEDF---------------------------------YDDFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPG
        KAPGPDG+S  F+KGAW+VVGEDF                                  +DFRPISCCNV+YKCIS+I  DRLR+WLPSF+S  QS FIPG
Subjt:  KAPGPDGYSFCFFKGAWTVVGEDF---------------------------------YDDFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPG

Query:  RSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFV
        RSII+NILLC ELVGGYH+N+GKPRCT+KVDLQKA D VNWDFLFGL+IAI  PL+FVSW+RACVT   FSI+IN SLEG F+GRKGLRQGD LSPFLFV
Subjt:  RSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFV

Query:  MVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIFCSVDNYSMSFIKETI
        MVMEVLSRMLN  PQ F+FH  C KV+LTHLTFADDLMIFC+ D  S+SFI+E +
Subjt:  MVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIFCSVDNYSMSFIKETI

KAA0057642.1 reverse transcriptase [Cucumis melo var. makuwa]4.6e-17250.39Show/hide
Query:  VKCRVVKDFLAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNIN
        +K + V DFL  S+VGFCC+LETRVR+ NFDS+S RFG+SW ++ +Y  SGVGR+WVMWK+NRF F T+   +QFI+G V                    
Subjt:  VKCRVVKDFLAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNIN

Query:  IERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE---------
                              V+ DFN IR H EA GG+P  G+MEDFDM IR+ADL++P ++G+WFTWTSK+ GSG+MRRLDR+L+ND+         
Subjt:  IERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE---------

Query:  -------------------VSRTQRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRE
                             +  +VVSF  FNHWV++ S +                                 FG+HI+++SE+V + K+ MD AQRE
Subjt:  -------------------VSRTQRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRE

Query:  LEINPL------------------------QISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIG
        +E NP+                        +    L  V+D   +R+++HD V Q+ VNYF NSLGSQ IGYREL+  I+DIVQF W+EECCQALQ PI 
Subjt:  LEINPL------------------------QISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIG

Query:  REEVGRVLFPMDSGKAPGPDGYSFCFFKGAWTVVGEDFYD---------------------------------DFRPISCCNVIYKCISRIFVDRLRVWL
        REEV RVLF MDSGKAPGPDG+S  FFKGAW+V+GEDF D                                 DFRPISCCNV+YKCIS+I  DRLRVWL
Subjt:  REEVGRVLFPMDSGKAPGPDGYSFCFFKGAWTVVGEDFYD---------------------------------DFRPISCCNVIYKCISRIFVDRLRVWL

Query:  PSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRK
        PSF+S  QS FI GRSII+NILLC ELVGGYH+N+GKPRCT+KVDLQKA D VNWDFLFGL I+I  PL+FVSW+ ACVT P FSI+IN SLEG FHGRK
Subjt:  PSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRK

Query:  GLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAK
        G+RQGD LS FLFVMVMEVLSRMLN  PQ FQFH  C K
Subjt:  GLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAK

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]7.5e-19151.72Show/hide
Query:  GLNSLVKCRVVKDFLAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVY
        G+ S +K + V DFL  S+VGFCC LETRVR+ NFD +S RFG+SW ++ +Y  SGVGR+WV+WK+NRF F T  V +QF++G +TDL+    VEV CVY
Subjt:  GLNSLVKCRVVKDFLAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVY

Query:  ASNINIERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDEVSRT
        ASN NIERR+LWRR+ +I++ W    +V+GDFN IR+H+EAFGG+P  G+MEDFD+  R+ADL++P ++G+WFTWTSK+HGSG++RRLDRILVNDE    
Subjt:  ASNINIERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDEVSRT

Query:  QRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPL-----------------
            +       VE+ S ++VV+ +W +   VS +V++++NL+NLK  L   FG+HIQ+++E+V + K+ MDRAQRE+E NP+                 
Subjt:  QRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPL-----------------

Query:  -----------------------------------QISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQAL
                                              N+L S++D DG+R+++HD V Q+ VNYF+NSLGSQ IGYREL   I+DIVQF W+EECCQAL
Subjt:  -----------------------------------QISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQAL

Query:  QTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFKGAWTVVGEDFYD---------------------------------DFRPISCCNVIYKCISRIFVDR
        Q PI REEV RVLF MDSGKAPGPDG+S  FFKGAW+VV EDF D                                 +FRPISCCNVIYKCIS+I  DR
Subjt:  QTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFKGAWTVVGEDFYD---------------------------------DFRPISCCNVIYKCISRIFVDR

Query:  LRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAIVPLRFVSWVRACVTFPTFSIIINESLEGLF
        LRVWLPSF+   QS FIPGRSIIDNILLC ELV GYH+N+GKPRCT+KVDLQKA D VNWDFL                                     
Subjt:  LRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAIVPLRFVSWVRACVTFPTFSIIINESLEGLF

Query:  HGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIFCSVDNYSMS
           KG+RQGD LSPFLFVMVMEVLSRMLN  PQ F+FH  C KV+LTHLTFADDLMIFC+ D  S+S
Subjt:  HGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIFCSVDNYSMS

TYK19523.1 reverse transcriptase [Cucumis melo var. makuwa]1.9e-17353.89Show/hide
Query:  VKCRVVKDFLAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNIN
        +K + V DFL  S+VGFCC+LETRVR+ NFDS+S RFG+SW ++ +Y  SGVGR+WVMWK+NRF F T+   +QFI+G V                    
Subjt:  VKCRVVKDFLAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNIN

Query:  IERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE-----VSRT
                              V+ DFN IR H EA GG+P  G+MEDFDM IR+ADL++P ++ +WFTWTSK+ GSG+MRRLDR+L+ND+      +  
Subjt:  IERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE-----VSRT

Query:  QRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPLQISNALRSVIDPDGNRL
          V+ +   +H           +S  ++   VS +V +++NL  LK IL   FG+HI+++SE+V + K+ MD AQREL+   L ++    S++      +
Subjt:  QRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPLQISNALRSVIDPDGNRL

Query:  TNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFKGAWTVVGEDFYD-------
        ++HD V Q+ VNYF NSLGSQ IGYREL+  I+DIVQF W+EECCQALQ PI REEV RVLF MDSGKAPGPDG+S  FFKGAW+V+GEDF D       
Subjt:  TNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFKGAWTVVGEDFYD-------

Query:  --------------------------DFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQ
                                  DFRPISCCNV+YKCIS+I  DRLRVWLPSF+S  QS FI GRSII+NILLC ELVGGYH+N+GKPRCT+KVDLQ
Subjt:  --------------------------DFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQ

Query:  KADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAK
        KA D VNWDFLFGL I+I  PL+FVSW+ ACVT P FSI+IN SLEG FHGRKG+RQGD LS FLFVMVMEVLSRMLN  PQ FQFH  C K
Subjt:  KADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAK

XP_031737043.1 uncharacterized protein LOC116402131 [Cucumis sativus]5.6e-17862.89Show/hide
Query:  MSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE------------------
        M++ISAGWRGSG+V+GDFNTIRLH EAFGGA   GDME+ DM IREADL++P ++ +WFTWT+KIHG GLMRRLDRILVNDE                  
Subjt:  MSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE------------------

Query:  ----------VSRTQRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLV-----------KDTMDRAQ
                    R+Q VVSF FFNHWV+E+S MDVVSS WTKDTRVS IVNIV+NLRNLKSIL +HFGKHI+TISEDV L            K T  R  
Subjt:  ----------VSRTQRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLV-----------KDTMDRAQ

Query:  RELE------INPLQISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKA
        R +       +   Q  NAL S+IDPDGNRLTNHDQV+                                      QALQ PIGREEV R LF MDSGKA
Subjt:  RELE------INPLQISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKA

Query:  PGPDGYSFCFFKGAWTVV-------------------GEDFYDDFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGG
        PGPDGYS  FFKGAWTV                    G D  +DFRPISCCNVIYKCISRI  DRL  WLPSFVSG QS FIPGRSIIDNILLC ELVGG
Subjt:  PGPDGYSFCFFKGAWTVV-------------------GEDFYDDFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGG

Query:  YHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQD
        YH++ G PRCT+KVDLQKA D VNWDFLFGL+IAI + +RFVSWVRAC T   FSI+IN SLEG FHGRKGLRQGD LS FLFVMVMEVLSRMLN PPQ+
Subjt:  YHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQD

Query:  FQFHQFCAKVRLTHLTFADDLMIFCSVDNYSMSFIKETI
        FQFHQFC KV+LTHLTFADDLMIFC+ DNYSMSFIKETI
Subjt:  FQFHQFCAKVRLTHLTFADDLMIFCSVDNYSMSFIKETI

TrEMBL top hitse value%identityAlignment
A0A5A7SPE5 Reverse transcriptase domain-containing protein2.9e-17251.57Show/hide
Query:  LAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNINIERRVLWRR
        ++ S VGFCC LETRVR+ NFDS+S RF +SW ++ +Y  SGVGR+WVMWK+NRF F T+ + +QF++G +TDL+    VEV CVYASN NIERR+LW R
Subjt:  LAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNINIERRVLWRR

Query:  MSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE------------------
        + +I++ W   G+V+ DFN IR+H EAF G+P  G+MEDF++ IR+ADL++P ++G+WFTWTSK+ GSG++RRLDR+LVND+                  
Subjt:  MSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE------------------

Query:  ----------VSRTQRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPLQIS
                     + +VVSF FFNHWVE+ S ++VV+ +W++   VS +V +++NL  LK IL   FG+HI+ +SE+V +VK+ MD AQRE+        
Subjt:  ----------VSRTQRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPLQIS

Query:  NALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFKG-AWT
                                VNYF+NSLGSQ IGYRELS  I+DIVQF W+EECCQALQ PI REEV RVLF MDSGKAPGPDG+S       A T
Subjt:  NALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFKG-AWT

Query:  VV----GEDFYDDFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGL
        ++    G +  +DF PISC NV+YKCIS+I  DRLRVWLPSF+S  QS FIPGRSII+NILLC EL                                  
Subjt:  VV----GEDFYDDFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGL

Query:  MIAIVPLRFVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIFCSVDNYSM
                    +RACVT P F I+IN SLEG FHGRKG+RQGD LSPFLFVMVMEVLSRMLN  PQ FQFH  C KV+LTHLTFADDLMIFC+ D  S+
Subjt:  MIAIVPLRFVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIFCSVDNYSM

Query:  SFIKETI
         FI++ +
Subjt:  SFIKETI

A0A5A7TZS0 Reverse transcriptase domain-containing protein1.2e-20254.2Show/hide
Query:  FTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNINIERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPK
        ++ +Y  SGVGR+WVMWK+ RF F+T+ + ++F+ G +TDL+    VEV+CVYASN + ERR LWR + +I++ W   G+V+GDFN IR+H EAFGG+P 
Subjt:  FTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNINIERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPK

Query:  SGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE----------------------------VSRTQRVVSFCFFNHWVEETSSM
         G+ME+FD+ IR+ADL++P ++G+WFTWTSK+ GSG++RRLDR+LVNDE                                 RVVSF FFNHWVEE S +
Subjt:  SGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE----------------------------VSRTQRVVSFCFFNHWVEETSSM

Query:  DVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPLQ-----------------------------------
        +VV+ +W++   VS +V++++NL +LK IL   FG+HI+++SE+V + K+ MD AQRE+E NPL                                    
Subjt:  DVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPLQ-----------------------------------

Query:  -----------------ISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSG
                           N+L S++D DG+R+++HD V Q+ VNYF NSLGSQ IGYRELS  I+DIVQF W+EECCQALQ PI REEV RVLF MDSG
Subjt:  -----------------ISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSG

Query:  KAPGPDGYSFCFFKGAWTVVGEDF---------------------------------YDDFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPG
        KAPGPDG+S  F+KGAW+VVGEDF                                  +DFRPISCCNV+YKCIS+I  DRLR+WLPSF+S  QS FIPG
Subjt:  KAPGPDGYSFCFFKGAWTVVGEDF---------------------------------YDDFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPG

Query:  RSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFV
        RSII+NILLC ELVGGYH+N+GKPRCT+KVDLQKA D VNWDFLFGL+IAI  PL+FVSW+RACVT   FSI+IN SLEG F+GRKGLRQGD LSPFLFV
Subjt:  RSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFV

Query:  MVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIFCSVDNYSMSFIKETI
        MVMEVLSRMLN  PQ F+FH  C KV+LTHLTFADDLMIFC+ D  S+SFI+E +
Subjt:  MVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIFCSVDNYSMSFIKETI

A0A5A7UP65 Reverse transcriptase2.2e-17250.39Show/hide
Query:  VKCRVVKDFLAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNIN
        +K + V DFL  S+VGFCC+LETRVR+ NFDS+S RFG+SW ++ +Y  SGVGR+WVMWK+NRF F T+   +QFI+G V                    
Subjt:  VKCRVVKDFLAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNIN

Query:  IERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE---------
                              V+ DFN IR H EA GG+P  G+MEDFDM IR+ADL++P ++G+WFTWTSK+ GSG+MRRLDR+L+ND+         
Subjt:  IERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE---------

Query:  -------------------VSRTQRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRE
                             +  +VVSF  FNHWV++ S +                                 FG+HI+++SE+V + K+ MD AQRE
Subjt:  -------------------VSRTQRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRE

Query:  LEINPL------------------------QISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIG
        +E NP+                        +    L  V+D   +R+++HD V Q+ VNYF NSLGSQ IGYREL+  I+DIVQF W+EECCQALQ PI 
Subjt:  LEINPL------------------------QISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIG

Query:  REEVGRVLFPMDSGKAPGPDGYSFCFFKGAWTVVGEDFYD---------------------------------DFRPISCCNVIYKCISRIFVDRLRVWL
        REEV RVLF MDSGKAPGPDG+S  FFKGAW+V+GEDF D                                 DFRPISCCNV+YKCIS+I  DRLRVWL
Subjt:  REEVGRVLFPMDSGKAPGPDGYSFCFFKGAWTVVGEDFYD---------------------------------DFRPISCCNVIYKCISRIFVDRLRVWL

Query:  PSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRK
        PSF+S  QS FI GRSII+NILLC ELVGGYH+N+GKPRCT+KVDLQKA D VNWDFLFGL I+I  PL+FVSW+ ACVT P FSI+IN SLEG FHGRK
Subjt:  PSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRK

Query:  GLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAK
        G+RQGD LS FLFVMVMEVLSRMLN  PQ FQFH  C K
Subjt:  GLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAK

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein3.6e-19151.72Show/hide
Query:  GLNSLVKCRVVKDFLAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVY
        G+ S +K + V DFL  S+VGFCC LETRVR+ NFD +S RFG+SW ++ +Y  SGVGR+WV+WK+NRF F T  V +QF++G +TDL+    VEV CVY
Subjt:  GLNSLVKCRVVKDFLAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVY

Query:  ASNINIERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDEVSRT
        ASN NIERR+LWRR+ +I++ W    +V+GDFN IR+H+EAFGG+P  G+MEDFD+  R+ADL++P ++G+WFTWTSK+HGSG++RRLDRILVNDE    
Subjt:  ASNINIERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDEVSRT

Query:  QRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPL-----------------
            +       VE+ S ++VV+ +W +   VS +V++++NL+NLK  L   FG+HIQ+++E+V + K+ MDRAQRE+E NP+                 
Subjt:  QRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPL-----------------

Query:  -----------------------------------QISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQAL
                                              N+L S++D DG+R+++HD V Q+ VNYF+NSLGSQ IGYREL   I+DIVQF W+EECCQAL
Subjt:  -----------------------------------QISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQAL

Query:  QTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFKGAWTVVGEDFYD---------------------------------DFRPISCCNVIYKCISRIFVDR
        Q PI REEV RVLF MDSGKAPGPDG+S  FFKGAW+VV EDF D                                 +FRPISCCNVIYKCIS+I  DR
Subjt:  QTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFKGAWTVVGEDFYD---------------------------------DFRPISCCNVIYKCISRIFVDR

Query:  LRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAIVPLRFVSWVRACVTFPTFSIIINESLEGLF
        LRVWLPSF+   QS FIPGRSIIDNILLC ELV GYH+N+GKPRCT+KVDLQKA D VNWDFL                                     
Subjt:  LRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAIVPLRFVSWVRACVTFPTFSIIINESLEGLF

Query:  HGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIFCSVDNYSMS
           KG+RQGD LSPFLFVMVMEVLSRMLN  PQ F+FH  C KV+LTHLTFADDLMIFC+ D  S+S
Subjt:  HGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIFCSVDNYSMS

A0A5D3D7P6 Reverse transcriptase9.0e-17453.89Show/hide
Query:  VKCRVVKDFLAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNIN
        +K + V DFL  S+VGFCC+LETRVR+ NFDS+S RFG+SW ++ +Y  SGVGR+WVMWK+NRF F T+   +QFI+G V                    
Subjt:  VKCRVVKDFLAVSTVGFCCNLETRVRKENFDSISGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNIN

Query:  IERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE-----VSRT
                              V+ DFN IR H EA GG+P  G+MEDFDM IR+ADL++P ++ +WFTWTSK+ GSG+MRRLDR+L+ND+      +  
Subjt:  IERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDE-----VSRT

Query:  QRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPLQISNALRSVIDPDGNRL
          V+ +   +H           +S  ++   VS +V +++NL  LK IL   FG+HI+++SE+V + K+ MD AQREL+   L ++    S++      +
Subjt:  QRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPLQISNALRSVIDPDGNRL

Query:  TNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFKGAWTVVGEDFYD-------
        ++HD V Q+ VNYF NSLGSQ IGYREL+  I+DIVQF W+EECCQALQ PI REEV RVLF MDSGKAPGPDG+S  FFKGAW+V+GEDF D       
Subjt:  TNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFKGAWTVVGEDFYD-------

Query:  --------------------------DFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQ
                                  DFRPISCCNV+YKCIS+I  DRLRVWLPSF+S  QS FI GRSII+NILLC ELVGGYH+N+GKPRCT+KVDLQ
Subjt:  --------------------------DFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQ

Query:  KADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAK
        KA D VNWDFLFGL I+I  PL+FVSW+ ACVT P FSI+IN SLEG FHGRKG+RQGD LS FLFVMVMEVLSRMLN  PQ FQFH  C K
Subjt:  KADDFVNWDFLFGLMIAI-VPLRFVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAK

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein5.0e-2021.61Show/hide
Query:  TKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELE--INPLQISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIG
        +K +R   I  I   L+ +++       K +Q I+E      + +++  R L   I   +  N + ++ +  G+  T+  ++   +  Y+K+   ++   
Subjt:  TKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQTISEDVCLVKDTMDRAQRELE--INPLQISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIG

Query:  YRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFK-----------------GAWTVVGEDFY---------------
          E+ T ++        +E  ++L  PI   E+  ++  + + K+PGPDG++  F++                     ++   FY               
Subjt:  YRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFK-----------------GAWTVVGEDFY---------------

Query:  --DDFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLR
          ++FRPIS  N+  K +++I  +R++  +   +   Q  FIPG     NI   + ++   +    K    + +D +KA D +   F+   +  + +   
Subjt:  --DDFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLR

Query:  FVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIF
        ++  +RA    PT +II+N      F  + G RQG  LSP LF +V+EVL+R +    +         +V+L+   FADD++++
Subjt:  FVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIF

P08548 LINE-1 reverse transcriptase homolog7.2e-1921.46Show/hide
Query:  TRVSAIVNIVKNLRNLKSI--LCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPLQISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRE
        T++ A +N ++N R ++ I    S F + I  I + +      + R +R        + + + S+ + +    T+  ++ +++  Y+K     +    +E
Subjt:  TRVSAIVNIVKNLRNLKSI--LCSHFGKHIQTISEDVCLVKDTMDRAQRELEINPLQISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRE

Query:  LSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFK-----------------GAWTVVGEDFY-----------------D
        +   +E       +++  + L  PI   E+   +  +   K+PGPDG++  F++                     ++   FY                 +
Subjt:  LSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFK-----------------GAWTVVGEDFY-----------------D

Query:  DFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVS
        ++RPIS  N+  K +++I  +R++  +   +   Q  FIPG     NI   + ++   +    K    + +D +KA D +   F+   +  I +   F+ 
Subjt:  DFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVS

Query:  WVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIFCSVDNYSMSFIKETI
         + A  + PT +II+N      F  R G RQG  LSP LF +VMEVL+  +         H    +++L+   FADD++++      S + + E I
Subjt:  WVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIFCSVDNYSMSFIKETI

P11369 LINE-1 retrotransposable element ORF2 protein7.4e-1621.05Show/hide
Query:  LRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSF-----------
        +  + +  G+  T+ +++   + +++K    ++     E+   ++        ++    L +PI  +E+  V+  + + K+PGPDG+S            
Subjt:  LRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSF-----------

Query:  ------------------CFFKGAWTVVGEDFYD-----DFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMN
                           F++   T++ +   D     +FRPIS  N+  K +++I  +R++  + + +   Q  FIPG     NI   + ++   +  
Subjt:  ------------------CFFKGAWTVVGEDFYD-----DFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMN

Query:  TGKPRCTMKVDLQKADDFVNWDFLFGLM-IAIVPLRFVSWVRACVTFPTFSIIIN-ESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQF
          K    + +D +KA D +   F+  ++  + +   +++ ++A  + P  +I +N E LE +   + G RQG  LSP+LF +V+EVL+R +    +    
Subjt:  TGKPRCTMKVDLQKADDFVNWDFLFGLM-IAIVPLRFVSWVRACVTFPTFSIIIN-ESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQF

Query:  HQFCAKVRLTHLTFADDLMIFCS
             +V+++ L  ADD++++ S
Subjt:  HQFCAKVRLTHLTFADDLMIFCS

P14381 Transposon TX1 uncharacterized 149 kDa protein2.3e-0926.11Show/hide
Query:  DFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVS
        ++RP+S  +  YK +++    RL+  L   +   QS  +PGR+I DN+ L  +L+  +   TG     + +D +KA D V+  +L G + A     +FV 
Subjt:  DFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFLFGLMIAI-VPLRFVS

Query:  WVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMI
        +++         + IN SL       +G+RQG  LS  L+ + +E    +L          +    +R+    +ADD+++
Subjt:  WVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMI

Q03278 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)1.3e-0426.26Show/hide
Query:  FRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFV-NWDFLFGLMIAIVPLRFVSW
        FRP+S  +V  +   RI  +  R+     +  +Q  FI    + +N  L   ++    M   K      +D++KA D V +   L  L    +PL   ++
Subjt:  FRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFV-NWDFLFGLMIAIVPLRFVSW

Query:  VRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMI
        +          + + ++        +G+RQGD LSP LF  VM+ + R L   P++  F     K+    L FADDL++
Subjt:  VRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMI

Arabidopsis top hitse value%identityAlignment
AT1G40390.1 DNAse I-like superfamily protein2.2e-0729.59Show/hide
Query:  NINIERRVLWRRMSDISAG---WRGSGMVLGDFN---TIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVN
        N   ERR LW  ++ +SA         +V+GDFN   ++  HY           +ED    +R++DL+    +G  +TW++    + ++R+LDR +VN
Subjt:  NINIERRVLWRRMSDISAG---WRGSGMVLGDFN---TIRLHYEAFGGAPKSGDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVN

AT1G43760.1 DNAse I-like superfamily protein4.1e-0927.5Show/hide
Query:  QISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGS-QNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFKG
        Q  N ++ +   D  R+ N  QV +++V Y+ + LGS  +I   +    I+DI  F   +     L      +E+   +F M   KAPGPD ++  FF  
Subjt:  QISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGS-QNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGKAPGPDGYSFCFFKG

Query:  AWTVV---------------------------------GEDFYDDFRPISCCNVIYKCIS
        +W VV                                 G D    FRP+SCC V+YK I+
Subjt:  AWTVV---------------------------------GEDFYDDFRPISCCNVIYKCIS

AT4G20520.1 RNA binding;RNA-directed DNA polymerases3.2e-0635.62Show/hide
Query:  VDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTG-KPRCTMKVDLQKADDFVNWDFLFGLMIA
        V+RL+  + + +   Q+ FIPGR   DNI+   E V       G K    +K+DL+KA D + WD+L   +I+
Subjt:  VDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTG-KPRCTMKVDLQKADDFVNWDFLFGLMIA

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)2.7e-0540.3Show/hide
Query:  IINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCA---KVRLTHLTFADD
        IIN + +GL    +GLRQGD LSP+LF++  EVLS +     +  +           R+ HL FADD
Subjt:  IINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCA---KVRLTHLTFADD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTCTCCTACTCTTTTTCCTATTACAAGAAGGAAAGAAGGATAGGAAGATCTCCGATTGGTGGTTTCCCAATTTGGAAACTGCTTTGTCAATTCAGAGACTTCAT
CGAAAGCACATTGGCCCTTTCTTCGGCGTTTTGGGACAAAACCAAAAAGTTGAGTCTAGGGCATCACTGTTTGGCTTTTGTGGGCAAGAAACAACAATATCACTCAAAAT
CAGACAGCCCAACCACCCAACAGTTGGATGTGAACTTTCGAGGCCTCCGACATAGTTCTAAGTTCGGTCGTCTCTTTCTAGGCACCTTGGCCCTTCCTTTGGCATTTTGG
GACAGAACAAAAAAATTGAGTCTAGGGCATCACCGTTCGACTTTTGTGGGCAAGAAACTTCAATATCACTTAAAATCGACCACACAGCAAATCGATGTCATCTTTCGAGG
CGTCCGACACCGTTCTAAGTATGGTCGTCTCTTTCTAGGCACATTGGCCATTTCTTCGGCGTTTTGGGACGAAACCAAAAAACTGAGTTTGGGGCATCACCGTTCGGCTT
TTGTTGGAAACAAACATCAGTATCACTCAAAATCGGACCGCCCAGCACATTGGCCATTTCTTCGTCGTTTTGGGACGGAACGAAAAAAATTGAGTCTCGGGCATCACCGT
TCGGCTTTTATGGGCAAGAAACTTCACTATCATTTAAAATTGGACCGCCTAGCAGCACATTGGCCCTTCGGCGTTTGGGGACGGAACCAAAAAATTGAGTCTGGGCTTCA
TCGTTCGGCTTTGGCACGTTGGCCCTTTCTTCGGCGTTTTTCAATGAAACCAAAAACCTCAGACTATGGCATCACCATTCGGCTTTTCTGGGCAAGAAACTTCAACATCA
TTCAAAATCGGACAACCCAGTTGTTAGATGTGAACTTCGAGGCCTTCGACTCCGCATGTTGGCCCTTTCTTCGACGTTTTGGGACGAAAGCAAAAAACTCAGTCTGGGGC
ATCACCGTTCGGCTTTCGTGGGCGAGAAACTTTAATATCACTCAAAATCGGACCGCCCAGCACGTTGGCCCTTTCTTCGACGTTTTGGGACGGAACCAAAAAACTGAGTC
TGGGGCATCACTGTTTTGCTTTTCTGGGAAAGATACTTCAACGTTCCTCTGGGAGATGCAGCTCCCATCCGACCTTATGATTAGTTGGTGTTCATGGAATGTGCAGGGTC
TTAATAGCCTTGTAAAGTGTAGAGTGGTGAAGGATTTTTTAGCCGTGTCTACGGTGGGTTTCTGTTGCAATCTGGAGACTAGAGTTCGAAAGGAGAATTTTGACTCGATC
TCTGGTAGGTTTGGTGATTCGTGGGGGTTCACTAGTAACTACCGCAAAAGTGGAGTTGGTCGGATGTGGGTTATGTGGAAACGTAATAGATTCGTGTTCATGACTTACGA
GGTTGCCGATCAGTTTATTTCTGGTTTGGTAACAGATTTAATCTTATGGGAGAGTGTAGAGGTTTTGTGTGTGTATGCCTCTAATATTAATATCGAGAGACGTGTTTTAT
GGCGGCGTATGTCTGATATTTCTGCTGGATGGAGAGGGTCGGGTATGGTCTTGGGGGATTTTAATACCATTAGACTCCATTATGAAGCCTTTGGGGGAGCTCCTAAGTCG
GGGGATATGGAGGATTTTGACATGGTTATTCGAGAGGCGGACCTTATTCAACCCTTGATTAAGGGGAGTTGGTTTACCTGGACTAGTAAGATCCATGGGTCTGGTTTGAT
GAGGAGACTTGATCGTATCCTAGTGAATGATGAGGTCTCACGAACTCAGCGGGTGGTCTCTTTTTGTTTCTTTAACCATTGGGTTGAAGAAACTTCCTCAATGGATGTTG
TTTCCTCTGTTTGGACCAAAGATACTAGAGTTTCTGCAATTGTGAATATTGTGAAGAACTTAAGAAATCTCAAGTCGATTCTTTGCAGCCATTTTGGTAAGCATATCCAG
ACCATCAGTGAGGATGTTTGTCTTGTCAAGGATACCATGGATCGAGCTCAGAGAGAGCTGGAGATTAACCCTCTGCAGATCAGTAATGCTTTGCGATCAGTTATTGATCC
AGATGGTAATCGGTTGACAAACCATGATCAGGTGACTCAAGTGGTAGTAAATTATTTCAAAAATAGTCTGGGTTCTCAGAATATTGGCTACAGAGAGCTTTCTACTAGTA
TTGAGGATATTGTTCAGTTTAGTTGGACTGAGGAGTGCTGCCAGGCCCTTCAGACGCCAATTGGCAGGGAGGAGGTGGGACGTGTTCTATTTCCCATGGATAGTGGAAAG
GCTCCTGGCCCTGATGGGTATTCGTTTTGCTTCTTCAAAGGAGCTTGGACGGTGGTTGGAGAGGATTTCTATGATGACTTTAGGCCTATCTCTTGTTGTAACGTTATTTA
CAAGTGCATTTCAAGAATATTCGTTGATAGGCTTCGTGTGTGGCTTCCTTCCTTTGTAAGTGGAAAGCAGTCAGATTTCATCCCTGGGAGGAGCATTATTGACAATATAC
TTCTTTGTCTGGAGCTTGTAGGGGGTTACCATATGAACACAGGTAAACCTCGATGCACTATGAAGGTTGACCTCCAAAAAGCAGATGATTTTGTTAATTGGGATTTCCTC
TTTGGCCTAATGATTGCTATTGTGCCTTTAAGATTTGTGAGTTGGGTTCGAGCTTGTGTCACCTTTCCTACGTTCTCCATTATAATTAATGAATCGTTGGAAGGTCTTTT
CCATGGAAGGAAAGGACTTAGACAAGGTGATCATTTATCCCCGTTCTTATTTGTGATGGTCATGGAGGTGCTATCTCGCATGTTGAACAGCCCGCCTCAGGATTTTCAAT
TCCACCAGTTTTGTGCGAAGGTCAGGTTAACTCATCTTACTTTTGCGGATGATCTGATGATCTTTTGTTCTGTTGATAATTATTCTATGAGTTTCATAAAAGAGACTATT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCTCTCCTACTCTTTTTCCTATTACAAGAAGGAAAGAAGGATAGGAAGATCTCCGATTGGTGGTTTCCCAATTTGGAAACTGCTTTGTCAATTCAGAGACTTCAT
CGAAAGCACATTGGCCCTTTCTTCGGCGTTTTGGGACAAAACCAAAAAGTTGAGTCTAGGGCATCACTGTTTGGCTTTTGTGGGCAAGAAACAACAATATCACTCAAAAT
CAGACAGCCCAACCACCCAACAGTTGGATGTGAACTTTCGAGGCCTCCGACATAGTTCTAAGTTCGGTCGTCTCTTTCTAGGCACCTTGGCCCTTCCTTTGGCATTTTGG
GACAGAACAAAAAAATTGAGTCTAGGGCATCACCGTTCGACTTTTGTGGGCAAGAAACTTCAATATCACTTAAAATCGACCACACAGCAAATCGATGTCATCTTTCGAGG
CGTCCGACACCGTTCTAAGTATGGTCGTCTCTTTCTAGGCACATTGGCCATTTCTTCGGCGTTTTGGGACGAAACCAAAAAACTGAGTTTGGGGCATCACCGTTCGGCTT
TTGTTGGAAACAAACATCAGTATCACTCAAAATCGGACCGCCCAGCACATTGGCCATTTCTTCGTCGTTTTGGGACGGAACGAAAAAAATTGAGTCTCGGGCATCACCGT
TCGGCTTTTATGGGCAAGAAACTTCACTATCATTTAAAATTGGACCGCCTAGCAGCACATTGGCCCTTCGGCGTTTGGGGACGGAACCAAAAAATTGAGTCTGGGCTTCA
TCGTTCGGCTTTGGCACGTTGGCCCTTTCTTCGGCGTTTTTCAATGAAACCAAAAACCTCAGACTATGGCATCACCATTCGGCTTTTCTGGGCAAGAAACTTCAACATCA
TTCAAAATCGGACAACCCAGTTGTTAGATGTGAACTTCGAGGCCTTCGACTCCGCATGTTGGCCCTTTCTTCGACGTTTTGGGACGAAAGCAAAAAACTCAGTCTGGGGC
ATCACCGTTCGGCTTTCGTGGGCGAGAAACTTTAATATCACTCAAAATCGGACCGCCCAGCACGTTGGCCCTTTCTTCGACGTTTTGGGACGGAACCAAAAAACTGAGTC
TGGGGCATCACTGTTTTGCTTTTCTGGGAAAGATACTTCAACGTTCCTCTGGGAGATGCAGCTCCCATCCGACCTTATGATTAGTTGGTGTTCATGGAATGTGCAGGGTC
TTAATAGCCTTGTAAAGTGTAGAGTGGTGAAGGATTTTTTAGCCGTGTCTACGGTGGGTTTCTGTTGCAATCTGGAGACTAGAGTTCGAAAGGAGAATTTTGACTCGATC
TCTGGTAGGTTTGGTGATTCGTGGGGGTTCACTAGTAACTACCGCAAAAGTGGAGTTGGTCGGATGTGGGTTATGTGGAAACGTAATAGATTCGTGTTCATGACTTACGA
GGTTGCCGATCAGTTTATTTCTGGTTTGGTAACAGATTTAATCTTATGGGAGAGTGTAGAGGTTTTGTGTGTGTATGCCTCTAATATTAATATCGAGAGACGTGTTTTAT
GGCGGCGTATGTCTGATATTTCTGCTGGATGGAGAGGGTCGGGTATGGTCTTGGGGGATTTTAATACCATTAGACTCCATTATGAAGCCTTTGGGGGAGCTCCTAAGTCG
GGGGATATGGAGGATTTTGACATGGTTATTCGAGAGGCGGACCTTATTCAACCCTTGATTAAGGGGAGTTGGTTTACCTGGACTAGTAAGATCCATGGGTCTGGTTTGAT
GAGGAGACTTGATCGTATCCTAGTGAATGATGAGGTCTCACGAACTCAGCGGGTGGTCTCTTTTTGTTTCTTTAACCATTGGGTTGAAGAAACTTCCTCAATGGATGTTG
TTTCCTCTGTTTGGACCAAAGATACTAGAGTTTCTGCAATTGTGAATATTGTGAAGAACTTAAGAAATCTCAAGTCGATTCTTTGCAGCCATTTTGGTAAGCATATCCAG
ACCATCAGTGAGGATGTTTGTCTTGTCAAGGATACCATGGATCGAGCTCAGAGAGAGCTGGAGATTAACCCTCTGCAGATCAGTAATGCTTTGCGATCAGTTATTGATCC
AGATGGTAATCGGTTGACAAACCATGATCAGGTGACTCAAGTGGTAGTAAATTATTTCAAAAATAGTCTGGGTTCTCAGAATATTGGCTACAGAGAGCTTTCTACTAGTA
TTGAGGATATTGTTCAGTTTAGTTGGACTGAGGAGTGCTGCCAGGCCCTTCAGACGCCAATTGGCAGGGAGGAGGTGGGACGTGTTCTATTTCCCATGGATAGTGGAAAG
GCTCCTGGCCCTGATGGGTATTCGTTTTGCTTCTTCAAAGGAGCTTGGACGGTGGTTGGAGAGGATTTCTATGATGACTTTAGGCCTATCTCTTGTTGTAACGTTATTTA
CAAGTGCATTTCAAGAATATTCGTTGATAGGCTTCGTGTGTGGCTTCCTTCCTTTGTAAGTGGAAAGCAGTCAGATTTCATCCCTGGGAGGAGCATTATTGACAATATAC
TTCTTTGTCTGGAGCTTGTAGGGGGTTACCATATGAACACAGGTAAACCTCGATGCACTATGAAGGTTGACCTCCAAAAAGCAGATGATTTTGTTAATTGGGATTTCCTC
TTTGGCCTAATGATTGCTATTGTGCCTTTAAGATTTGTGAGTTGGGTTCGAGCTTGTGTCACCTTTCCTACGTTCTCCATTATAATTAATGAATCGTTGGAAGGTCTTTT
CCATGGAAGGAAAGGACTTAGACAAGGTGATCATTTATCCCCGTTCTTATTTGTGATGGTCATGGAGGTGCTATCTCGCATGTTGAACAGCCCGCCTCAGGATTTTCAAT
TCCACCAGTTTTGTGCGAAGGTCAGGTTAACTCATCTTACTTTTGCGGATGATCTGATGATCTTTTGTTCTGTTGATAATTATTCTATGAGTTTCATAAAAGAGACTATT
TAG
Protein sequenceShow/hide protein sequence
MILSYSFSYYKKERRIGRSPIGGFPIWKLLCQFRDFIESTLALSSAFWDKTKKLSLGHHCLAFVGKKQQYHSKSDSPTTQQLDVNFRGLRHSSKFGRLFLGTLALPLAFW
DRTKKLSLGHHRSTFVGKKLQYHLKSTTQQIDVIFRGVRHRSKYGRLFLGTLAISSAFWDETKKLSLGHHRSAFVGNKHQYHSKSDRPAHWPFLRRFGTERKKLSLGHHR
SAFMGKKLHYHLKLDRLAAHWPFGVWGRNQKIESGLHRSALARWPFLRRFSMKPKTSDYGITIRLFWARNFNIIQNRTTQLLDVNFEAFDSACWPFLRRFGTKAKNSVWG
ITVRLSWARNFNITQNRTAQHVGPFFDVLGRNQKTESGASLFCFSGKDTSTFLWEMQLPSDLMISWCSWNVQGLNSLVKCRVVKDFLAVSTVGFCCNLETRVRKENFDSI
SGRFGDSWGFTSNYRKSGVGRMWVMWKRNRFVFMTYEVADQFISGLVTDLILWESVEVLCVYASNINIERRVLWRRMSDISAGWRGSGMVLGDFNTIRLHYEAFGGAPKS
GDMEDFDMVIREADLIQPLIKGSWFTWTSKIHGSGLMRRLDRILVNDEVSRTQRVVSFCFFNHWVEETSSMDVVSSVWTKDTRVSAIVNIVKNLRNLKSILCSHFGKHIQ
TISEDVCLVKDTMDRAQRELEINPLQISNALRSVIDPDGNRLTNHDQVTQVVVNYFKNSLGSQNIGYRELSTSIEDIVQFSWTEECCQALQTPIGREEVGRVLFPMDSGK
APGPDGYSFCFFKGAWTVVGEDFYDDFRPISCCNVIYKCISRIFVDRLRVWLPSFVSGKQSDFIPGRSIIDNILLCLELVGGYHMNTGKPRCTMKVDLQKADDFVNWDFL
FGLMIAIVPLRFVSWVRACVTFPTFSIIINESLEGLFHGRKGLRQGDHLSPFLFVMVMEVLSRMLNSPPQDFQFHQFCAKVRLTHLTFADDLMIFCSVDNYSMSFIKETI