; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G15880 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G15880
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPMD domain-containing protein
Genome locationChr6:14295294..14296448
RNA-Seq ExpressionCSPI06G15880
SyntenyCSPI06G15880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]3.6e-4077.24Show/hide
Query:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVR--AAKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK
        QSTKD QL E KGFVKTLR+DENRIL ET+T +R L RLSAKEAKLEAKLK+VR  + KLS +I KN++ELKQKQ EISKTCEEIDKL+CA I+GD DAK
Subjt:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVR--AAKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK

Query:  MLSTLRESLESTLEELKNFKWTP
        MLS LRESLE+TLEELKN KWTP
Subjt:  MLSTLRESLESTLEELKNFKWTP

KAA0060137.1 uncharacterized protein E6C27_scaffold39G00580 [Cucumis melo var. makuwa]1.1e-4178.86Show/hide
Query:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVR--AAKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK
        QSTKD QL EAKGFVKTLR+DEN IL ET+T +R L RLSAKEAKLEAKLK+VR  + KLSDII KN++ELKQKQHEISKTCEEIDK ECAPI+ D+DAK
Subjt:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVR--AAKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK

Query:  MLSTLRESLESTLEELKNFKWTP
        MLS LRESL++TLEELKN KWTP
Subjt:  MLSTLRESLESTLEELKNFKWTP

TYK21862.1 uncharacterized protein E5676_scaffold836G00150 [Cucumis melo var. makuwa]3.9e-4283.05Show/hide
Query:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRA--AKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK
        QSTKD QL EAKGFVKTLRVDENRIL ET+T +RCL RLSAKEAKLEAKLK VR    KLS II KN++ELKQKQHEISKTCEEIDKLECAPI+GD+DAK
Subjt:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRA--AKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK

Query:  MLSTLRESLESTLEELKN
        MLS LRESLE+TLEELKN
Subjt:  MLSTLRESLESTLEELKN

XP_016903650.1 PREDICTED: uncharacterized protein LOC103504169 [Cucumis melo]2.2e-4582.93Show/hide
Query:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRA--AKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK
        QSTKD QL EAKGFVKTLRVDENRIL ET+T +RCL RLSAKEAKLEAKLK VR    KLS II KN++ELKQKQHEISKTCEEIDKLECAPI+GD+DAK
Subjt:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRA--AKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK

Query:  MLSTLRESLESTLEELKNFKWTP
        MLS LRESLE+TLEELKN KWTP
Subjt:  MLSTLRESLESTLEELKNFKWTP

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]6.3e-5396.75Show/hide
Query:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRA--AKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK
        QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKR LTRLSAKEAKLEAKLKMVRA  AKLS IIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK
Subjt:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRA--AKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK

Query:  MLSTLRESLESTLEELKNFKWTP
        MLSTLRESLESTLEELKNFKWTP
Subjt:  MLSTLRESLESTLEELKNFKWTP

TrEMBL top hitse value%identityAlignment
A0A1S4E6N4 uncharacterized protein LOC1035041691.1e-4582.93Show/hide
Query:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRA--AKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK
        QSTKD QL EAKGFVKTLRVDENRIL ET+T +RCL RLSAKEAKLEAKLK VR    KLS II KN++ELKQKQHEISKTCEEIDKLECAPI+GD+DAK
Subjt:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRA--AKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK

Query:  MLSTLRESLESTLEELKNFKWTP
        MLS LRESLE+TLEELKN KWTP
Subjt:  MLSTLRESLESTLEELKNFKWTP

A0A5A7SJ85 Uncharacterized protein1.7e-4077.24Show/hide
Query:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVR--AAKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK
        QSTKD QL E KGFVKTLR+DENRIL ET+T +R L RLSAKEAKLEAKLK+VR  + KLS +I KN++ELKQKQ EISKTCEEIDKL+CA I+GD DAK
Subjt:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVR--AAKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK

Query:  MLSTLRESLESTLEELKNFKWTP
        MLS LRESLE+TLEELKN KWTP
Subjt:  MLSTLRESLESTLEELKNFKWTP

A0A5A7SWI5 Uncharacterized protein1.1e-4582.93Show/hide
Query:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRA--AKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK
        QSTKD QL EAKGFVKTLRVDENRIL ET+T +RCL RLSAKEAKLEAKLK VR    KLS II KN++ELKQKQHEISKTCEEIDKLECAPI+GD+DAK
Subjt:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRA--AKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK

Query:  MLSTLRESLESTLEELKNFKWTP
        MLS LRESLE+TLEELKN KWTP
Subjt:  MLSTLRESLESTLEELKNFKWTP

A0A5A7UZR8 Uncharacterized protein5.4e-4278.86Show/hide
Query:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVR--AAKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK
        QSTKD QL EAKGFVKTLR+DEN IL ET+T +R L RLSAKEAKLEAKLK+VR  + KLSDII KN++ELKQKQHEISKTCEEIDK ECAPI+ D+DAK
Subjt:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVR--AAKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK

Query:  MLSTLRESLESTLEELKNFKWTP
        MLS LRESL++TLEELKN KWTP
Subjt:  MLSTLRESLESTLEELKNFKWTP

A0A5D3DE43 Uncharacterized protein1.9e-4283.05Show/hide
Query:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRA--AKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK
        QSTKD QL EAKGFVKTLRVDENRIL ET+T +RCL RLSAKEAKLEAKLK VR    KLS II KN++ELKQKQHEISKTCEEIDKLECAPI+GD+DAK
Subjt:  QSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRA--AKLSDIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK

Query:  MLSTLRESLESTLEELKN
        MLS LRESLE+TLEELKN
Subjt:  MLSTLRESLESTLEELKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTGATGAACGACTTGTGGAGAAAATTGAGGGAGGGACAAAACGCTTGGTGGATAATTTGTCTCTTTCTACACGATTTAAACANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTCCAATCAACTAAGGATGTTCAGTTAACGGAGGCAAAAGGTTTTGTGAAGACTCTGCGAGTTGATGAGAATCGTATATTGGCAGAGACTAACA
CTGCTAAACGTTGTCTTACACGACTGTCCGCCAAGGAGGCTAAACTAGAGGCAAAACTAAAGATGGTGCGGGCCGCTAAACTTTCTGACATAATTTTCAAGAACGACCTA
GAGCTGAAGCAGAAGCAACATGAGATTTCGAAGACTTGTGAGGAAATTGACAAACTCGAATGTGCCCCGATCGTTGGAGATATTGATGCTAAAATGCTATCAACACTTCG
TGAATCTTTAGAAAGCACACTAGAGGAGCTGAAGAACTTTAAATGGACTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTGATGAACGACTTGTGGAGAAAATTGAGGGAGGGACAAAACGCTTGGTGGATAATTTGTCTCTTTCTACACGATTTAAACANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTCCAATCAACTAAGGATGTTCAGTTAACGGAGGCAAAAGGTTTTGTGAAGACTCTGCGAGTTGATGAGAATCGTATATTGGCAGAGACTAACA
CTGCTAAACGTTGTCTTACACGACTGTCCGCCAAGGAGGCTAAACTAGAGGCAAAACTAAAGATGGTGCGGGCCGCTAAACTTTCTGACATAATTTTCAAGAACGACCTA
GAGCTGAAGCAGAAGCAACATGAGATTTCGAAGACTTGTGAGGAAATTGACAAACTCGAATGTGCCCCGATCGTTGGAGATATTGATGCTAAAATGCTATCAACACTTCG
TGAATCTTTAGAAAGCACACTAGAGGAGCTGAAGAACTTTAAATGGACTCCATGA
Protein sequenceShow/hide protein sequence
MKLMNDLWRKLREGQNAWWIICLFLHDLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRAAKLSDIIFKNDL
ELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP