CuGenDBv2

Gene ID	CSPI06G15930
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	SWIM-type domain-containing protein
Genome location	Chr6:14318218..14318619
RNA-Seq Expression	CSPI06G15930
Synteny	CSPI06G15930
Gene Ontology terms	GO:0048507 - meristem development (biological process) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR004332 - Transposase, MuDR, plant

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044308.1 uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa]

2.4e-55

79.23

Show/hide

Query:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP
        M+FD KE+L LA K+YCVTQHYEIVV +SNQ++W+VRCKQWSNGCNWRLR ++RKSHGLFEI++L+GEHSCLYSNLTQD SQLDSNF S+QIQNIV+ DP
Subjt:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP

Query:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK
        SVTVSVL+E+IKQQYGY VKY RVWQAK+K
Subjt:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK

TYK02543.1 uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa]

5.3e-55

78.46

Show/hide

Query:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP
        M+FD KE+L LA K+YCVTQHYEIVV +SNQ++W+VRCKQWSNGCNWRLR ++RKSHGLFEI++L+GEHSCLYSNLTQD SQLDSNF S++IQNIV+ DP
Subjt:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP

Query:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK
        SVTVSVL+E+IKQQYGY VKY RVWQAK+K
Subjt:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK

XP_031737534.1 uncharacterized protein LOC116402427 [Cucumis sativus]

2.4e-60

86.15

Show/hide

Query:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP
        MIFD KE+L+LA KRYCVTQHYEIVV +SNQHLWN+RCKQW+NGCNWRLR TKRKSHGLFEITKLQGEHSCLYSNLTQD SQLDSNF SVQIQN+VK DP
Subjt:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP

Query:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK
        ++TVSVL+EIIKQQYGY VKYG+VWQAKKK
Subjt:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK

XP_031741740.1 uncharacterized protein LOC116403936 [Cucumis sativus]

2.1e-59

86.92

Show/hide

Query:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP
        MIFD KE+LLLA KRYCVTQHYEIVV +SNQHLWN+RCKQWSNGC WRLRATKRKSHGLFEITKLQ EHSCLYSNLTQD SQL SNF SVQIQN++K DP
Subjt:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP

Query:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK
        ++TVSVLVEIIKQQYGYNVKYGRVWQ KKK
Subjt:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK

XP_031742190.1 uncharacterized protein LOC116404107 [Cucumis sativus]

3.8e-61

88.46

Show/hide

Query:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP
        MIFD KE+L+LA KRYCVTQHYEIVV  SNQHLWN+RCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQD SQLDSNF SVQIQN+VK DP
Subjt:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP

Query:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK
        ++TV VLVEIIKQQYGY+VKYGRVWQAKKK
Subjt:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BS22 uncharacterized protein LOC103492881

2.2e-54

77.69

Show/hide

Query:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP
        M+FD KE+L LA K+YCVTQHYEIVV +SNQ++W+VRCKQWSN CNWRLR ++RKSHGLFEI++L+GEHSCLYSNLTQD SQLDSNF S++IQNIV+ DP
Subjt:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP

Query:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK
        SVTVSVL+E+IKQQYGY VKY RVWQAK+K
Subjt:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK

A0A5A7SLM1 Uncharacterized protein

1.4e-53

76.15

Show/hide

Query:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP
        M+FD KE+L LA K+YCVTQHY+IVV +SNQ++W+VRCKQWSNGCNWRLR ++RKSHGLFEI++L+GEHSCLYSNLTQD SQLDSNF S++IQNIV+ D 
Subjt:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP

Query:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK
        SVT+SVL+E+IKQQYGY VKY RVWQAK+K
Subjt:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK

A0A5A7TN56 SWIM-type domain-containing protein

1.1e-55

79.23

Show/hide

Query:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP
        M+FD KE+L LA K+YCVTQHYEIVV +SNQ++W+VRCKQWSNGCNWRLR ++RKSHGLFEI++L+GEHSCLYSNLTQD SQLDSNF S+QIQNIV+ DP
Subjt:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP

Query:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK
        SVTVSVL+E+IKQQYGY VKY RVWQAK+K
Subjt:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK

A0A5D3BS92 SWIM-type domain-containing protein

2.5e-55

78.46

Show/hide

Query:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP
        M+FD KE+L LA K+YCVTQHYEIVV +SNQ++W+VRCKQWSNGCNWRLR ++RKSHGLFEI++L+GEHSCLYSNLTQD SQLDSNF S++IQNIV+ DP
Subjt:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP

Query:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK
        SVTVSVL+E+IKQQYGY VKY RVWQAK+K
Subjt:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK

A0A5D3C124 Uncharacterized protein

1.3e-54

76.92

Show/hide

Query:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP
        M+FD KE+L LA K+YCVTQHYEIVV +SNQ++W+VRCKQWSNGCNWRLR ++RKSHGLFEI++L+GEHSCLYSNLTQD SQLDSNF S++IQNI++ DP
Subjt:  MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDP

Query:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK
        SVTVSVL E+IKQQYGY VKY RVWQ K+K
Subjt:  SVTVSVLVEIIKQQYGYNVKYGRVWQAKKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G64255.1 MuDR family transposase

3.3e-07

32.08

Show/hide

Query:  VVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDPSVTVSVLVEIIKQQYGYNVKYGRV
        VV ++ +  +   C +W   C W L A + K HGL EI K  G H+C +  + +D     S F + +I+  V+  P+ T+S L +  K++ GY ++   V
Subjt:  VVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDPSVTVSVLVEIIKQQYGYNVKYGRV

Query:  WQAKKK
          AK+K
Subjt:  WQAKKK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATCTTTGACTATAAGGAAAATCTTTTGTTGGCTGGTAAGAGGTACTGTGTGACACAACACTATGAAATTGTTGTAACCGATTCAAACCAACATTTGTGGAATGTTCG
ATGCAAACAGTGGAGTAATGGCTGCAACTGGAGGTTACGTGCTACTAAGCGTAAGAGCCACGGATTGTTTGAAATCACTAAGCTCCAAGGAGAGCACTCGTGTCTATACT
CAAATTTAACACAAGATCGCTCACAACTAGATTCTAATTTCACAAGTGTTCAAATTCAAAATATAGTGAAAGTTGATCCTAGTGTTACTGTGTCTGTGCTTGTGGAAATC
ATAAAACAACAATATGGTTACAATGTTAAGTATGGACGAGTTTGGCAAGCGAAGAAAAAAACTGATCTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MIFDYKENLLLAGKRYCVTQHYEIVVTDSNQHLWNVRCKQWSNGCNWRLRATKRKSHGLFEITKLQGEHSCLYSNLTQDRSQLDSNFTSVQIQNIVKVDPSVTVSVLVEI
IKQQYGYNVKYGRVWQAKKKTDL

CSPI06G15930 (gene) of Cucumber (PI 183967) v1 genome