; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G16360 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G16360
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionVoltage-dependent T-type calcium channel subunit alpha-1I (Ca(V)3.3) like
Genome locationChr6:14765206..14766063
RNA-Seq ExpressionCSPI06G16360
SyntenyCSPI06G16360
Gene Ontology termsGO:0045490 - pectin catabolic process (biological process)
GO:0050896 - response to stimulus (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647058.1 hypothetical protein Csa_023003, partial [Cucumis sativus]8.2e-29100Show/hide
Query:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHGSSILGEDAA
        MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHGSSILGEDAA
Subjt:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHGSSILGEDAA

KAG6570773.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia]4.8e-2191.38Show/hide
Query:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG
        ME ETA+ AILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRER+KRRLR LHG
Subjt:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG

KAG7010620.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-2191.38Show/hide
Query:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG
        ME ETA+ AILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRER+KRRLR LHG
Subjt:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG

ONI00617.1 hypothetical protein PRUPE_6G098100 [Prunus persica]1.9e-0965.31Show/hide
Query:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG
        +LG+LGR CYAVLCLGV++L V +V+YVG  E  DP ERT+RRLR +HG
Subjt:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG

XP_023512260.1 syntaxin-71-like [Cucurbita pepo subsp. pepo]4.8e-2191.38Show/hide
Query:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG
        ME ETA+ AILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRER+KRRLR LHG
Subjt:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG

TrEMBL top hitse value%identityAlignment
A0A0A0KC65 Uncharacterized protein9.1e-34100Show/hide
Query:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHGSSILGEDAARQLPAVVN
        MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHGSSILGEDAARQLPAVVN
Subjt:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHGSSILGEDAARQLPAVVN

A0A251NMS2 Uncharacterized protein9.2e-1065.31Show/hide
Query:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG
        +LG+LGR CYAVLCLGV++L V +V+YVG  E  DP ERT+RRLR +HG
Subjt:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG

A0A5E4FUM3 Uncharacterized protein1.2e-0965.31Show/hide
Query:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG
        +LG+LGR CYAVLCLGV++L V +V+YVG  E  DP ERT+RRLR +HG
Subjt:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG

A0A660KR43 MLO-like protein1.6e-0967.35Show/hide
Query:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG
        +LG+LGR CYAVLCLGVLL++V + H V   EPTDPRER  RRLR L G
Subjt:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHG

A0A7N2KN99 Uncharacterized protein2.8e-1170.59Show/hide
Query:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHGSS
        +LG+L RHCYAVLCLGVLLL+V + HYV   EP+DPRERT RRLR  HG S
Subjt:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHGSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGGAGACTGCGCTGGCCGCCATTCTCGGAAGATTGGGGCGTCATTGCTATGCGGTTTTGTGTTTGGGAGTTCTTCTTCTCACTGTTGCTGTAGTTCACTACGT
TGGCGACGGAGAGCCGACCGATCCACGCGAGCGGACCAAGCGCCGTCTTCGCCCCTTGCACGGCTCATCAATTCTCGGCGAAGATGCCGCCCGTCAGTTGCCTGCGGTGG
TGAATTGA
mRNA sequenceShow/hide mRNA sequence
GGCATTTTTGAAAATCTAAAGAAATTCACAGCAATTGTGAGACCCACCAAACAAATGCCCATAGCACACAGTAATCACAATCCGGAATCCTCATCCCTATCCATTTCTCA
ATCATTACTCCATTTTTCTTCGTTTCCCCCAAAAACCCTAATCCCCCAATCTTCTTCACCCCTTCTTTTCTGCATCTTTCTTATATAATCTCTCTTTTCCACTTCCCAAC
TCTCCTCACCGGAGCAAACCAAAATTCATGGAGGCGGAGACTGCGCTGGCCGCCATTCTCGGAAGATTGGGGCGTCATTGCTATGCGGTTTTGTGTTTGGGAGTTCTTCT
TCTCACTGTTGCTGTAGTTCACTACGTTGGCGACGGAGAGCCGACCGATCCACGCGAGCGGACCAAGCGCCGTCTTCGCCCCTTGCACGGCTCATCAATTCTCGGCGAAG
ATGCCGCCCGTCAGTTGCCTGCGGTGGTGAATTGAAGCGGCGTATAGGCGGAACGTTTATGCAATTAATTACTAATTTTGCGATATTTTTGTAAAAGGCTAATAAATAGT
TTAATTAGTGCTGATTCCTCATCGGGTAACAAAATGTAAATTATTTGCTTCGTTTTGTGTAAATTCCAATGTGAGATTTTTGTGAAATAAATTATTGGTATCATCATCAC
CATTGTGAACTATATAATTAGGCATTGGGTTGATTCGAGTTTGAGTCATCATCAGGTGATGGTTTATCTCGAGTGCGCTCATCTTTAATGCAATTGAAGAGGTTGTAGGA
AGGTTGGTGGAGTATGAATTATCCAAGTTTTATCTAAACAAATTTAGTAGATATGAAGAATGAAAAAAGATGTATCGGAATTATCCTT
Protein sequenceShow/hide protein sequence
MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHGSSILGEDAARQLPAVVN