; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G16370 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G16370
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationChr6:14766870..14767802
RNA-Seq ExpressionCSPI06G16370
SyntenyCSPI06G16370
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149541.1 protein transport protein Sec61 subunit beta [Cucumis sativus]2.5e-47100Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_008463929.1 PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo]5.6e-4799.08Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_022140347.1 protein transport protein Sec61 subunit beta [Momordica charantia]6.9e-3784.4Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGV APRGSAAATAGLRRRR  ST ++ S G+VG GSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARS AGV
Subjt:  YRARSAAGV

XP_022958107.1 protein transport protein Sec61 subunit beta [Cucurbita moschata]1.9e-3988.07Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTS + +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_038902812.1 protein transport protein Sec61 subunit beta [Benincasa hispida]4.9e-4393.58Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

TrEMBL top hitse value%identityAlignment
A0A0A0KHR1 Protein transport protein Sec61 subunit beta1.2e-47100Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A1S3CKE5 Protein transport protein Sec61 subunit beta2.7e-4799.08Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A5D3CTD4 Protein transport protein Sec61 subunit beta2.7e-4799.08Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A6J1H102 Protein transport protein Sec61 subunit beta9.4e-4088.07Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTS + +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A6J1JZ65 Protein transport protein Sec61 subunit beta9.4e-4088.07Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTS + +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

SwissProt top hitse value%identityAlignment
A8I6P9 Protein transport protein Sec61 subunit beta3.5e-0745.74Show/hide
Query:  SQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK
        SQSQ+ST      R    AP G+    AG  RRRP   S  + T      +      + FYTDD PG K+SP VV+ MSL FI FVT LHV GK
Subjt:  SQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK

P38389 Protein transport protein Sec61 subunit beta3.7e-1765.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

P60467 Protein transport protein Sec61 subunit beta1.0e-0642.71Show/hide
Query:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        S T+ GS+ R    A    AA +   +R+    G+ SA  +T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

P60468 Protein transport protein Sec61 subunit beta1.0e-0642.71Show/hide
Query:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        S T+ GS+ R    A    AA +   +R+    G+ SA  +T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

Q9CQS8 Protein transport protein Sec61 subunit beta1.0e-0642.71Show/hide
Query:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        S T+ GS+ R    A    AA +   +R+    G+ SA  +T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein2.6e-1865.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein2.6e-1865.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein2.6e-1865.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.4 Preprotein translocase Sec, Sec61-beta subunit protein2.6e-1865.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT5G60460.1 Preprotein translocase Sec, Sec61-beta subunit protein4.2e-3274.07Show/hide
Query:  MARGASQSQSSTSSG-STARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK
        MARG+SQSQ STS+G STARPG+ APRGSAAATAG+RRRR G     +S G  G G SG  NMLRFYTDDAPGLKISPTVVL+MSLCFIGFVT LHVFGK
Subjt:  MARGASQSQSSTSSG-STARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK

Query:  LYRARSAA
        LY  +S +
Subjt:  LYRARSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGAGGCGCTTCTCAATCCCAATCCTCAACCTCCTCTGGCTCTACTGCTAGACCTGGCGTTGTCGCTCCTCGCGGCTCTGCGGCGGCCACTGCTGGCCTCCGTCG
CCGCCGTCCTGGCTCTACTTCTGCCTCCGCCTCTACTGGACTCGTAGGCGGCGGATCAAGCGGCGGCGGTAACATGCTGAGATTCTACACCGACGATGCTCCAGGCTTAA
AGATTTCTCCCACCGTCGTCCTCGTTATGAGCCTCTGCTTCATCGGCTTCGTCACTGGCCTCCACGTCTTTGGTAAGCTCTACCGTGCACGATCCGCCGCTGGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
TAGAAATTTGATAATTAAATTAATAGTTATGTTTCATTGGATATTATTATTATTATTATTATCTTGGTGAAATATTCAGGATTGTTGAAAGTTGAATGTTCAATAGTCTT
TGAGGCTTCTGGCTTTCTTTTTGTTTTCTTTTTTTAATTTCCCACCGATCAGATTTTTCTCCCAAATTCACATATTTCCGATCATCTTCTCCGATTCTCAATTCCATGGC
CAGAGGCGCTTCTCAATCCCAATCCTCAACCTCCTCTGGCTCTACTGCTAGACCTGGCGTTGTCGCTCCTCGCGGCTCTGCGGCGGCCACTGCTGGCCTCCGTCGCCGCC
GTCCTGGCTCTACTTCTGCCTCCGCCTCTACTGGACTCGTAGGCGGCGGATCAAGCGGCGGCGGTAACATGCTGAGATTCTACACCGACGATGCTCCAGGCTTAAAGATT
TCTCCCACCGTCGTCCTCGTTATGAGCCTCTGCTTCATCGGCTTCGTCACTGGCCTCCACGTCTTTGGTAAGCTCTACCGTGCACGATCCGCCGCTGGTGTTTAATTCTA
TGCTGAGTTCGTTTACCGTGCCTTTTCCCTTCCCGATCTTTTCGTTTCCTAGATTAAATGTTCAAGTTTCTCTGTAAATTTCACAATCGTTTTACTTTCTTGAGTTTTCA
ATTCCATCACGGTTGTGGACGTATCAAAAGGAACGAGGTCGTTCTCTTTAGCTGATAATTTCTCTTTGGATCAATCTAGTTCTTGTGAATGATGCGGATTGCAGAGTTTT
TTCCTTTTTGTCTGTGTATTGAGTTAATCTCACTCAAAATTGTGCTTTTATATGGTATGAAGATTAGCTATTTCTTCTCGATTTTGTTTTGGATGATTTAGCGGGGATTC
TATATATGGTTTCTTCTTTATTAGCAAATAAACTTTGCACGTTTTCTGATGGA
Protein sequenceShow/hide protein sequence
MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV