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CSPI06G16840 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G16840
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGlutamate receptor
Genome locationChr6:15221736..15221993
RNA-Seq ExpressionCSPI06G16840
SyntenyCSPI06G16840
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0015276 - ligand-gated ion channel activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064863.1 glutamate receptor 2.1-like isoform X1 [Cucumis melo var. makuwa]8.7e-1167.92Show/hide
Query:  AAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT
        AAV +K GVVLDLN +VGKM LS I+M L+DFYA+++YYKT++ILNP+DSNG+
Subjt:  AAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT

KAE8653072.1 hypothetical protein Csa_019840, partial [Cucumis sativus]8.1e-2586.08Show/hide
Query:  MLKIGALF--ILVVSGGAAEADKTVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGTN
        MLKIGALF  ILV+S  AAEADKT AAVNLK GVVLDLNDVVGKMG S INMTLSDFYAN++YYKTKLILNPMDSNGTN
Subjt:  MLKIGALF--ILVVSGGAAEADKTVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGTN

XP_008445300.1 PREDICTED: glutamate receptor 2.1-like isoform X1 [Cucumis melo]3.0e-1146.07Show/hide
Query:  GMGFEMLKIGALFILVVSGGAAEADK--------TVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT
        G GF ++ +  +F+ ++    A+  +          AAV +K GVVLDLN +VGKM LS I+M L+DFYA+++YYKT++ILNP+DSNG+
Subjt:  GMGFEMLKIGALFILVVSGGAAEADK--------TVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT

XP_008445301.1 PREDICTED: glutamate receptor 2.8-like isoform X2 [Cucumis melo]3.0e-1146.07Show/hide
Query:  GMGFEMLKIGALFILVVSGGAAEADK--------TVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT
        G GF ++ +  +F+ ++    A+  +          AAV +K GVVLDLN +VGKM LS I+M L+DFYA+++YYKT++ILNP+DSNG+
Subjt:  GMGFEMLKIGALFILVVSGGAAEADK--------TVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT

XP_023537857.1 glutamate receptor 2.1-like [Cucurbita pepo subsp. pepo]5.6e-1057.35Show/hide
Query:  ILVVSGGAAEADKTVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT
        +L  +  AAE +KTVAAV +K GVVL+ N   GKMG++ I+M LSDFYA++++YKTK+IL  +DSNGT
Subjt:  ILVVSGGAAEADKTVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT

TrEMBL top hitse value%identityAlignment
A0A0A0KCD3 Uncharacterized protein4.9e-2886.21Show/hide
Query:  MREGMGFEMLKIGALF--ILVVSGGAAEADKTVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGTN
        MREGMGFEMLKIGALF  ILV+S  AAEADKT AAVNLK GVVLDLN VVGKMGLS  NMTLSDFYAN++YYKTKLILNPMDSNGTN
Subjt:  MREGMGFEMLKIGALF--ILVVSGGAAEADKTVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGTN

A0A0A0LSQ2 ANF_receptor domain-containing protein6.1e-1045.05Show/hide
Query:  GMGFEMLKIGALFI---LVVSGGAAEADK-------TVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT
        G GF ++ +  + I   +++  GA   ++         AAV +K GVVLDLN +VGK+ LS I+M L+DFYA ++YYKT++ILNP+DSNG+
Subjt:  GMGFEMLKIGALFI---LVVSGGAAEADK-------TVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT

A0A1S3BBW2 Glutamate receptor1.4e-1146.07Show/hide
Query:  GMGFEMLKIGALFILVVSGGAAEADK--------TVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT
        G GF ++ +  +F+ ++    A+  +          AAV +K GVVLDLN +VGKM LS I+M L+DFYA+++YYKT++ILNP+DSNG+
Subjt:  GMGFEMLKIGALFILVVSGGAAEADK--------TVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT

A0A1S3BCC2 Glutamate receptor1.4e-1146.07Show/hide
Query:  GMGFEMLKIGALFILVVSGGAAEADK--------TVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT
        G GF ++ +  +F+ ++    A+  +          AAV +K GVVLDLN +VGKM LS I+M L+DFYA+++YYKT++ILNP+DSNG+
Subjt:  GMGFEMLKIGALFILVVSGGAAEADK--------TVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT

A0A5A7V9M7 Glutamate receptor4.2e-1167.92Show/hide
Query:  AAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT
        AAV +K GVVLDLN +VGKM LS I+M L+DFYA+++YYKT++ILNP+DSNG+
Subjt:  AAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT

SwissProt top hitse value%identityAlignment
Q9C5V5 Glutamate receptor 2.82.8e-0450Show/hide
Query:  LKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDS
        +K GVVLDLN    K+ L+ IN+ LSDFY +   Y+T+L L+  DS
Subjt:  LKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDS

Q9LFN5 Glutamate receptor 2.51.3e-0438.57Show/hide
Query:  LFILVVSGGAAEADKTVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT
        L  LV+S G ++ +    A+ +K G+VL  N  +  + L  INM+LS+FY   N +KT+++LN  DS  T
Subjt:  LFILVVSGGAAEADKTVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT

Q9LFN8 Glutamate receptor 2.62.8e-0445.65Show/hide
Query:  GVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT
        G+VLD N  +  + L  INM+LS+FY   N +KT+++LN  DS  T
Subjt:  GVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT

Q9LV72 Glutamate receptor 1.22.5e-0550Show/hide
Query:  VNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNG
        + ++ G+VLDL  V GK+  S ++M LSDFY N N YKT+L L   DS+G
Subjt:  VNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNG

Arabidopsis top hitse value%identityAlignment
AT2G29100.1 glutamate receptor 2.97.6e-0550Show/hide
Query:  LKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDS
        +K GVVLDLN    K+ L+ I M +SDFYA+   Y T+L L+  DS
Subjt:  LKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDS

AT2G29110.1 glutamate receptor 2.82.0e-0550Show/hide
Query:  LKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDS
        +K GVVLDLN    K+ L+ IN+ LSDFY +   Y+T+L L+  DS
Subjt:  LKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDS

AT5G11180.1 glutamate receptor 2.62.0e-0545.65Show/hide
Query:  GVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT
        G+VLD N  +  + L  INM+LS+FY   N +KT+++LN  DS  T
Subjt:  GVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGT

AT5G48400.1 Glutamate receptor family protein1.8e-0650Show/hide
Query:  VNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNG
        + ++ G+VLDL  V GK+  S ++M LSDFY N N YKT+L L   DS+G
Subjt:  VNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNG

AT5G48400.2 Glutamate receptor family protein1.8e-0650Show/hide
Query:  VNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNG
        + ++ G+VLDL  V GK+  S ++M LSDFY N N YKT+L L   DS+G
Subjt:  VNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGAAGGCATGGGTTTTGAAATGTTGAAGATCGGTGCACTCTTCATATTAGTAGTGTCGGGAGGGGCAGCAGAGGCGGACAAGACGGTTGCGGCGGTAAACTTGAA
GGGGGGGGTGGTTTTGGATTTGAATGATGTTGTTGGGAAGATGGGTTTGAGTTGGATTAATATGACGCTCTCTGATTTTTATGCCAATCAAAATTATTATAAGACCAAAT
TGATTCTCAATCCCATGGACTCCAATGGAACGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGAAGGCATGGGTTTTGAAATGTTGAAGATCGGTGCACTCTTCATATTAGTAGTGTCGGGAGGGGCAGCAGAGGCGGACAAGACGGTTGCGGCGGTAAACTTGAA
GGGGGGGGTGGTTTTGGATTTGAATGATGTTGTTGGGAAGATGGGTTTGAGTTGGATTAATATGACGCTCTCTGATTTTTATGCCAATCAAAATTATTATAAGACCAAAT
TGATTCTCAATCCCATGGACTCCAATGGAACGAACTAA
Protein sequenceShow/hide protein sequence
MREGMGFEMLKIGALFILVVSGGAAEADKTVAAVNLKGGVVLDLNDVVGKMGLSWINMTLSDFYANQNYYKTKLILNPMDSNGTN