; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G17080 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G17080
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description60S ribosomal protein L29
Genome locationChr6:15396419..15396696
RNA-Seq ExpressionCSPI06G17080
SyntenyCSPI06G17080
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN47471.2 hypothetical protein Csa_023012 [Cucumis sativus]2.9e-24100Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

XP_008458370.1 PREDICTED: 60S ribosomal protein L29-1 [Cucumis melo]1.4e-2398.36Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

XP_008458371.1 PREDICTED: 60S ribosomal protein L29-1-like [Cucumis melo]5.5e-2396.72Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHN KSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

XP_010534701.1 PREDICTED: 60S ribosomal protein L29-1 [Tarenaya hassleriana]4.2e-2395.08Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQSHKAHKNGIKKPR+HRHTSTKGMDPKFLRNQRYA+KHN+KSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

XP_011657268.1 60S ribosomal protein L29-1 [Cucumis sativus]2.9e-24100Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

TrEMBL top hitse value%identityAlignment
A0A0A0KCX6 60S ribosomal protein L291.4e-24100Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

A0A1S3C7P2 60S ribosomal protein L292.6e-2396.72Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHN KSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

A0A1S3C7U0 60S ribosomal protein L297.0e-2498.36Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

A0A6D2HT42 60S ribosomal protein L291.9e-2191.8Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHTSTKGMDPKFLRNQRYA+KHN KSGENAS EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

V9HZW1 60S ribosomal protein L291.5e-2191.8Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYA+KHN KSGE  SGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

SwissProt top hitse value%identityAlignment
P47914 60S ribosomal protein L296.3e-1475Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK
        MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK

Q58DW3 60S ribosomal protein L296.3e-1475Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK
        MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK

Q84WM0 60S ribosomal protein L29-22.8e-2286.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

Q8HXB8 60S ribosomal protein L296.3e-1475Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK
        MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK

Q9M7X7 60S ribosomal protein L29-19.7e-2386.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family2.0e-2386.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

AT3G06680.2 Ribosomal L29e protein family2.0e-2386.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

AT3G06700.1 Ribosomal L29e protein family6.9e-2486.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

AT3G06700.2 Ribosomal L29e protein family6.9e-2486.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

AT3G06700.3 Ribosomal L29e protein family6.9e-2486.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCCCACAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGACCC
GAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATACCAAGAGTGGGGAAAATGCTTCTGGGGAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCCCACAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGACCC
GAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATACCAAGAGTGGGGAAAATGCTTCTGGGGAAGAGTAA
Protein sequenceShow/hide protein sequence
MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE