; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G17200 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G17200
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionzinc finger protein 6-like
Genome locationChr6:15499097..15499818
RNA-Seq ExpressionCSPI06G17200
SyntenyCSPI06G17200
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN47401.1 hypothetical protein Csa_022997 [Cucumis sativus]1.2e-73100Show/hide
Query:  MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKY
        MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKY
Subjt:  MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKY

Query:  GIQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIFC
        GIQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIFC
Subjt:  GIQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIFC

XP_004150094.1 zinc finger protein 6 [Cucumis sativus]4.4e-73100Show/hide
Query:  MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYG
        MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYG
Subjt:  MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYG

Query:  IQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIFC
        IQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIFC
Subjt:  IQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIFC

XP_008458383.1 PREDICTED: zinc finger protein 6-like [Cucumis melo]9.3e-6389.71Show/hide
Query:  MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKY
        MMKLFGFSVTASTT+T+GA  LGAPCPNH+KRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPL PTKHSRNF  STPP ST+GIWSAGRAPPPK 
Subjt:  MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKY

Query:  GIQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRI
        GIQVQARPAVVGGG+V+RESNGVDLHLSLAPSS RI
Subjt:  GIQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRI

XP_023006285.1 zinc finger protein 6-like [Cucurbita maxima]4.2e-3968.38Show/hide
Query:  MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYG
        MKLFG+SVTAS        +LGAPC NH KRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLP       RNF   TPP S  GI     +PPP Y 
Subjt:  MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYG

Query:  IQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIF
        + V+A P+ VGGGE+N E+NGVDLHLSLAPSS RIF
Subjt:  IQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIF

XP_023548316.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]2.5e-3968.38Show/hide
Query:  MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYG
        MKLFG+SVTAS        +LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLP       RNF   TPP S     +AGR+PPP Y 
Subjt:  MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYG

Query:  IQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIF
        + V+A P+ VGGGE+N E+NGVDLHLSLAPSS RIF
Subjt:  IQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIF

TrEMBL top hitse value%identityAlignment
A0A0A0KI02 C2H2-type domain-containing protein5.7e-74100Show/hide
Query:  MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKY
        MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKY
Subjt:  MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKY

Query:  GIQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIFC
        GIQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIFC
Subjt:  GIQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIFC

A0A1S3C7Q6 zinc finger protein 6-like4.5e-6389.71Show/hide
Query:  MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKY
        MMKLFGFSVTASTT+T+GA  LGAPCPNH+KRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPL PTKHSRNF  STPP ST+GIWSAGRAPPPK 
Subjt:  MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKY

Query:  GIQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRI
        GIQVQARPAVVGGG+V+RESNGVDLHLSLAPSS RI
Subjt:  GIQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRI

A0A5D3BTX6 Zinc finger protein 6-like4.5e-6389.71Show/hide
Query:  MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKY
        MMKLFGFSVTASTT+T+GA  LGAPCPNH+KRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPL PTKHSRNF  STPP ST+GIWSAGRAPPPK 
Subjt:  MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKY

Query:  GIQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRI
        GIQVQARPAVVGGG+V+RESNGVDLHLSLAPSS RI
Subjt:  GIQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRI

A0A6J1H7Y0 zinc finger protein 6-like4.5e-3967.65Show/hide
Query:  MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYG
        MKLFG+SV AS        +LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLP       RNF   TPP S     +AGR+PPP Y 
Subjt:  MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYG

Query:  IQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIF
        + V+A P+ VGGGE+N E+NGVDLHLSLAPSS RIF
Subjt:  IQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIF

A0A6J1KZQ7 zinc finger protein 6-like2.0e-3968.38Show/hide
Query:  MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYG
        MKLFG+SVTAS        +LGAPC NH KRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLP       RNF   TPP S  GI     +PPP Y 
Subjt:  MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYG

Query:  IQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIF
        + V+A P+ VGGGE+N E+NGVDLHLSLAPSS RIF
Subjt:  IQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIF

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 81.0e-0872.97Show/hide
Query:  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ
        N+N+RFEC +C R F  SQALGGHQNAHKRERQ AK+
Subjt:  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ

Q39264 Zinc finger protein 52.5e-1048.1Show/hide
Query:  MKLFGFSVTAS------TTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHS
        +KLFGF + +       TT+   +++         KR ECQ+CG+EFANSQALGGHQNAHK+ER L K+ L LQ  + S
Subjt:  MKLFGFSVTAS------TTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHS

Q39265 Zinc finger protein 61.3e-1145.35Show/hide
Query:  MKLFGFSV--TASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAK--QLLPLQPTKHSRNFLASTPP
        +KLFG ++  T S  +       G+   + ++++ECQ+C REFANSQALGGHQNAHK+ERQL K  Q+L  +      NF   T P
Subjt:  MKLFGFSV--TASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAK--QLLPLQPTKHSRNFLASTPP

Q84WI0 Zinc finger protein GIS9.5e-1075.68Show/hide
Query:  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ
        +HN+RFEC +C R F  SQALGGHQNAHKRERQLAK+
Subjt:  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ

Q9C9H1 Zinc finger protein GIS31.6e-0934.29Show/hide
Query:  MKLFGFSVTASTTSTDGA--TNLGAPCPNH-------------------------NKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKH-
        +KLFGFSV      +D +  TNL +  P                            +++ECQ+C REF NSQALGGHQNAHK+ERQ  K+   LQ T++ 
Subjt:  MKLFGFSVTASTTSTDGA--TNLGAPCPNH-------------------------NKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKH-

Query:  SRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGG
        + NF  +   S  +         PP + +   A P  +GG
Subjt:  SRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGG

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 51.8e-1148.1Show/hide
Query:  MKLFGFSVTAS------TTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHS
        +KLFGF + +       TT+   +++         KR ECQ+CG+EFANSQALGGHQNAHK+ER L K+ L LQ  + S
Subjt:  MKLFGFSVTAS------TTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHS

AT1G67030.1 zinc finger protein 69.4e-1345.35Show/hide
Query:  MKLFGFSV--TASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAK--QLLPLQPTKHSRNFLASTPP
        +KLFG ++  T S  +       G+   + ++++ECQ+C REFANSQALGGHQNAHK+ERQL K  Q+L  +      NF   T P
Subjt:  MKLFGFSV--TASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAK--QLLPLQPTKHSRNFLASTPP

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein1.1e-1034.29Show/hide
Query:  MKLFGFSVTASTTSTDGA--TNLGAPCPNH-------------------------NKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKH-
        +KLFGFSV      +D +  TNL +  P                            +++ECQ+C REF NSQALGGHQNAHK+ERQ  K+   LQ T++ 
Subjt:  MKLFGFSVTASTTSTDGA--TNLGAPCPNH-------------------------NKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKH-

Query:  SRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGG
        + NF  +   S  +         PP + +   A P  +GG
Subjt:  SRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGG

AT2G41940.1 zinc finger protein 87.4e-1072.97Show/hide
Query:  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ
        N+N+RFEC +C R F  SQALGGHQNAHKRERQ AK+
Subjt:  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein6.7e-1175.68Show/hide
Query:  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ
        +HN+RFEC +C R F  SQALGGHQNAHKRERQLAK+
Subjt:  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGCTGTTTGGTTTTTCAGTGACGGCTAGTACTACGTCTACTGATGGAGCCACCAACTTGGGTGCGCCATGTCCGAACCACAACAAGAGATTTGAGTGCCAATT
CTGCGGCCGTGAGTTCGCCAACTCTCAAGCCCTTGGTGGCCACCAGAACGCACACAAGCGCGAGCGCCAGCTCGCCAAGCAATTACTCCCTCTCCAACCCACTAAACACT
CTCGTAACTTTTTAGCTTCCACGCCGCCTTCGTCTACTGTCGGAATCTGGTCGGCGGGTAGAGCTCCACCACCGAAATATGGGATCCAGGTACAAGCGAGGCCGGCGGTG
GTTGGCGGCGGGGAAGTTAACAGGGAAAGTAATGGCGTTGATCTCCACCTCAGTCTCGCACCTTCATCGGGCAGGATTTTCTGTTAA
mRNA sequenceShow/hide mRNA sequence
GAAAGAAAGAAAATTCCAATAACATAAGTTTGTCTATAAATACATGGTCCACAAAGCGAAAAGGAATATATTGATTCAAATTTTTGCGTAAGTGTGCATAAATTAGAAGT
GGATATTATATGATGAAGCTGTTTGGTTTTTCAGTGACGGCTAGTACTACGTCTACTGATGGAGCCACCAACTTGGGTGCGCCATGTCCGAACCACAACAAGAGATTTGA
GTGCCAATTCTGCGGCCGTGAGTTCGCCAACTCTCAAGCCCTTGGTGGCCACCAGAACGCACACAAGCGCGAGCGCCAGCTCGCCAAGCAATTACTCCCTCTCCAACCCA
CTAAACACTCTCGTAACTTTTTAGCTTCCACGCCGCCTTCGTCTACTGTCGGAATCTGGTCGGCGGGTAGAGCTCCACCACCGAAATATGGGATCCAGGTACAAGCGAGG
CCGGCGGTGGTTGGCGGCGGGGAAGTTAACAGGGAAAGTAATGGCGTTGATCTCCACCTCAGTCTCGCACCTTCATCGGGCAGGATTTTCTGTTAAGTGAAGTATTGTTT
TTTCTTTTCTTTTTTTTTTAACAATTTCCTTCCAAAGCAGAATTGTGTAAAACTGTTGAATGGAAAATTGGGAGGAAAGTGTTTGGAATTTGATCGATTATTATGAACGG
AAATTGTGATACATGGAATAATACTACCAATTTTCTCACCAGTCAGCTTACCAATCAATTCC
Protein sequenceShow/hide protein sequence
MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAV
VGGGEVNRESNGVDLHLSLAPSSGRIFC