; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G17370 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G17370
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionglycine-rich protein
Genome locationChr6:15635796..15636824
RNA-Seq ExpressionCSPI06G17370
SyntenyCSPI06G17370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647089.1 hypothetical protein Csa_023033 [Cucumis sativus]5.0e-94100Show/hide
Query:  MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGD
        MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGD
Subjt:  MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGD

Query:  FDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLIS
        FDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLIS
Subjt:  FDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLIS
XP_008458406.1 PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo]7.0e-9695.5Show/hide
Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCIS TDSITDQIP SSTAA+LRLSAALFPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
        GREDDGFGGGDFDGP GGDGGG GGGRGWNFDRFGGNDWDESS SSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEA GNSERGKL+MRLISVC
Subjt:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
XP_011657286.1 uncharacterized protein LOC105435841 [Cucumis sativus]3.3e-101100Show/hide
Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
        GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
Subjt:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
XP_022138602.1 uncharacterized protein LOC111009719 [Momordica charantia]2.1e-8788Show/hide
Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSM ANN +GFAK LNRLDFVSNYC+S +DSIT+QIPPSS A AL+LSAALFPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
        G EDDGFGG +FDG  GG GGGS  GRGWNFDRFGGNDWDESSSSSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA+AIGNSERGKL+MRLISVC
Subjt:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
XP_038874866.1 uncharacterized protein LOC120067363 [Benincasa hispida]3.1e-9191Show/hide
Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDS+TDQI PSS A AL+LSAALFP+ATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYS DSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
        GREDDGF GGDFDGP GGD G SGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA EA+GNSERGK++MRLISVC
Subjt:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
TrEMBL top hitse value%identityAlignment
A0A0A0KG90 Uncharacterized protein1.6e-101100Show/hide
Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
        GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
Subjt:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
A0A1S3C7S8 uncharacterized protein LOC1034978283.4e-9695.5Show/hide
Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCIS TDSITDQIP SSTAA+LRLSAALFPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
        GREDDGFGGGDFDGP GGDGGG GGGRGWNFDRFGGNDWDESS SSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEA GNSERGKL+MRLISVC
Subjt:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
A0A6J1CBL0 uncharacterized protein LOC1110097199.9e-8888Show/hide
Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSM ANN +GFAK LNRLDFVSNYC+S +DSIT+QIPPSS A AL+LSAALFPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
        G EDDGFGG +FDG  GG GGGS  GRGWNFDRFGGNDWDESSSSSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA+AIGNSERGKL+MRLISVC
Subjt:  GREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC
A0A6J1H560 uncharacterized protein LOC1114602361.3e-8285.57Show/hide
Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYS-DDS
        MD+SLVAGTLSMVANN +GFAK LNRLD +SNY  S TDSITDQIPPSS A AL+LSAALFPVATIAPPPVKS+S RS+SR FLRRKRRTKRRLYS DDS
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYS-DDS

Query:  EGREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISV
        EG ED+GF GGDFDGP GGDGGG GGGRGWNFDRF G+DWDESSSSS+S NPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSER KL +RLISV
Subjt:  EGREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISV

Query:  C
        C
Subjt:  C
A0A6J1KZI4 uncharacterized protein LOC1114990051.1e-8386.57Show/hide
Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDS
        MD+SLVAGTLS+VANN +GFAK LNRLD +SNY IS TDSITDQIPPSS A AL+LS ALFPVATIAPPPVKS+S RS+SRTFLRRKRRTKRRLY SDDS
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDS

Query:  EGREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISV
        EG ED+GF  GDFDGP GGDGGG GGGRGWNFDRFGGNDWDESSSSS+S NPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSER KL MRLISV
Subjt:  EGREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISV

Query:  C
        C
Subjt:  C
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G06780.1 glycine-rich protein5.5e-3046.26Show/hide
Query:  MDSSLVAGTLSM-VANNSIGFAK-LLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDD
        M+ SL+A T+++  A   I F K LL RLD  ++  IS  DS+ D   P      ++ SA +FPV  IAPPPV+S SY++  R  +R+KRRT+R  +  D
Subjt:  MDSSLVAGTLSM-VANNSIGFAK-LLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDD

Query:  SEGREDDG-------FGGGDFDGPIG-GDGGGSGGGRGWNF----DRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGN
         +   D G       FGG   DGP G G GG  GGG+GWN+      FG ++WD  SS SS S+PA  FVYEV+CWIALSNCVHFAFK++VR     + +
Subjt:  SEGREDDG-------FGGGDFDGPIG-GDGGGSGGGRGWNF----DRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGN

Query:  SERGKLAMRLISVC
         ER KL + L  VC
Subjt:  SERGKLAMRLISVC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCTCTCTGGTTGCCGGAACCCTTTCAATGGTTGCCAACAATAGCATCGGCTTCGCAAAACTCCTCAATCGCCTTGATTTCGTCTCCAATTACTGTATCTCCGT
CACCGATTCAATCACTGACCAGATCCCACCGTCTTCCACCGCCGCAGCTCTTCGATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCGCCCCCTGTTAAATCGG
TTTCCTACCGATCGGCATCTCGGACATTTCTCCGTAGAAAGCGTCGAACGAAACGTAGATTGTATAGCGATGATTCAGAGGGACGCGAGGACGATGGATTTGGTGGCGGC
GATTTTGATGGACCGATTGGTGGAGATGGCGGCGGCAGCGGCGGTGGTAGAGGTTGGAATTTCGATAGATTTGGAGGAAATGATTGGGATGAATCATCGTCTTCTTCTTC
CTCTTCAAATCCAGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATTGCGTTATCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAA
TTGGGAATTCCGAAAGAGGGAAATTGGCCATGAGATTGATCTCCGTTTGTTGA
mRNA sequenceShow/hide mRNA sequence
GCCCACTACGTTGAGACGGCGGACTATTGCCGTGAGCGAATTGGTCTAAGCCTCGCATTATGAACACGCGGGGTTTTCGGATTCCAGACTCGTGGAGTGACTCGCCCGCC
AACTCGTTTTCCTCATTGATTTTTCTTCGATTCCCCCAAATTTCTTAAATCCCTAGTTCTCTCCTACTACGAAATCCCAATTCCAAATCCTTCCATTCCAATGGATTCCT
CTCTGGTTGCCGGAACCCTTTCAATGGTTGCCAACAATAGCATCGGCTTCGCAAAACTCCTCAATCGCCTTGATTTCGTCTCCAATTACTGTATCTCCGTCACCGATTCA
ATCACTGACCAGATCCCACCGTCTTCCACCGCCGCAGCTCTTCGATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCGCCCCCTGTTAAATCGGTTTCCTACCG
ATCGGCATCTCGGACATTTCTCCGTAGAAAGCGTCGAACGAAACGTAGATTGTATAGCGATGATTCAGAGGGACGCGAGGACGATGGATTTGGTGGCGGCGATTTTGATG
GACCGATTGGTGGAGATGGCGGCGGCAGCGGCGGTGGTAGAGGTTGGAATTTCGATAGATTTGGAGGAAATGATTGGGATGAATCATCGTCTTCTTCTTCCTCTTCAAAT
CCAGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATTGCGTTATCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTC
CGAAAGAGGGAAATTGGCCATGAGATTGATCTCCGTTTGTTGATTAGTACAAATTCTCTTTCTCAATGATCATCTTTTAGAATGGAAATCTGGGTATAAATCTCTTGAAT
TCAATTTGAAAATTGGTATGTATATATTTTGTAAATAATTAACATTGTTTTATAAATTGGTTGGGAATTACATATTGAAATCTGTGCCTTATCAATCTGATAATAACATT
CCTTAGTAGTTAACTCTCTGTGGCTGGTGTTCATGTTTA
Protein sequenceShow/hide protein sequence
MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGG
DFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISVC