| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN66323.1 hypothetical protein VITISV_007384 [Vitis vinifera] | 1.5e-195 | 48.65 | Show/hide |
Query: IKDYSEDFDFGPWFFTPHKPDNKTDKEWELCHRKVCGFMRLW----------------------------------------MMKLKYQDGAPMLDHLNT
+KDY + P F +P+NK D EW L HR+VCG++R W MM LKYQDG PM DHLNT
Subjt: IKDYSEDFDFGPWFFTPHKPDNKTDKEWELCHRKVCGFMRLW----------------------------------------MMKLKYQDGAPMLDHLNT
Query: FQGILNQLSRMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGML------------WLLKRGGGVKVRVQEVITEAKA------------------
FQGI+NQL MNIKFE+E+ GLW+LGTLP+ W+ FRTSLSNSA +G++ + ++ G + ++TE K
Subjt: FQGILNQLSRMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGML------------WLLKRGGGVKVRVQEVITEAKA------------------
Query: ---------------------------------------GVTSLQMLSVTIAMKKAYKE--VLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVR
G Q+ + T Y V ++ WVIDSGAS+ AT +++FF SYT GDFGSVR
Subjt: ---------------------------------------GVTSLQMLSVTIAMKKAYKE--VLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVR
Query: MGNDGSTNTVGIEDVSLMMKVSAIPSTMTYGST-KGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKST
MGNDGS +G+ D SLMMK SA PS + GS+ +GSMVI +G K SSLY M A++++S IN V+D++ ELWH RL H+SEKGL IL K N L +K
Subjt: MGNDGSTNTVGIEDVSLMMKVSAIPSTMTYGST-KGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKST
Query: PLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDS
LKRC HCLAGK TRV FK+ +H RKP + LV+SDVCGPMKTK+LGG+LYFVTF DDHSRKIWVYTLKTKDQVL FKQFHA VER++GEKLKC+RTD+
Subjt: PLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDS
Query: GCEYCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFG
G EY GPFDEYCR HDIRHQK PPKTPQLNG+AER+N+TLVERVRCLLS+SQLP+SFW EALNTVV+V NLTPCVPL +V + IWS +ISY HLRVFG
Subjt: GCEYCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFG
Query: CKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDV---------------------------------------IEDEVQNEQF-
CKAFVH+PKDERSKLD KT+ CVF+GYGQDE GYR YDP +KKL+RSRDV +EDE ++Q
Subjt: CKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDV---------------------------------------IEDEVQNEQF-
Query: -----------SDTYESFEHVG---------TEDSVQEQLAETVVPTDVSLRRSIRDRRPSTRYSPNESLLLTDG
+T++ +G +D V EQ P+D+ LRR RDR PSTRYS ++ +LLTDG
Subjt: -----------SDTYESFEHVG---------TEDSVQEQLAETVVPTDVSLRRSIRDRRPSTRYSPNESLLLTDG
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| KAA0040427.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-199 | 66.21 | Show/hide |
Query: KVCGFMRLWMMKLKYQDGAPMLDHL---NTFQGILNQLS-----RMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGMLWLLKRGGGVKVRVQEVI
KVCGFMRLW+ +D L+H+ Q + N+L + IKFEDEI GLWVLGTLPDSW+IFRTSLSNSA NG+L + VK V
Subjt: KVCGFMRLWMMKLKYQDGAPMLDHL---NTFQGILNQLS-----RMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGMLWLLKRGGGVKVRVQEVI
Query: TEAKAGVTSLQMLSVTIAMKKAYK----EVLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIEDVSL---------MMKVSA
K+ +S+Q + + K V I++ WVIDSGASV ATSKREFFASYTPGDFGSVRMGNDG TN VGI DV L + V
Subjt: TEAKAGVTSLQMLSVTIAMKKAYK----EVLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIEDVSL---------MMKVSA
Query: IP------------------STMTYG---STKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKSTPLK
IP +T G TKGSMVI GQKFSSLYYMDAKI++ DINTVNDEANVELWHKRLSH+SEKGLKILTKKNHL DLKSTPLK
Subjt: IP------------------STMTYG---STKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKSTPLK
Query: RCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCE
RC HCLAGK TRVTFKSSQH RK N+L+LVHS+VCG MKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQV FKQFHA VER+TGEKLKC+RTD+G E
Subjt: RCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCE
Query: YCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKA
YCGPFDEYCRNH IRHQK PPK+ QLNGIA+RLN+TLVERVRCLL++SQLPQSFWGEALNTV++V NLTPCVPLGSEVPN IWSGKDISYSHLRVFGCKA
Subjt: YCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKA
Query: FVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDVIEDEVQN----EQFSDTYESFEHVGTEDSVQEQ
FVHVPKDERSKLDAKTK CVFLGYGQDEFGYR+Y KKKLIRSRDV+ E Q E+ + + E++++++
Subjt: FVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDVIEDEVQN----EQFSDTYESFEHVGTEDSVQEQ
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| KAA0047570.1 putative retrotransposon [Cucumis melo var. makuwa] | 1.6e-200 | 60.53 | Show/hide |
Query: MNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGML------------WLLKRGGGVKVRVQEVITEAKAGVTSLQMLSVTIAMKKA-----------
MNIKFE+EIHGLWVLG L DSW+IFRTSLSNSA NG+L + ++ V+ ++TE + S + + K+
Subjt: MNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGML------------WLLKRGGGVKVRVQEVITEAKAGVTSLQMLSVTIAMKKA-----------
Query: --------YKEVLSKIEKRH----------------------------------------WVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTV
Y L + K H WVIDSGASV ATSK +FFASYTP DFGSVRMGNDGS N V
Subjt: --------YKEVLSKIEKRH----------------------------------------WVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTV
Query: GIEDVSL-----------MMKVSAIPSTM------------------TYGSTKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISE
GI DV L + +S I + + TKGS+VI +G KFSSLYYMDAKI++SDINTVNDE N+ELWHKRLSH+SE
Subjt: GIEDVSL-----------MMKVSAIPSTM------------------TYGSTKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISE
Query: KGLKILTKK-----------NHLPDLKSTPLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTK
KGLKILTKK NHLPDLKSTPLKRC HCLAGK TRVTFKSSQH RKPN+L+LVHS+VCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTK
Subjt: KGLKILTKK-----------NHLPDLKSTPLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTK
Query: DQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEYCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNL
DQVLQ FKQFHA VER+TGEKLKC+RTD+G EYCGPFDEYCRNH IRHQK PPKTPQLNGIAERLN+TLVERVRCLLS+SQLPQSFWGEALNTVV+V NL
Subjt: DQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEYCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNL
Query: TPCVPLGSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDV---------------------
TPCVPLGSEVPN IWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTK CVFLGYGQDEFGYRLYDP KKKLIRSRDV
Subjt: TPCVPLGSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDV---------------------
Query: ------------------IEDEVQNEQFSDTYESFEHVGTEDSVQE
IEDE+QNEQF DT ES E VG EDSVQE
Subjt: ------------------IEDEVQNEQFSDTYESFEHVGTEDSVQE
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| RVW85908.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 7.1e-193 | 47.97 | Show/hide |
Query: FTPHKPDNKTDKEWELCHRKVCGFMRLW----------------------------------------MMKLKYQDGAPMLDHLNTFQGILNQLSRMNIK
F +P+NKTD EW L HR+VCGF+R W MM LKYQDG P+ DHLNTFQGI+NQL+ MNIK
Subjt: FTPHKPDNKTDKEWELCHRKVCGFMRLW----------------------------------------MMKLKYQDGAPMLDHLNTFQGILNQLSRMNIK
Query: FEDEIHGLWVLGTLPDSWKIFRTSLSNSASNG----------------------------MLWLLKRG-------------------------------G
FE+E+ GLW+LGTLPDSW+ FRTSLSNSA +G +L + KRG G
Subjt: FEDEIHGLWVLGTLPDSWKIFRTSLSNSASNG----------------------------MLWLLKRG-------------------------------G
Query: GVKVRVQEVITEAKAGVTSL----------QMLSVTIAMKKAYKE--VLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIED
+K +++ + K G Q+ + T Y V ++ WVIDSGAS+ AT +++FF SYT GDFGSVRMGNDGS + + D
Subjt: GVKVRVQEVITEAKAGVTSL----------QMLSVTIAMKKAYKE--VLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIED
Query: VSL---------MMKVSAIPS---------------------TMTYGSTKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGL
V L + V IP + T+GSMVI +G K SSLY M A++++S IN V+D++ ELWH RL H+SEKGL
Subjt: VSL---------MMKVSAIPS---------------------TMTYGSTKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGL
Query: KILTKKNHLPDLKSTPLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFV
IL KKN L +K LKRC HCLAGK TRV FK+ +H RKP +L LV+SDVCGPMKTK+LGG+LYFVTF DDHSRKIWVYTLKTKDQVL FKQFHA V
Subjt: KILTKKNHLPDLKSTPLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFV
Query: ERKTGEKLKCVRTDSGCEYCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNII
ER++GEKLKC+RTD+G EY GPFDEYCR H IRHQK PPKTPQLNG+AER+N+TLVERVRCLLS+SQLP+SFWGEALNTVV+V NLTPCVPL +VP+ I
Subjt: ERKTGEKLKCVRTDSGCEYCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNII
Query: WSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDV-----------------------------------
WS +ISY HLRVFGCKAFVH+PKDERSKLDAKT+ CVF+GYGQDE GYR YDP +KKL+RSRDV
Subjt: WSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDV-----------------------------------
Query: ----IEDE----------------VQNEQFSDTYESFE-----HVGTEDSVQEQLAETVVPTDVSLRRSIRDRRPSTRYSPNESLLLTDG
+EDE V++E D ++ + V +D V EQ P+D+ LRRS RDR PSTRYS ++ +LLTDG
Subjt: ----IEDE----------------VQNEQFSDTYESFE-----HVGTEDSVQEQLAETVVPTDVSLRRSIRDRRPSTRYSPNESLLLTDG
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| TYJ98688.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.6e-200 | 66.38 | Show/hide |
Query: KVCGFMRLWMMKLKYQDGAPMLDHL---NTFQGILNQLS-----RMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGMLWLLKRGGGVKVRVQEVI
KVCGFMRLW+ +D L+H+ Q + N+L + IKFEDEI GLWVLGTLPDSW+IFRTSLSNSA NG+L + VK V
Subjt: KVCGFMRLWMMKLKYQDGAPMLDHL---NTFQGILNQLS-----RMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGMLWLLKRGGGVKVRVQEVI
Query: TEAKAGVTSLQMLSVTIAMKKAYK----EVLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIEDVSL---------MMKVSA
K+ +S+Q + + K V I++ WVIDSGASV ATSKREFFASYTPGDFGSVRMGNDG TN VGI DV L + V
Subjt: TEAKAGVTSLQMLSVTIAMKKAYK----EVLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIEDVSL---------MMKVSA
Query: IP------------------STMTYG---STKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKSTPLK
IP +T G TKGSMVI GQKFSSLYYMDAKI++ DINTVNDEANVELWHKRLSH+SEKGLKILTKKNHL DLKSTPLK
Subjt: IP------------------STMTYG---STKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKSTPLK
Query: RCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCE
RC HCLAGK TRVTFKSSQH RK N+L+LVHS+VCG MKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQV FKQFHA VER+TGEKLKC+RTD+G E
Subjt: RCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCE
Query: YCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKA
YCGPFDEYCRNH IRHQK PPK+ QLNGIA+RLN+TLVERVRCLL++SQLPQSFWGEALNTV++V NLTPCVPLGSEVPN IWSGKDISYSHLRVFGCKA
Subjt: YCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKA
Query: FVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDVIEDEVQN----EQFSDTYESFEHVGTEDSVQEQ
FVHVPKDERSKLDAKTK CVFLGYGQDEFGYR+YD KKKLIRSRDV+ E Q E+ + + E++++++
Subjt: FVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDVIEDEVQN----EQFSDTYESFEHVGTEDSVQEQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438HN89 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-193 | 47.97 | Show/hide |
Query: FTPHKPDNKTDKEWELCHRKVCGFMRLW----------------------------------------MMKLKYQDGAPMLDHLNTFQGILNQLSRMNIK
F +P+NKTD EW L HR+VCGF+R W MM LKYQDG P+ DHLNTFQGI+NQL+ MNIK
Subjt: FTPHKPDNKTDKEWELCHRKVCGFMRLW----------------------------------------MMKLKYQDGAPMLDHLNTFQGILNQLSRMNIK
Query: FEDEIHGLWVLGTLPDSWKIFRTSLSNSASNG----------------------------MLWLLKRG-------------------------------G
FE+E+ GLW+LGTLPDSW+ FRTSLSNSA +G +L + KRG G
Subjt: FEDEIHGLWVLGTLPDSWKIFRTSLSNSASNG----------------------------MLWLLKRG-------------------------------G
Query: GVKVRVQEVITEAKAGVTSL----------QMLSVTIAMKKAYKE--VLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIED
+K +++ + K G Q+ + T Y V ++ WVIDSGAS+ AT +++FF SYT GDFGSVRMGNDGS + + D
Subjt: GVKVRVQEVITEAKAGVTSL----------QMLSVTIAMKKAYKE--VLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIED
Query: VSL---------MMKVSAIPS---------------------TMTYGSTKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGL
V L + V IP + T+GSMVI +G K SSLY M A++++S IN V+D++ ELWH RL H+SEKGL
Subjt: VSL---------MMKVSAIPS---------------------TMTYGSTKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGL
Query: KILTKKNHLPDLKSTPLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFV
IL KKN L +K LKRC HCLAGK TRV FK+ +H RKP +L LV+SDVCGPMKTK+LGG+LYFVTF DDHSRKIWVYTLKTKDQVL FKQFHA V
Subjt: KILTKKNHLPDLKSTPLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFV
Query: ERKTGEKLKCVRTDSGCEYCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNII
ER++GEKLKC+RTD+G EY GPFDEYCR H IRHQK PPKTPQLNG+AER+N+TLVERVRCLLS+SQLP+SFWGEALNTVV+V NLTPCVPL +VP+ I
Subjt: ERKTGEKLKCVRTDSGCEYCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNII
Query: WSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDV-----------------------------------
WS +ISY HLRVFGCKAFVH+PKDERSKLDAKT+ CVF+GYGQDE GYR YDP +KKL+RSRDV
Subjt: WSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDV-----------------------------------
Query: ----IEDE----------------VQNEQFSDTYESFE-----HVGTEDSVQEQLAETVVPTDVSLRRSIRDRRPSTRYSPNESLLLTDG
+EDE V++E D ++ + V +D V EQ P+D+ LRRS RDR PSTRYS ++ +LLTDG
Subjt: ----IEDE----------------VQNEQFSDTYESFE-----HVGTEDSVQEQLAETVVPTDVSLRRSIRDRRPSTRYSPNESLLLTDG
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| A0A5A7TFU1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.4e-200 | 66.21 | Show/hide |
Query: KVCGFMRLWMMKLKYQDGAPMLDHL---NTFQGILNQLS-----RMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGMLWLLKRGGGVKVRVQEVI
KVCGFMRLW+ +D L+H+ Q + N+L + IKFEDEI GLWVLGTLPDSW+IFRTSLSNSA NG+L + VK V
Subjt: KVCGFMRLWMMKLKYQDGAPMLDHL---NTFQGILNQLS-----RMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGMLWLLKRGGGVKVRVQEVI
Query: TEAKAGVTSLQMLSVTIAMKKAYK----EVLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIEDVSL---------MMKVSA
K+ +S+Q + + K V I++ WVIDSGASV ATSKREFFASYTPGDFGSVRMGNDG TN VGI DV L + V
Subjt: TEAKAGVTSLQMLSVTIAMKKAYK----EVLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIEDVSL---------MMKVSA
Query: IP------------------STMTYG---STKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKSTPLK
IP +T G TKGSMVI GQKFSSLYYMDAKI++ DINTVNDEANVELWHKRLSH+SEKGLKILTKKNHL DLKSTPLK
Subjt: IP------------------STMTYG---STKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKSTPLK
Query: RCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCE
RC HCLAGK TRVTFKSSQH RK N+L+LVHS+VCG MKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQV FKQFHA VER+TGEKLKC+RTD+G E
Subjt: RCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCE
Query: YCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKA
YCGPFDEYCRNH IRHQK PPK+ QLNGIA+RLN+TLVERVRCLL++SQLPQSFWGEALNTV++V NLTPCVPLGSEVPN IWSGKDISYSHLRVFGCKA
Subjt: YCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKA
Query: FVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDVIEDEVQN----EQFSDTYESFEHVGTEDSVQEQ
FVHVPKDERSKLDAKTK CVFLGYGQDEFGYR+Y KKKLIRSRDV+ E Q E+ + + E++++++
Subjt: FVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDVIEDEVQN----EQFSDTYESFEHVGTEDSVQEQ
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| A0A5D3BKF7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.6e-201 | 66.38 | Show/hide |
Query: KVCGFMRLWMMKLKYQDGAPMLDHL---NTFQGILNQLS-----RMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGMLWLLKRGGGVKVRVQEVI
KVCGFMRLW+ +D L+H+ Q + N+L + IKFEDEI GLWVLGTLPDSW+IFRTSLSNSA NG+L + VK V
Subjt: KVCGFMRLWMMKLKYQDGAPMLDHL---NTFQGILNQLS-----RMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGMLWLLKRGGGVKVRVQEVI
Query: TEAKAGVTSLQMLSVTIAMKKAYK----EVLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIEDVSL---------MMKVSA
K+ +S+Q + + K V I++ WVIDSGASV ATSKREFFASYTPGDFGSVRMGNDG TN VGI DV L + V
Subjt: TEAKAGVTSLQMLSVTIAMKKAYK----EVLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIEDVSL---------MMKVSA
Query: IP------------------STMTYG---STKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKSTPLK
IP +T G TKGSMVI GQKFSSLYYMDAKI++ DINTVNDEANVELWHKRLSH+SEKGLKILTKKNHL DLKSTPLK
Subjt: IP------------------STMTYG---STKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKSTPLK
Query: RCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCE
RC HCLAGK TRVTFKSSQH RK N+L+LVHS+VCG MKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQV FKQFHA VER+TGEKLKC+RTD+G E
Subjt: RCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCE
Query: YCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKA
YCGPFDEYCRNH IRHQK PPK+ QLNGIA+RLN+TLVERVRCLL++SQLPQSFWGEALNTV++V NLTPCVPLGSEVPN IWSGKDISYSHLRVFGCKA
Subjt: YCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKA
Query: FVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDVIEDEVQN----EQFSDTYESFEHVGTEDSVQEQ
FVHVPKDERSKLDAKTK CVFLGYGQDEFGYR+YD KKKLIRSRDV+ E Q E+ + + E++++++
Subjt: FVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDVIEDEVQN----EQFSDTYESFEHVGTEDSVQEQ
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| A0A5D3CVK2 Putative retrotransposon | 7.6e-201 | 60.53 | Show/hide |
Query: MNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGML------------WLLKRGGGVKVRVQEVITEAKAGVTSLQMLSVTIAMKKA-----------
MNIKFE+EIHGLWVLG L DSW+IFRTSLSNSA NG+L + ++ V+ ++TE + S + + K+
Subjt: MNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGML------------WLLKRGGGVKVRVQEVITEAKAGVTSLQMLSVTIAMKKA-----------
Query: --------YKEVLSKIEKRH----------------------------------------WVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTV
Y L + K H WVIDSGASV ATSK +FFASYTP DFGSVRMGNDGS N V
Subjt: --------YKEVLSKIEKRH----------------------------------------WVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTV
Query: GIEDVSL-----------MMKVSAIPSTM------------------TYGSTKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISE
GI DV L + +S I + + TKGS+VI +G KFSSLYYMDAKI++SDINTVNDE N+ELWHKRLSH+SE
Subjt: GIEDVSL-----------MMKVSAIPSTM------------------TYGSTKGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISE
Query: KGLKILTKK-----------NHLPDLKSTPLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTK
KGLKILTKK NHLPDLKSTPLKRC HCLAGK TRVTFKSSQH RKPN+L+LVHS+VCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTK
Subjt: KGLKILTKK-----------NHLPDLKSTPLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTK
Query: DQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEYCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNL
DQVLQ FKQFHA VER+TGEKLKC+RTD+G EYCGPFDEYCRNH IRHQK PPKTPQLNGIAERLN+TLVERVRCLLS+SQLPQSFWGEALNTVV+V NL
Subjt: DQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEYCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNL
Query: TPCVPLGSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDV---------------------
TPCVPLGSEVPN IWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTK CVFLGYGQDEFGYRLYDP KKKLIRSRDV
Subjt: TPCVPLGSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDV---------------------
Query: ------------------IEDEVQNEQFSDTYESFEHVGTEDSVQE
IEDE+QNEQF DT ES E VG EDSVQE
Subjt: ------------------IEDEVQNEQFSDTYESFEHVGTEDSVQE
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| A5C3L0 Integrase catalytic domain-containing protein | 7.4e-196 | 48.65 | Show/hide |
Query: IKDYSEDFDFGPWFFTPHKPDNKTDKEWELCHRKVCGFMRLW----------------------------------------MMKLKYQDGAPMLDHLNT
+KDY + P F +P+NK D EW L HR+VCG++R W MM LKYQDG PM DHLNT
Subjt: IKDYSEDFDFGPWFFTPHKPDNKTDKEWELCHRKVCGFMRLW----------------------------------------MMKLKYQDGAPMLDHLNT
Query: FQGILNQLSRMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGML------------WLLKRGGGVKVRVQEVITEAKA------------------
FQGI+NQL MNIKFE+E+ GLW+LGTLP+ W+ FRTSLSNSA +G++ + ++ G + ++TE K
Subjt: FQGILNQLSRMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSNSASNGML------------WLLKRGGGVKVRVQEVITEAKA------------------
Query: ---------------------------------------GVTSLQMLSVTIAMKKAYKE--VLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVR
G Q+ + T Y V ++ WVIDSGAS+ AT +++FF SYT GDFGSVR
Subjt: ---------------------------------------GVTSLQMLSVTIAMKKAYKE--VLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVR
Query: MGNDGSTNTVGIEDVSLMMKVSAIPSTMTYGST-KGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKST
MGNDGS +G+ D SLMMK SA PS + GS+ +GSMVI +G K SSLY M A++++S IN V+D++ ELWH RL H+SEKGL IL K N L +K
Subjt: MGNDGSTNTVGIEDVSLMMKVSAIPSTMTYGST-KGSMVIPQGQKFSSLYYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKST
Query: PLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDS
LKRC HCLAGK TRV FK+ +H RKP + LV+SDVCGPMKTK+LGG+LYFVTF DDHSRKIWVYTLKTKDQVL FKQFHA VER++GEKLKC+RTD+
Subjt: PLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDS
Query: GCEYCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFG
G EY GPFDEYCR HDIRHQK PPKTPQLNG+AER+N+TLVERVRCLLS+SQLP+SFW EALNTVV+V NLTPCVPL +V + IWS +ISY HLRVFG
Subjt: GCEYCGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFG
Query: CKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDV---------------------------------------IEDEVQNEQF-
CKAFVH+PKDERSKLD KT+ CVF+GYGQDE GYR YDP +KKL+RSRDV +EDE ++Q
Subjt: CKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDV---------------------------------------IEDEVQNEQF-
Query: -----------SDTYESFEHVG---------TEDSVQEQLAETVVPTDVSLRRSIRDRRPSTRYSPNESLLLTDG
+T++ +G +D V EQ P+D+ LRR RDR PSTRYS ++ +LLTDG
Subjt: -----------SDTYESFEHVG---------TEDSVQEQLAETVVPTDVSLRRSIRDRRPSTRYSPNESLLLTDG
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 8.8e-45 | 35.09 | Show/hide |
Query: NVELWHKRLSHISEKGLKILTKKNHLPD---LKSTPL--KRCLHCLAGKHTRVTF---KSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHS
N LWH+R HIS+ L + +KN D L + L + C CL GK R+ F K H+++P L +VHSDVCGP+ +L YFV F D +
Subjt: NVELWHKRLSHISEKGLKILTKKNHLPD---LKSTPL--KRCLHCLAGKHTRVTF---KSSQHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHS
Query: RKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEY-CGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWG
Y +K K V F+ F A E K+ + D+G EY ++C I + P TPQLNG++ER+ +T+ E+ R ++S ++L +SFWG
Subjt: RKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEY-CGPFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWG
Query: EALNTVVYVFNLTPCVPL--GSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDVIEDEVQN
EA+ T Y+ N P L S+ P +W K HLRVFG +VH+ K+++ K D K+ +F+GY + G++L+D +K I +RDV+ DE
Subjt: EALNTVVYVFNLTPCVPL--GSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSRDVIEDEVQN
Query: EQFSDTYESFEHVGTEDSVQEQ
+ FE V +DS + +
Subjt: EQFSDTYESFEHVGTEDSVQEQ
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-120 | 37.84 | Show/hide |
Query: FMRLWMMKLKYQDGAPMLDHLNTFQGILNQLSRMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSN--------SASNGMLWLLKRGGGVKVRVQEVITEAK
+++ + L +G L HLN F G++ QL+ + +K E+E + +L +LP S+ T++ + ++ +L K + + Q +ITE +
Subjt: FMRLWMMKLKYQDGAPMLDHLNTFQGILNQLSRMNIKFEDEIHGLWVLGTLPDSWKIFRTSLSN--------SASNGMLWLLKRGGGVKVRVQEVITEAK
Query: A--------------------------------------------------GVTSLQML-SVTIAMKKAYKEVLSKIEKR-----------HWVIDSGAS
G TS Q T AM + V+ I + WV+D+ AS
Subjt: A--------------------------------------------------GVTSLQML-SVTIAMKKAYKEVLSKIEKR-----------HWVIDSGAS
Query: VRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIEDV--------SLMMK-VSAIP---------------------STMTYGSTKGSMVIPQGQKFSSL
AT R+ F Y GDFG+V+MGN + GI D+ +L++K V +P + + TKGS+VI +G +L
Subjt: VRATSKREFFASYTPGDFGSVRMGNDGSTNTVGIEDV--------SLMMK-VSAIP---------------------STMTYGSTKGSMVIPQGQKFSSL
Query: YYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKSTPLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGA
Y +A+I + ++N DE +V+LWHKR+ H+SEKGL+IL KK+ + K T +K C +CL GK RV+F++S RK N+L LV+SDVCGPM+ +S+GG
Subjt: YYMDAKIMESDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLKSTPLKRCLHCLAGKHTRVTFKSSQHLRKPNLLKLVHSDVCGPMKTKSLGGA
Query: LYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEYCG-PFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLL
YFVTF DD SRK+WVY LKTKDQV Q F++FHA VER+TG KLK +R+D+G EY F+EYC +H IRH+K P TPQ NG+AER+N+T+VE+VR +L
Subjt: LYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEYCG-PFDEYCRNHDIRHQKAPPKTPQLNGIAERLNKTLVERVRCLL
Query: SKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSR
++LP+SFWGEA+ T Y+ N +P VPL E+P +W+ K++SYSHL+VFGC+AF HVPK++R+KLD K+ C+F+GYG +EFGYRL+DP KKK+IRSR
Subjt: SKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYGQDEFGYRLYDPTKKKLIRSR
Query: DVIEDEVQNEQFSDTYESFEHVGTEDSVQEQLAETVVPTDVSLRRSIRDRRPSTRYSPNESLLLTD
DV+ E V T + E++ ++P V++ PST +P + TD
Subjt: DVIEDEVQNEQFSDTYESFEHVGTEDSVQEQLAETVVPTDVSLRRSIRDRRPSTRYSPNESLLLTD
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| Q12337 Transposon Ty2-GR1 Gag-Pol polyprotein | 1.2e-20 | 25.6 | Show/hide |
Query: SSLYYMDAKIMESDINTVNDEANVE-----LWHKRLSHISEKGLKILTKKNHLPDLKSTPLK-------RCLHCLAGKHTRVTFKSSQHLRKPNL---LK
S Y + + I + IN VN +V L H+ L H + + ++ KKN + LK + ++ +C CL GK T+ L+ +
Subjt: SSLYYMDAKIMESDINTVNDEANVE-----LWHKRLSHISEKGLKILTKKNHLPDLKSTPLK-------RCLHCLAGKHTRVTFKSSQHLRKPNL---LK
Query: LVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTL--KTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEYCG-PFDEYCRNHDIRHQKAPPKTPQ
+H+D+ GP+ YF++FTD+ +R WVY L + ++ +L F AF++ + ++ ++ D G EY ++ N I +
Subjt: LVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTL--KTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEYCG-PFDEYCRNHDIRHQKAPPKTPQ
Query: LNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFN-LTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGY
+G+AERLN+TL+ R LL S LP W A+ + N L S + +G DI + + FG V+ + SK+ + L
Subjt: LNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFN-LTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGY
Query: GQDEFGYRLYDPTKKKLIRSRDVIEDEVQNEQ
++ +GY +Y P+ KK + + + + +QN+Q
Subjt: GQDEFGYRLYDPTKKKLIRSRDVIEDEVQNEQ
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.5e-33 | 27.25 | Show/hide |
Query: SKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVG-IEDVSLMMK--------------------------------VSAIPSTMTY
S +W++DSGA+ TS + + P G M DGST + SL K V P++
Subjt: SKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGSTNTVG-IEDVSLMMK--------------------------------VSAIPSTMTY
Query: GSTKGSMVIPQGQKFSSLYYMDAKIME--SDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLK-STPLKRCLHCLAGKHTRVTFKSSQHLRKPN
+ + QG+ LY + S + + +A WH RL H + L + L L S C CL K +V F S +
Subjt: GSTKGSMVIPQGQKFSSLYYMDAKIME--SDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLK-STPLKRCLHCLAGKHTRVTFKSSQHLRKPN
Query: LLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEYCGPFDEYCRNHDIRHQKAPPKTPQ
L+ ++SDV S Y+V F D +R W+Y LK K QV + F F +E + ++ +D+G E+ + EY H I H +PP TP+
Subjt: LLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEYCGPFDEYCRNHDIRHQKAPPKTPQ
Query: LNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYG
NG++ER ++ +VE LLS + +P+++W A VY+ N P L E P G +Y LRVFGC + + + KLD K++ CVFLGY
Subjt: LNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKACVFLGYG
Query: QDEFGYRLYDPTKKKLIRSRDVIEDEVQNEQFSDTYESFEHVGTEDSVQEQLAET
+ Y +L SR V DE + + ++ T VQEQ E+
Subjt: QDEFGYRLYDPTKKKLIRSRDVIEDEVQNEQFSDTYESFEHVGTEDSVQEQLAET
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.0e-34 | 27.25 | Show/hide |
Query: KAYKEVLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGST-------------------------------NTVGIEDVSLMMKVSA--
+A V S +W++DSGA+ TS + + P G M DGST N + + + +VS
Subjt: KAYKEVLSKIEKRHWVIDSGASVRATSKREFFASYTPGDFGSVRMGNDGST-------------------------------NTVGIEDVSLMMKVSA--
Query: IPSTMTYGSTKGSMVIPQGQKFSSLYYMDAKIME--SDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLK-STPLKRCLHCLAGKHTRVTFKSS
P++ + + QG+ LY + S + +A WH RL H S L + + LP L S L C C K +V F +S
Subjt: IPSTMTYGSTKGSMVIPQGQKFSSLYYMDAKIME--SDINTVNDEANVELWHKRLSHISEKGLKILTKKNHLPDLK-STPLKRCLHCLAGKHTRVTFKSS
Query: QHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEYCGPFDEYCRNHDIRHQK
+ L+ ++SDV S+ Y+V F D +R W+Y LK K QV F F + VE + ++ + +D+G E+ +Y H I H
Subjt: QHLRKPNLLKLVHSDVCGPMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQVLQAFKQFHAFVERKTGEKLKCVRTDSGCEYCGPFDEYCRNHDIRHQK
Query: APPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKA
+PP TP+ NG++ER ++ +VE LLS + +P+++W A + VY+ N P L + P G+ +Y L+VFGC + + R KL+ K+K
Subjt: APPKTPQLNGIAERLNKTLVERVRCLLSKSQLPQSFWGEALNTVVYVFNLTPCVPLGSEVPNIIWSGKDISYSHLRVFGCKAFVHVPKDERSKLDAKTKA
Query: CVFLGYGQDEFGYRLYDPTKKKLIRSRDVIEDE
C F+GY + Y +L SR V DE
Subjt: CVFLGYGQDEFGYRLYDPTKKKLIRSRDVIEDE
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