; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G17450 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G17450
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:15661664..15662267
RNA-Seq ExpressionCSPI06G17450
SyntenyCSPI06G17450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575081.1 hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1156.25Show/hide
Query:  NLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKQGAVVTSDHLAKTRGGIVITTWRS
        +LA+IG EGF LID++FGRA  T  RR  A    RPA  Q P K AEQPP K +EK    V  + +AK RGGIVITTWR+
Subjt:  NLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKQGAVVTSDHLAKTRGGIVITTWRS

KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]4.2e-0953.09Show/hide
Query:  ANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKQGAVVTSDHLAKTRGGIVITTWRS
        A+LA+IG EGF+LID++FGR   T  RR   A   RPA  Q P K AEQPP K +EK    V  + +A+ RGG+VITTWR+
Subjt:  ANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKQGAVVTSDHLAKTRGGIVITTWRS

KGN47421.1 hypothetical protein Csa_021737 [Cucumis sativus]2.1e-4598.98Show/hide
Query:  MGRREREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKQGAVVTSDHLAKTRGGIVITTWRSYAKRK
        MGRREREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPP KTKEKQGAVVTSDHLAKTRGGIVITTWRSYAKRK
Subjt:  MGRREREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKQGAVVTSDHLAKTRGGIVITTWRSYAKRK

KGN47422.1 hypothetical protein Csa_021740 [Cucumis sativus]1.5e-1964.52Show/hide
Query:  REREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKQGAVVTSDHLAKTRGGIVITTWRSYAK
        REREI  +  +LA+IG EGF++ID++FGRAS+TG RRV A T  RPA  QPPRK AEQPP   KEK  A VTSD +AK  GG VITTWR YAK
Subjt:  REREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKQGAVVTSDHLAKTRGGIVITTWRSYAK

XP_023548315.1 multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo]9.1e-0457.89Show/hide
Query:  ANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEK
        A+LA+IG EGF+LID++FGR   T  RR  AA   RPA  Q P K AEQPP K +EK
Subjt:  ANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEK

TrEMBL top hitse value%identityAlignment
A0A0A0KG95 Uncharacterized protein7.5e-2064.52Show/hide
Query:  REREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKQGAVVTSDHLAKTRGGIVITTWRSYAK
        REREI  +  +LA+IG EGF++ID++FGRAS+TG RRV A T  RPA  QPPRK AEQPP   KEK  A VTSD +AK  GG VITTWR YAK
Subjt:  REREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKQGAVVTSDHLAKTRGGIVITTWRSYAK

A0A0A0KI19 Uncharacterized protein1.0e-4598.98Show/hide
Query:  MGRREREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKQGAVVTSDHLAKTRGGIVITTWRSYAKRK
        MGRREREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPP KTKEKQGAVVTSDHLAKTRGGIVITTWRSYAKRK
Subjt:  MGRREREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKQGAVVTSDHLAKTRGGIVITTWRSYAKRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGAGAGAGAGAGAAATTATAGATACTGATGCTAACCTGGCGCGGATTGGGATTGAAGGATTCAAACTGATTGACAAATTCTTCGGTCGAGCCTCGACAACGGG
CGGTAGAAGGGTAGTGGCGGCAACGGAGATGAGGCCAGCTCAGATGCAGCCACCGCGTAAGGTGGCCGAGCAACCACCTTTGAAGACGAAAGAGAAACAGGGGGCAGTGG
TGACTTCTGATCATTTGGCCAAAACCCGCGGCGGGATCGTGATAACAACTTGGCGTTCGTATGCAAAACGGAAATAG
mRNA sequenceShow/hide mRNA sequence
AACTACTATATAATGCACCAAAAACCAAACGAAGCTTCACAACCCATTCCAAAACAAATTCCTTTTTTTTCTTAATCTTCGGGAATTATGGGTAGGAGAGAGAGAGAAAT
TATAGATACTGATGCTAACCTGGCGCGGATTGGGATTGAAGGATTCAAACTGATTGACAAATTCTTCGGTCGAGCCTCGACAACGGGCGGTAGAAGGGTAGTGGCGGCAA
CGGAGATGAGGCCAGCTCAGATGCAGCCACCGCGTAAGGTGGCCGAGCAACCACCTTTGAAGACGAAAGAGAAACAGGGGGCAGTGGTGACTTCTGATCATTTGGCCAAA
ACCCGCGGCGGGATCGTGATAACAACTTGGCGTTCGTATGCAAAACGGAAATAGCTTTGCTTTTCTGATCTAAAAGTAAAGGGATGGATGCTTGTAATACATAAATAAAC
AAATTTAGGTAACTACGAGCCTGCAGTTGAGTATATATTTAACTGCACTATATATATATATATGTATGTATGTATAAAGTATATGTATGAGTACTTAACTATAGCTTTGG
TTATGTTGTTTCTTGGGCTCTTCAGTATTATAAAAAATTATGCATGTTTTGAAC
Protein sequenceShow/hide protein sequence
MGRREREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKQGAVVTSDHLAKTRGGIVITTWRSYAKRK