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CSPI06G17470 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G17470
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:15667849..15668133
RNA-Seq ExpressionCSPI06G17470
SyntenyCSPI06G17470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575081.1 hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1767.95Show/hide
Query:  RGDLAKIGREGFQIIDEYFGRASSTGATRVAAKTARPALPQPPCKAEQPPRIRKEKPLAAVTSDQVAKHGGGTVITTW
        RGDLAKIGREGF +IDEYFGRA +T     A   ARPALPQ PCKAEQPPR ++EK   AV  +QVAK  GG VITTW
Subjt:  RGDLAKIGREGFQIIDEYFGRASSTGATRVAAKTARPALPQPPCKAEQPPRIRKEKPLAAVTSDQVAKHGGGTVITTW

KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]6.4e-1562.82Show/hide
Query:  RGDLAKIGREGFQIIDEYFGRASSTGATRVAAKTARPALPQPPCKAEQPPRIRKEKPLAAVTSDQVAKHGGGTVITTW
        R DLAKIGREGF++IDEYFGR  +T    V    ARPALPQ PCKAEQPPR  +EK    V  +QVA+  GG VITTW
Subjt:  RGDLAKIGREGFQIIDEYFGRASSTGATRVAAKTARPALPQPPCKAEQPPRIRKEKPLAAVTSDQVAKHGGGTVITTW

KGN47421.1 hypothetical protein Csa_021737 [Cucumis sativus]2.6e-1661.29Show/hide
Query:  REREIRGSRGDLAKIGREGFQIIDEYFGRASSTGATRVAAKT-ARPALPQPPCK-AEQPPRIRKEKPLAAVTSDQVAKHGGGTVITTWGPYAK
        REREI  +  +LA+IG EGF++ID++FGRAS+TG  RV A T  RPA  QPP K AEQPP   KEK  A VTSD +AK  GG VITTW  YAK
Subjt:  REREIRGSRGDLAKIGREGFQIIDEYFGRASSTGATRVAAKT-ARPALPQPPCK-AEQPPRIRKEKPLAAVTSDQVAKHGGGTVITTWGPYAK

KGN47422.1 hypothetical protein Csa_021740 [Cucumis sativus]6.2e-4295.79Show/hide
Query:  MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGATRVAAKTARPALPQPPCKAEQPPRIRKEKPLAAVTSDQVAKHGGGTVITTWGPYAK
        MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGA RVAAKTARPALPQPP KAEQPPRIRKEKP+AAVTSDQVAKHGGGTVITTW PYAK
Subjt:  MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGATRVAAKTARPALPQPPCKAEQPPRIRKEKPLAAVTSDQVAKHGGGTVITTWGPYAK

XP_023548315.1 multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo]6.2e-1061.54Show/hide
Query:  RGDLAKIGREGFQIIDEYFGRASSTGATRVAAKTARPALPQPPCKAEQPPRIRKEKPLAAVTSDQ
        R DLAKIGREGF++IDEYFGR  +T     AA   RPALPQ PCKAEQPPR  +EK    V  +Q
Subjt:  RGDLAKIGREGFQIIDEYFGRASSTGATRVAAKTARPALPQPPCKAEQPPRIRKEKPLAAVTSDQ

TrEMBL top hitse value%identityAlignment
A0A0A0KG95 Uncharacterized protein3.0e-4295.79Show/hide
Query:  MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGATRVAAKTARPALPQPPCKAEQPPRIRKEKPLAAVTSDQVAKHGGGTVITTWGPYAK
        MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGA RVAAKTARPALPQPP KAEQPPRIRKEKP+AAVTSDQVAKHGGGTVITTW PYAK
Subjt:  MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGATRVAAKTARPALPQPPCKAEQPPRIRKEKPLAAVTSDQVAKHGGGTVITTWGPYAK

A0A0A0KI19 Uncharacterized protein1.3e-1661.29Show/hide
Query:  REREIRGSRGDLAKIGREGFQIIDEYFGRASSTGATRVAAKT-ARPALPQPPCK-AEQPPRIRKEKPLAAVTSDQVAKHGGGTVITTWGPYAK
        REREI  +  +LA+IG EGF++ID++FGRAS+TG  RV A T  RPA  QPP K AEQPP   KEK  A VTSD +AK  GG VITTW  YAK
Subjt:  REREIRGSRGDLAKIGREGFQIIDEYFGRASSTGATRVAAKT-ARPALPQPPCK-AEQPPRIRKEKPLAAVTSDQVAKHGGGTVITTWGPYAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTCTGAGAGAAAGAGAAATTAGGGGTTCTCGTGGTGACCTGGCGAAGATTGGGAGAGAGGGGTTCCAAATAATTGATGAATACTTTGGTCGAGCATCGTCGAC
AGGGGCGACACGGGTGGCGGCGAAGACGGCAAGGCCAGCTTTGCCGCAACCACCATGTAAGGCGGAGCAGCCTCCAAGGATAAGGAAGGAAAAACCCTTGGCCGCCGTGA
CCTCCGATCAAGTGGCTAAACATGGCGGCGGAACCGTGATAACAACTTGGGGTCCGTATGCAAAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTCTGAGAGAAAGAGAAATTAGGGGTTCTCGTGGTGACCTGGCGAAGATTGGGAGAGAGGGGTTCCAAATAATTGATGAATACTTTGGTCGAGCATCGTCGAC
AGGGGCGACACGGGTGGCGGCGAAGACGGCAAGGCCAGCTTTGCCGCAACCACCATGTAAGGCGGAGCAGCCTCCAAGGATAAGGAAGGAAAAACCCTTGGCCGCCGTGA
CCTCCGATCAAGTGGCTAAACATGGCGGCGGAACCGTGATAACAACTTGGGGTCCGTATGCAAAA
Protein sequenceShow/hide protein sequence
MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGATRVAAKTARPALPQPPCKAEQPPRIRKEKPLAAVTSDQVAKHGGGTVITTWGPYAK