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CSPI06G17900 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G17900
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionextensin-3-like
Genome locationChr6:16263812..16264236
RNA-Seq ExpressionCSPI06G17900
SyntenyCSPI06G17900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3004608.1 extensin-2-like isoform X1 [Olea europaea subsp. europaea]2.1e-0448.84Show/hide
Query:  PPPAK-YKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNWP----QKFNRNSPPPP
        PPP K Y++K PP P KK + ++ PP P KK Y++K PPPP KK   +KSPP P  PP+  S PPP+Y  P    + +   SPPPP
Subjt:  PPPAK-YKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNWP----QKFNRNSPPPP

KAF3445529.1 hypothetical protein FNV43_RR10705 [Rhamnella rubrinervis]1.6e-0448.89Show/hide
Query:  APPPAKYKFKPP-------PSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNWPQK-FNRNSPPPP
        A PP  YK  PP       PSP KK + ++ PP P KK Y +K PPPP KK  ++KSPP    PP PPS PPP  + P+K ++  SPPPP
Subjt:  APPPAKYKFKPP-------PSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNWPQK-FNRNSPPPP

KAF9855548.1 hypothetical protein H0E87_006947 [Populus deltoides]9.5e-0546.51Show/hide
Query:  PPPAKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNW-----PQKFNRNSPPPP
        PPP  YK+K PP P KK +K++ PP P    YK+K PPPP KK   +KSPP P      P  PPP Y +     P  +   SPPPP
Subjt:  PPPAKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNW-----PQKFNRNSPPPP

KAG5525233.1 hypothetical protein RHGRI_031789 [Rhododendron griersonianum]2.1e-0450Show/hide
Query:  APPPAKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNWPQKFNRNSPPPP
        +PPP  YK+K PP P KK + ++ PP P KK Y +K PPPP KK   +KSPP P  PP+  S PPP    P  +   SPPPP
Subjt:  APPPAKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNWPQKFNRNSPPPP

TYK29731.1 hypothetical protein E5676_scaffold63236G00010 [Cucumis melo var. makuwa]1.8e-3591.76Show/hide
Query:  HGAPPPAKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNWPQKFNRNSPPPPF
        +GAPPP KYKF+PPPSPAKKRHKFRPPP P KKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKY+WP+KFNRNSPPPPF
Subjt:  HGAPPPAKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNWPQKFNRNSPPPPF

TrEMBL top hitse value%identityAlignment
A0A1J7H4L5 Uncharacterized protein2.3e-0444.68Show/hide
Query:  HGAPPPAKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLP-----FMPPLPP-----SRPPPKYNWPQKFNRNSPPPP
        + +PPP  YK+K PP P KK +K+  PP P KK YK+  PPPP KK   + SPP P     +  P PP     S PPP ++ P  +  +SPPPP
Subjt:  HGAPPPAKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLP-----FMPPLPP-----SRPPPKYNWPQKFNRNSPPPP

A0A2Z6PKA6 Uncharacterized protein3.9e-0445.65Show/hide
Query:  APPPAKYKFKPPPSPAKKRHKFRPPPL-----PTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPP-----SRPPPKYNWPQKFNRNSPPPP
        +PPP  YK+K PP P  K +K  PPP+     P    YK+K PPPP KK   + SPP P+  P PP     S PPP Y+ P  +   SPPPP
Subjt:  APPPAKYKFKPPPSPAKKRHKFRPPPL-----PTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPP-----SRPPPKYNWPQKFNRNSPPPP

A0A5D3E2A1 Uncharacterized protein8.6e-3691.76Show/hide
Query:  HGAPPPAKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNWPQKFNRNSPPPPF
        +GAPPP KYKF+PPPSPAKKRHKFRPPP P KKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKY+WP+KFNRNSPPPPF
Subjt:  HGAPPPAKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNWPQKFNRNSPPPPF

A0A6A4P0S9 Putative Extensin domain-containing protein3.9e-0445.45Show/hide
Query:  HGAPPPAKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPP----SRPPPKYNWPQKFNRNSPPPP
        + +PPP  YK+K PP P    +K++ PP P KK YK+  PPPP  K   +KSPP P   P PP    S PPP ++ P  +   SPPPP
Subjt:  HGAPPPAKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPP----SRPPPKYNWPQKFNRNSPPPP

A0A6P5TSU9 extensin-3-like3.0e-0445.88Show/hide
Query:  HGAPPP-AKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNWPQKFNRNSPPPP
        H  PPP A Y +K PP P KK + ++ PP P KK Y +K PPPP KK  ++KSPP    PP PP +P         ++ +SPPPP
Subjt:  HGAPPP-AKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNWPQKFNRNSPPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCACGGCGCACCACCACCAGCCAAATACAAGTTCAAGCCGCCACCATCGCCAGCCAAGAAAAGACACAAATTCAGGCCGCCGCCATTGCCAACCAAGAAAAGATA
CAAATTCAAGCCTCCCCCACCGCCAGCCAAGAAAAGAGATAACTTCAAGTCGCCGCCATTGCCATTCATGCCACCGCTACCACCGTCACGGCCACCACCAAAGTACAATT
GGCCACAAAAGTTCAATCGTAACTCGCCTCCACCTCCTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCACGGCGCACCACCACCAGCCAAATACAAGTTCAAGCCGCCACCATCGCCAGCCAAGAAAAGACACAAATTCAGGCCGCCGCCATTGCCAACCAAGAAAAGATA
CAAATTCAAGCCTCCCCCACCGCCAGCCAAGAAAAGAGATAACTTCAAGTCGCCGCCATTGCCATTCATGCCACCGCTACCACCGTCACGGCCACCACCAAAGTACAATT
GGCCACAAAAGTTCAATCGTAACTCGCCTCCACCTCCTTTCTAA
Protein sequenceShow/hide protein sequence
MGHGAPPPAKYKFKPPPSPAKKRHKFRPPPLPTKKRYKFKPPPPPAKKRDNFKSPPLPFMPPLPPSRPPPKYNWPQKFNRNSPPPPF