; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G17950 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G17950
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:16298945..16299612
RNA-Seq ExpressionCSPI06G17950
SyntenyCSPI06G17950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647172.1 hypothetical protein Csa_019044 [Cucumis sativus]5.9e-5890.7Show/hide
Query:  RSAQTDTKNRKSKSAVENNGVLSEKGNGFEFVQAQALWKSIQAFFTPKCTFAGTAALQLVSKIINPFEVNRWLCYSDSQYREVPRYLQRKKSPHQKQKLD
        RSAQ DTKNRKSKSAVENNGVLSEKGNGFEFVQAQALWKSIQAFFTPKCTFAGTAALQLVSKIINPFEVNRWLCYSDSQYREVPRYLQRK+SPHQKQKLD
Subjt:  RSAQTDTKNRKSKSAVENNGVLSEKGNGFEFVQAQALWKSIQAFFTPKCTFAGTAALQLVSKIINPFEVNRWLCYSDSQYREVPRYLQRKKSPHQKQKLD

Query:  YSHLAAANTDHPENPH--KVFYILNPLSH
        YSHLAAANTDHPENPH   + Y  + +SH
Subjt:  YSHLAAANTDHPENPH--KVFYILNPLSH
KAG7018655.1 Sugar transporter ERD6-like 16, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-0855.42Show/hide
Query:  APRKSSWSPFNKNRSAQTDTKNRKSKSAVENNGVLSEKGNGFEFVQAQ------------------------ALWKSIQAFFT
        APR+SS +P N N SAQTD KN+KSKSAVEN GVLSEKG G EFVQAQ                        AL KS+QAFFT
Subjt:  APRKSSWSPFNKNRSAQTDTKNRKSKSAVENNGVLSEKGNGFEFVQAQ------------------------ALWKSIQAFFT
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACCAAGAGAGTATTTGCCTCCTTGAAAGCACCCAGAAAATCTTCTTGGAGTCCATTCAATAAAAACAGGTCAGCTCAAACAGACACTAAGAATCGAAAGTCGAAATCAGC
TGTAGAAAACAATGGCGTTCTGAGTGAAAAAGGCAACGGTTTTGAATTTGTACAAGCACAAGCGCTCTGGAAGTCAATACAGGCATTTTTCACTCCCAAGTGCACCTTTG
CTGGAACTGCTGCCCTTCAGCTGGTGTCCAAGATTATCAATCCTTTTGAAGTCAACAGGTGGCTGTGCTATAGTGATTCTCAGTATCGAGAAGTTCCTCGGTATCTTCAA
AGAAAAAAGTCACCACATCAGAAACAAAAGTTGGATTACTCTCATCTTGCAGCTGCAAATACTGACCATCCAGAGAACCCTCATAAAGTCTTCTATATACTGAATCCACT
GTCTCACACCTCCATTATTATGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ACCAAGAGAGTATTTGCCTCCTTGAAAGCACCCAGAAAATCTTCTTGGAGTCCATTCAATAAAAACAGGTCAGCTCAAACAGACACTAAGAATCGAAAGTCGAAATCAGC
TGTAGAAAACAATGGCGTTCTGAGTGAAAAAGGCAACGGTTTTGAATTTGTACAAGCACAAGCGCTCTGGAAGTCAATACAGGCATTTTTCACTCCCAAGTGCACCTTTG
CTGGAACTGCTGCCCTTCAGCTGGTGTCCAAGATTATCAATCCTTTTGAAGTCAACAGGTGGCTGTGCTATAGTGATTCTCAGTATCGAGAAGTTCCTCGGTATCTTCAA
AGAAAAAAGTCACCACATCAGAAACAAAAGTTGGATTACTCTCATCTTGCAGCTGCAAATACTGACCATCCAGAGAACCCTCATAAAGTCTTCTATATACTGAATCCACT
GTCTCACACCTCCATTATTATGAGCTAG
Protein sequenceShow/hide protein sequence
TKRVFASLKAPRKSSWSPFNKNRSAQTDTKNRKSKSAVENNGVLSEKGNGFEFVQAQALWKSIQAFFTPKCTFAGTAALQLVSKIINPFEVNRWLCYSDSQYREVPRYLQ
RKKSPHQKQKLDYSHLAAANTDHPENPHKVFYILNPLSHTSIIMS