; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G17990 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G17990
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:16342467..16343026
RNA-Seq ExpressionCSPI06G17990
SyntenyCSPI06G17990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058917.1 hypothetical protein E6C27_scaffold98G00860 [Cucumis melo var. makuwa]4.9e-6779.57Show/hide
Query:  MLNSPKSRKRKLKTPPQPPRATRAKTIEVEEPDGFGYMVEQLLFGSGSSGGSITDH-PSSSSDTPRDEYVPMGILSPTPISLPPVSPNDFTSTPLAPSTS
        M+N PKSRKRKLK  PQPPR T+AKTIEVEEPDG GYMVEQ L GSG SGGSI DH PSSSSD   D+YVPMGILSPTPISLPPVSPN FTST LAPS S
Subjt:  MLNSPKSRKRKLKTPPQPPRATRAKTIEVEEPDGFGYMVEQLLFGSGSSGGSITDH-PSSSSDTPRDEYVPMGILSPTPISLPPVSPNDFTSTPLAPSTS

Query:  EGELSIHDYGGWEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLPPLYYRPKFCKP
        E ELSI+DYGGWEEAATG V YP LESS IDPNN NNGGLS+ NS     SNLEPFVYPE M Y LPPIFKTPLPPLYYRPK  KP
Subjt:  EGELSIHDYGGWEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLPPLYYRPKFCKP

KAE8647158.1 hypothetical protein Csa_018821 [Cucumis sativus]2.6e-9799.46Show/hide
Query:  MLNSPKSRKRKLKTPPQPPRATRAKTIEVEEPDGFGYMVEQLLFGSGSSGGSITDHPSSSSDTPRDEYVPMGILSPTPISLPPVSPNDFTSTPLAPSTSE
        MLNSPKSRKRKLKTPPQPPRATRAKTIEVEEPDGFGYMVEQLLFGSGSSGGSITDHPSSSS+TPRDEYVPMGILSPTPISLPPVSPNDFTSTPLAPSTSE
Subjt:  MLNSPKSRKRKLKTPPQPPRATRAKTIEVEEPDGFGYMVEQLLFGSGSSGGSITDHPSSSSDTPRDEYVPMGILSPTPISLPPVSPNDFTSTPLAPSTSE

Query:  GELSIHDYGGWEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLPPLYYRPKFCKP
        GELSIHDYGGWEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLPPLYYRPKFCKP
Subjt:  GELSIHDYGGWEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLPPLYYRPKFCKP

KAG6578907.1 hypothetical protein SDJN03_23355, partial [Cucurbita argyrosperma subsp. sororia]9.3e-1035.38Show/hide
Query:  LNSPKSRKRKLKTPPQPPRATRA----------KTIEVEE-PDGFGYMVEQLLFGSGSSGGSITDHPSSSSDTPRDEYVPMGILSPTPISLPPVSPNDFT
        + S  +RKRK+K PP PPRA +A          K IEVEE    F +MV +    S S   S +D PS+S+ T                     S + F+
Subjt:  LNSPKSRKRKLKTPPQPPRATRA----------KTIEVEE-PDGFGYMVEQLLFGSGSSGGSITDHPSSSSDTPRDEYVPMGILSPTPISLPPVSPNDFT

Query:  STPLAPSTSEGELSIHDYGGWEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLPPLYYRPKFCKP
              S S  ELS++DY GWE+    +   P   SS I P    +G                 F Y   ++YPLPP+FK PLPPLYYRPKF  P
Subjt:  STPLAPSTSEGELSIHDYGGWEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLPPLYYRPKFCKP

XP_038885909.1 extensin-like [Benincasa hispida]8.2e-0632.52Show/hide
Query:  LNSPKSRKRKLKTPPQPPRATRA-------------KTIEVEEPDGFGYMVEQLLFGSGSSGGSITDHPSSSSD---TPRDEYVPMGILSPTPISLP-PV
        L    +  RK+K PP+PP+  +              K I+VE P  F Y+V+ L   +G        +P +S+D    P D+  P GILSPTP SLP  V
Subjt:  LNSPKSRKRKLKTPPQPPRATRA-------------KTIEVEEPDGFGYMVEQLLFGSGSSGGSITDHPSSSSD---TPRDEYVPMGILSPTPISLP-PV

Query:  SPNDFTST---------PLAPSTSEGELSIHD-YGGWEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLP
         P+ FT +         PL PS+S+ EL I D    W E A  + +YP ++S  + P       L  +    + N  + P  +  ++   +PP F TPLP
Subjt:  SPNDFTST---------PLAPSTSEGELSIHD-YGGWEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLP

Query:  PLYYRP
        PL++ P
Subjt:  PLYYRP

TrEMBL top hitse value%identityAlignment
A0A0A0KF90 Uncharacterized protein7.3e-6171.35Show/hide
Query:  MLNSPKSRKRKLKTPPQPPRATRAKTIEVEEPDGFGYMVEQLLFGSGSSGGSITDHPSSSSDTPRDEYVPMGILSPTPISLPPVSPNDFTSTPLAPSTSE
        MLNSPKSRKRKLKTPPQPPRATRAKTIEVEEPDGFGYMVEQLLFGSGSSGGSITDHPSSSS+TPRDEYVPMGILSPTPISLPPVSPNDFTSTPLAPSTSE
Subjt:  MLNSPKSRKRKLKTPPQPPRATRAKTIEVEEPDGFGYMVEQLLFGSGSSGGSITDHPSSSSDTPRDEYVPMGILSPTPISLPPVSPNDFTSTPLAPSTSE

Query:  GELSIHDYGGWEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLPPLYYRPKFCKP
        GELSIHDYGGWEEAATGM                                                    TPLPPLYYRPKFCKP
Subjt:  GELSIHDYGGWEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLPPLYYRPKFCKP

A0A5D3DJD1 Uncharacterized protein2.4e-6779.57Show/hide
Query:  MLNSPKSRKRKLKTPPQPPRATRAKTIEVEEPDGFGYMVEQLLFGSGSSGGSITDH-PSSSSDTPRDEYVPMGILSPTPISLPPVSPNDFTSTPLAPSTS
        M+N PKSRKRKLK  PQPPR T+AKTIEVEEPDG GYMVEQ L GSG SGGSI DH PSSSSD   D+YVPMGILSPTPISLPPVSPN FTST LAPS S
Subjt:  MLNSPKSRKRKLKTPPQPPRATRAKTIEVEEPDGFGYMVEQLLFGSGSSGGSITDH-PSSSSDTPRDEYVPMGILSPTPISLPPVSPNDFTSTPLAPSTS

Query:  EGELSIHDYGGWEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLPPLYYRPKFCKP
        E ELSI+DYGGWEEAATG V YP LESS IDPNN NNGGLS+ NS     SNLEPFVYPE M Y LPPIFKTPLPPLYYRPK  KP
Subjt:  EGELSIHDYGGWEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLPPLYYRPKFCKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAATTCACCAAAGTCCAGAAAGCGAAAATTGAAGACGCCGCCACAGCCGCCGAGGGCCACCAGAGCCAAGACGATTGAAGTGGAAGAACCCGATGGTTTCGGATA
TATGGTCGAACAACTCCTCTTCGGCAGCGGATCATCAGGTGGATCCATCACGGACCACCCTTCGTCTTCCTCCGATACCCCGCGGGATGAATATGTGCCTATGGGGATAC
TCTCACCAACCCCCATTTCTCTCCCGCCTGTTTCTCCAAACGATTTCACATCGACGCCGCTGGCACCCTCGACGTCAGAAGGAGAATTGAGTATTCACGATTACGGCGGC
TGGGAAGAGGCGGCAACGGGAATGGTAGCTTACCCTTTTCTTGAATCCTCTTTTATTGATCCCAATAACAATAATAATGGAGGATTATCAAGTTCAAATTCAAGTTCAAG
TTCAAACTCGAATTTAGAACCATTCGTATATCCTGAATCAATGTTGTATCCTCTTCCTCCCATTTTCAAGACTCCTCTACCCCCTCTTTACTATAGACCCAAATTTTGTA
AACCCTAA
mRNA sequenceShow/hide mRNA sequence
GGATGTTGAATTCACCAAAGTCCAGAAAGCGAAAATTGAAGACGCCGCCACAGCCGCCGAGGGCCACCAGAGCCAAGACGATTGAAGTGGAAGAACCCGATGGTTTCGGA
TATATGGTCGAACAACTCCTCTTCGGCAGCGGATCATCAGGTGGATCCATCACGGACCACCCTTCGTCTTCCTCCGATACCCCGCGGGATGAATATGTGCCTATGGGGAT
ACTCTCACCAACCCCCATTTCTCTCCCGCCTGTTTCTCCAAACGATTTCACATCGACGCCGCTGGCACCCTCGACGTCAGAAGGAGAATTGAGTATTCACGATTACGGCG
GCTGGGAAGAGGCGGCAACGGGAATGGTAGCTTACCCTTTTCTTGAATCCTCTTTTATTGATCCCAATAACAATAATAATGGAGGATTATCAAGTTCAAATTCAAGTTCA
AGTTCAAACTCGAATTTAGAACCATTCGTATATCCTGAATCAATGTTGTATCCTCTTCCTCCCATTTTCAAGACTCCTCTACCCCCTCTTTACTATAGACCCAAATTTTG
TAAACCCTAA
Protein sequenceShow/hide protein sequence
MLNSPKSRKRKLKTPPQPPRATRAKTIEVEEPDGFGYMVEQLLFGSGSSGGSITDHPSSSSDTPRDEYVPMGILSPTPISLPPVSPNDFTSTPLAPSTSEGELSIHDYGG
WEEAATGMVAYPFLESSFIDPNNNNNGGLSSSNSSSSSNSNLEPFVYPESMLYPLPPIFKTPLPPLYYRPKFCKP