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CSPI06G18000 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G18000
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionextensin-like
Genome locationChr6:16346257..16346694
RNA-Seq ExpressionCSPI06G18000
SyntenyCSPI06G18000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058916.1 hypothetical protein E6C27_scaffold98G00840 [Cucumis melo var. makuwa]1.3e-1940.72Show/hide
Query:  YPGREGRKQVLQISKDSQTIKKPPL----APVIRYKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSP-----------------
        +P  EG K +LQIS +S+ IKKPPL    AP +  KYE++P+IINV+T  DF YIVQLLTGDPN PPP+YPCNC     + +P                 
Subjt:  YPGREGRKQVLQISKDSQTIKKPPL----APVIRYKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSP-----------------

Query:  -----PPNDFTP---------------------PPAL---PLYSLLNPPPLPPPS-----APNFKVPPSPFRTLNTEIPPRF--NSTPQFYPPN
              P DFTP                     PP L   P    ++P P PPPS      P F+V PS +    TEIPP F     P F+PPN
Subjt:  -----PPNDFTP---------------------PPAL---PLYSLLNPPPLPPPS-----APNFKVPPSPFRTLNTEIPPRF--NSTPQFYPPN

KAE8647157.1 hypothetical protein Csa_018820, partial [Cucumis sativus]3.5e-6099.15Show/hide
Query:  MSYPGREGRKQVLQISKDSQTIKKPPLAPVIRYKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSPPPNDFTPPPALPLYSLLNP
        MSYPGREGRKQVLQISKDSQTIKKPPLAPVIRYKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSPPPNDFTPPPALPLYSLLNP
Subjt:  MSYPGREGRKQVLQISKDSQTIKKPPLAPVIRYKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSPPPNDFTPPPALPLYSLLNP

Query:  PPLPPPSAPNFKVPPSPF
        P LPPPSAPNFKVPPSPF
Subjt:  PPLPPPSAPNFKVPPSPF

KAG6602166.1 hypothetical protein SDJN03_07399, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1041.5Show/hide
Query:  YPGREGRKQVLQISKDSQTIKKPPLAPVIR------YKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSPPPNDFTPPPALPLYS
        YP  +  +Q LQISK S++I KPPL P          KY++ PKII+VKT  +F YIVQLLTG PNHPPP            LSPPP    P P     S
Subjt:  YPGREGRKQVLQISKDSQTIKKPPLAPVIR------YKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSPPPNDFTPPPALPLYS

Query:  LLNPPPL----------PPPSAPNFKVPPSPFRTLNTEIPPRFNSTP
        +LNPPP             PS P   +PP+ F+ + +   P   S P
Subjt:  LLNPPPL----------PPPSAPNFKVPPSPFRTLNTEIPPRFNSTP

XP_022959600.1 extensin-like [Cucurbita moschata]2.8e-0941.84Show/hide
Query:  YPGREGRKQVLQISKDSQTIKKPPLAPVIR------YKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSPPPNDFTPPPALPLYS
        YP  +  +Q LQISK S++IKKPPL P          KY++ PKII+VKT  +F YIVQLLTG PNHPPP  P +       LSP      P P     S
Subjt:  YPGREGRKQVLQISKDSQTIKKPPLAPVIR------YKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSPPPNDFTPPPALPLYS

Query:  LLNPPPL----------PPPSAPNFKVPPSPFRTLNTEIPP
        +LNPPP             PS P   +PP+ F+ + +   P
Subjt:  LLNPPPL----------PPPSAPNFKVPPSPFRTLNTEIPP

XP_038885909.1 extensin-like [Benincasa hispida]4.3e-2643.6Show/hide
Query:  PGREGRKQVLQISKDSQTIKKPP--------LAPVIRYKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLH---------LSPPPNDF
        P  EGRK++ QIS +S+ IKKPP         AP    +YE +PKII V+T  DF YIVQLLTGDPN PPP YPC  +              LSP P   
Subjt:  PGREGRKQVLQISKDSQTIKKPP--------LAPVIRYKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLH---------LSPPPNDF

Query:  -------------TPPPALPL----------------------------------YSLLNPPPL---PPPSAPNFKVPPSPFRTLNTEIPPRFNS--TPQ
                     +PPP LPL                                    LL PPPL   P P APNF+VPPSPFRTLNTEIPP FN+   P 
Subjt:  -------------TPPPALPL----------------------------------YSLLNPPPL---PPPSAPNFKVPPSPFRTLNTEIPPRFNS--TPQ

Query:  FYPPNHFPPNN
        F+PPNHFP NN
Subjt:  FYPPNHFPPNN

TrEMBL top hitse value%identityAlignment
A0A0A0KCP3 Uncharacterized protein4.0e-7899.31Show/hide
Query:  MSYPGREGRKQVLQISKDSQTIKKPPLAPVIRYKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSPPPNDFTPPPALPLYSLLNP
        MSYPGREGRKQVLQISKDSQTIKKPPLAPVIRYKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSPPPNDFTPPPALPLYSLLNP
Subjt:  MSYPGREGRKQVLQISKDSQTIKKPPLAPVIRYKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSPPPNDFTPPPALPLYSLLNP

Query:  PPLPPPSAPNFKVPPSPFRTLNTEIPPRFNSTPQFYPPNHFPPNN
        P LPPPSAPNFKVPPSPFRTLNTEIPPRFNSTPQFYPPNHFPPNN
Subjt:  PPLPPPSAPNFKVPPSPFRTLNTEIPPRFNSTPQFYPPNHFPPNN

A0A5A7UXK4 Uncharacterized protein6.4e-2040.72Show/hide
Query:  YPGREGRKQVLQISKDSQTIKKPPL----APVIRYKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSP-----------------
        +P  EG K +LQIS +S+ IKKPPL    AP +  KYE++P+IINV+T  DF YIVQLLTGDPN PPP+YPCNC     + +P                 
Subjt:  YPGREGRKQVLQISKDSQTIKKPPL----APVIRYKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSP-----------------

Query:  -----PPNDFTP---------------------PPAL---PLYSLLNPPPLPPPS-----APNFKVPPSPFRTLNTEIPPRF--NSTPQFYPPN
              P DFTP                     PP L   P    ++P P PPPS      P F+V PS +    TEIPP F     P F+PPN
Subjt:  -----PPNDFTP---------------------PPAL---PLYSLLNPPPLPPPS-----APNFKVPPSPFRTLNTEIPPRF--NSTPQFYPPN

A0A6J1H6R4 extensin-like1.3e-0941.84Show/hide
Query:  YPGREGRKQVLQISKDSQTIKKPPLAPVIR------YKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSPPPNDFTPPPALPLYS
        YP  +  +Q LQISK S++IKKPPL P          KY++ PKII+VKT  +F YIVQLLTG PNHPPP  P +       LSP      P P     S
Subjt:  YPGREGRKQVLQISKDSQTIKKPPLAPVIR------YKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSPPPNDFTPPPALPLYS

Query:  LLNPPPL----------PPPSAPNFKVPPSPFRTLNTEIPP
        +LNPPP             PS P   +PP+ F+ + +   P
Subjt:  LLNPPPL----------PPPSAPNFKVPPSPFRTLNTEIPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATCCTGGGAGGGAAGGAAGAAAACAAGTACTTCAAATCTCTAAGGATTCCCAAACTATCAAGAAGCCGCCACTGGCACCCGTCATAAGATACAAGTACGAGAT
GGACCCGAAGATCATTAATGTAAAAACTTCCGTAGACTTCACCTACATCGTCCAACTCCTCACTGGCGACCCCAATCATCCCCCACCTATATACCCCTGTAATTGTCACC
AACGCCGCCTTCACCTCTCACCCCCTCCCAATGATTTTACTCCGCCCCCGGCATTACCCTTATACTCTCTTCTTAATCCTCCGCCGCTCCCCCCACCATCCGCTCCCAAC
TTCAAAGTTCCGCCGTCGCCATTTCGTACGCTGAATACGGAAATTCCGCCGCGTTTCAACAGTACTCCCCAGTTTTACCCACCCAATCATTTTCCTCCCAACAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTATCCTGGGAGGGAAGGAAGAAAACAAGTACTTCAAATCTCTAAGGATTCCCAAACTATCAAGAAGCCGCCACTGGCACCCGTCATAAGATACAAGTACGAGAT
GGACCCGAAGATCATTAATGTAAAAACTTCCGTAGACTTCACCTACATCGTCCAACTCCTCACTGGCGACCCCAATCATCCCCCACCTATATACCCCTGTAATTGTCACC
AACGCCGCCTTCACCTCTCACCCCCTCCCAATGATTTTACTCCGCCCCCGGCATTACCCTTATACTCTCTTCTTAATCCTCCGCCGCTCCCCCCACCATCCGCTCCCAAC
TTCAAAGTTCCGCCGTCGCCATTTCGTACGCTGAATACGGAAATTCCGCCGCGTTTCAACAGTACTCCCCAGTTTTACCCACCCAATCATTTTCCTCCCAACAATTAA
Protein sequenceShow/hide protein sequence
MSYPGREGRKQVLQISKDSQTIKKPPLAPVIRYKYEMDPKIINVKTSVDFTYIVQLLTGDPNHPPPIYPCNCHQRRLHLSPPPNDFTPPPALPLYSLLNPPPLPPPSAPN
FKVPPSPFRTLNTEIPPRFNSTPQFYPPNHFPPNN