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CSPI06G18030 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G18030
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDof zinc finger protein DOF3.5
Genome locationChr6:16364502..16364771
RNA-Seq ExpressionCSPI06G18030
SyntenyCSPI06G18030
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058912.1 dof zinc finger protein DOF3.5 [Cucumis melo var. makuwa]9.3e-4092.13Show/hide
Query:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF
        +LL+DENQREE KQGIPG++ENVSFGLETELGIDEEVWAS EMQEQVQELDSFSCNYYANDLRVSDQ CQVGDNWSSFDFAAVNNVEYF
Subjt:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF

KAE8647182.1 hypothetical protein Csa_018970 [Cucumis sativus]9.3e-4098.8Show/hide
Query:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAV
        MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAA+
Subjt:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAV

KAG6578910.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2568.54Show/hide
Query:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF
        +L+D+ENQ +E+KQGI G+YEN  FGL  ELG++EEVWAS    +Q+QELDSFSCNY AN      QFC+VGDNWSSFDFAAVNNVEYF
Subjt:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF

XP_004148826.2 dof zinc finger protein DOF1.2 [Cucumis sativus]6.2e-44100Show/hide
Query:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF
        MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF
Subjt:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF

XP_038886152.1 dof zinc finger protein DOF1.2-like [Benincasa hispida]7.6e-3480.9Show/hide
Query:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF
        +L D+ENQ +EEKQGIPG+YEN+ FGLETELGIDEE+W S ++QEQ+QELDSFS NY AN LRVSDQFCQVGDNWSSFDFAAVNNVEYF
Subjt:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF

TrEMBL top hitse value%identityAlignment
A0A0A0KGG2 Dof-type domain-containing protein3.0e-44100Show/hide
Query:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF
        MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF
Subjt:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF

A0A5A7USP7 Dof zinc finger protein DOF3.54.5e-4092.13Show/hide
Query:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF
        +LL+DENQREE KQGIPG++ENVSFGLETELGIDEEVWAS EMQEQVQELDSFSCNYYANDLRVSDQ CQVGDNWSSFDFAAVNNVEYF
Subjt:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF

A0A6J1FHI1 dof zinc finger protein DOF1.2-like3.1e-2567.42Show/hide
Query:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF
        +L ++ENQ +E+KQGI G+YEN  FGL  ELG++EEVWAS    +Q+QELDSFSCNY AN      QFC+VGDNWSSFDFAAVNNVEYF
Subjt:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF

A0A6J1JZV1 dof zinc finger protein DOF1.2-like3.1e-2566.29Show/hide
Query:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF
        +L+++ENQ +E+KQGI G+YEN  FGL  ELG++EE+WAS    +Q+QELDSFSCNY AN      QFC+VGDNWSSFDFAAVNNVEYF
Subjt:  MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTATTGGACGATGAAAATCAAAGGGAAGAAGAAAAACAGGGGATCCCGGGAAGTTACGAGAATGTTTCATTTGGGTTAGAAACAGAGTTGGGGATTGATGAAGAAGT
ATGGGCGTCACCAGAAATGCAAGAACAAGTTCAAGAATTGGACTCATTTTCTTGCAATTACTATGCGAATGACTTGCGGGTTTCTGATCAGTTCTGTCAAGTGGGAGATA
ACTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTATTGGACGATGAAAATCAAAGGGAAGAAGAAAAACAGGGGATCCCGGGAAGTTACGAGAATGTTTCATTTGGGTTAGAAACAGAGTTGGGGATTGATGAAGAAGT
ATGGGCGTCACCAGAAATGCAAGAACAAGTTCAAGAATTGGACTCATTTTCTTGCAATTACTATGCGAATGACTTGCGGGTTTCTGATCAGTTCTGTCAAGTGGGAGATA
ACTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTTTAA
Protein sequenceShow/hide protein sequence
MLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF