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CSPI06G18360 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G18360
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionF15O4.13
Genome locationChr6:16726446..16726604
RNA-Seq ExpressionCSPI06G18360
SyntenyCSPI06G18360
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033059.1 uncharacterized protein E6C27_scaffold269G001710 [Cucumis melo var. makuwa]2.3e-0662.5Show/hide
Query:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKV----RGRG
        MA+LQAIQGI+E++ ED++E+ AQ Q EE+ALQEDE ++DLVEQE +V    RGRG
Subjt:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKV----RGRG

KAA0047357.1 uncharacterized protein E6C27_scaffold754G00030 [Cucumis melo var. makuwa]4.2e-0872.55Show/hide
Query:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGR
        MAILQAIQG+M+ IR+DR+E+ AQQQREE+ LQEDE +IDLVEQE +V GR
Subjt:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGR

XP_016902063.1 PREDICTED: uncharacterized protein LOC107991521 [Cucumis melo]4.2e-0872.55Show/hide
Query:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGR
        MAILQAIQG+M+ IR+DR+E+ AQQQREE+ LQEDE +IDLVEQE +V GR
Subjt:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGR

XP_022158402.1 uncharacterized protein LOC111024891 [Momordica charantia]1.4e-0663.46Show/hide
Query:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGRG
        MAILQ+IQG++EM+REDR+E+  QQ+REE+ LQEDEG+ D   QE +V GRG
Subjt:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGRG

XP_038902315.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120088948 [Benincasa hispida]4.2e-0871.15Show/hide
Query:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGRG
        MAILQAIQG+MEM+REDR+E+ AQQQR     QEDEG+IDLVEQE ++RG+G
Subjt:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGRG

TrEMBL top hitse value%identityAlignment
A0A1S4E1G3 uncharacterized protein LOC1079915212.1e-0872.55Show/hide
Query:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGR
        MAILQAIQG+M+ IR+DR+E+ AQQQREE+ LQEDE +IDLVEQE +V GR
Subjt:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGR

A0A5A7TZH9 Retrotrans_gag domain-containing protein2.1e-0872.55Show/hide
Query:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGR
        MAILQAIQG+M+ IR+DR+E+ AQQQREE+ LQEDE +IDLVEQE +V GR
Subjt:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGR

A0A5A7UMH2 Putative gag protein1.5e-0661.54Show/hide
Query:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGRG
        +AILQAIQG++E++RE+R+E+ AQQQRE + LQEDEG+ DL   E ++RGRG
Subjt:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGRG

A0A5D3BUV3 Uncharacterized protein1.1e-0662.5Show/hide
Query:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKV----RGRG
        MA+LQAIQGI+E++ ED++E+ AQ Q EE+ALQEDE ++DLVEQE +V    RGRG
Subjt:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKV----RGRG

A0A6J1DX52 uncharacterized protein LOC1110248916.6e-0763.46Show/hide
Query:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGRG
        MAILQ+IQG++EM+REDR+E+  QQ+REE+ LQEDEG+ D   QE +V GRG
Subjt:  MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTCTTCAAGCCATTCAAGGAATTATGGAAATGATAAGGGAAGATAGGCGAGAGAAAATGGCACAACAGCAAAGAGAAGAACAAGCCTTGCAAGAAGATGAGGG
AATTATTGATTTAGTTGAACAAGAAAATAAAGTTAGAGGAAGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATTCTTCAAGCCATTCAAGGAATTATGGAAATGATAAGGGAAGATAGGCGAGAGAAAATGGCACAACAGCAAAGAGAAGAACAAGCCTTGCAAGAAGATGAGGG
AATTATTGATTTAGTTGAACAAGAAAATAAAGTTAGAGGAAGAGGATGA
Protein sequenceShow/hide protein sequence
MAILQAIQGIMEMIREDRREKMAQQQREEQALQEDEGIIDLVEQENKVRGRG