; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G18400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G18400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationChr6:16783954..16785839
RNA-Seq ExpressionCSPI06G18400
SyntenyCSPI06G18400
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.0e-9944.62Show/hide
Query:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD
        L  L  +CLP W++GGDFN++RW+ ETT K+ A   +  FNSFIS C+  DPP++NAKY WSNLR Q TLSRLDRFL+T  WEN F  H SK+L +TTSD
Subjt:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD

Query:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH
        H+PI LES+++ WGP+PFRFTN++L++  +K+NIE WW +T+Q G+ GYSF  RLKQL+  IK+W ++ K  N+  ++  +KE++ IDKLEAE + TE H
Subjt:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH

Query:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYTEKKRDLWFIDNLLWTP
           RT++K DL Q+ L EAQ+W QKCKR+W  E DENS+F+HKIC+ RQ++  IS I    G  C  D DI   FI HF +IYT+ +    FI+NL W P
Subjt:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYTEKKRDLWFIDNLLWTP

Query:  IKETEH---DDP-------VTIVAFQPR-----DGRLCGTCSNSRTSQPIKIQELW-----------TVSYKENGLLAK----STTNAWAGIQLLTS---
        I        D P       +T+ +F        DG        S +     I +++            V+     L+AK     T   +  I L T+   
Subjt:  IKETEH---DDP-------VTIVAFQPR-----DGRLCGTCSNSRTSQPIKIQELW-----------TVSYKENGLLAK----STTNAWAGIQLLTS---

Query:  --PSTGKAGILRSSASTLHGLENQLAFVRGRQITDVILIANEAVDF
            T    + ++   T+   E+Q+AFV+GRQIT+ ILIANEA+DF
Subjt:  --PSTGKAGILRSSASTLHGLENQLAFVRGRQITDVILIANEAVDF

TYJ99326.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.4e-9643.85Show/hide
Query:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD
        L  L  +C P W++GGDFN++RW+ ET+ K+ A   +  FN+FIS C+  DPP+ NAK+ WSNLR Q TLSRLDRFL++  WEN F  H SK+L +TTSD
Subjt:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD

Query:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH
        H+PI LES+S+ WGP+PFRFTN++L++  +K+NIE WW +T+Q G  GYSF  RLKQL+  IK+W +  K  ++  ++  +KE++ I+KLEAE   TE H
Subjt:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH

Query:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYTEKKRDLWFIDNLLWTP
           R ++K DL Q+ L EAQ+W QKCKR+W  E DENS+F+HKIC+ RQ++  IS I    G  C  D DI   FI HF EIYT+ +    FIDNL W P
Subjt:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYTEKKRDLWFIDNLLWTP

Query:  IKETEH---DDP-------VTIVAFQPR-----DG---------------RLCGTC----SNSRTSQPIKIQELWTVSYKENGLLAKSTTNAWAGIQLLT
        I  T     D P       +T+ +F        DG                +C       SN   ++ +    +  ++ KEN      T   +  I L T
Subjt:  IKETEH---DDP-------VTIVAFQPR-----DG---------------RLCGTC----SNSRTSQPIKIQELWTVSYKENGLLAKSTTNAWAGIQLLT

Query:  SPSTGKAGILRSS-ASTLHGL--ENQLAFVRGRQITDVILIANEAVD
        +     A +L      TL     E+Q+AFV+GRQIT+ ILIANEA+D
Subjt:  SPSTGKAGILRSS-ASTLHGL--ENQLAFVRGRQITDVILIANEAVD

TYK06777.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.7e-9444.52Show/hide
Query:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD
        L+ L   C P WL+ GDFN+VR+ SET+A++ + H +  FN FI+  +  DPP++NAK+ WSNLRV P LSR+DRFLYT +WEN F  H+SK L + TSD
Subjt:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD

Query:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH
        H+PI LES+ + WGP+PF+  N  L+E  FK NI +WWK+  QEGHPG+SF  +LKQLS  I++  +  K  +DE++   +KE++ ID+LEAE N++E  
Subjt:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH

Query:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYT-EKKRDLWFIDNLLWT
           RT +K D+     KEAQ+W QK KRLW  E DEN++F+HKICS RQRRS IS+I++A G  C+T+  I K F+DHF +IY    +   W IDNL W+
Subjt:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYT-EKKRDLWFIDNLLWT

Query:  PIKETEHDDPVTIVAFQPRDGRLCGTCSNSRTSQPIKIQEL-WTVSYKENGLLAKSTTNA----WAGIQLLTSPSTGKAGILR---SSASTLHGLENQLA
        PI   +    +    F   +     T  +S  S     Q +  T++     L+AK    A    +  I L TS     A ++             ENQ+A
Subjt:  PIKETEHDDPVTIVAFQPRDGRLCGTCSNSRTSQPIKIQEL-WTVSYKENGLLAKSTTNA----WAGIQLLTSPSTGKAGILR---SSASTLHGLENQLA

Query:  FVRGRQITDVILIANEAVDF
        FV+ RQI D IL+ANEA+D+
Subjt:  FVRGRQITDVILIANEAVDF

TYK24536.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.4e-9543.43Show/hide
Query:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD
        L+ L   C P WL+ GDFN VR+ SET+ ++ + H +  FN FIS  +  DPP++NAK+ WSNLRVQP LSR+DRFLYT +WEN F  H+SK L + TSD
Subjt:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD

Query:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH
        H+PIALES+ + WGP+PF+F N  L+E  FK+N+  WWK+  Q GHPG+SF  +LKQLS  I+   K  K  NDEE++  +KE++ ID+LEAE N +E  
Subjt:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH

Query:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYT-EKKRDLWFIDNLLWT
           RT +K D+     KEAQ+W QK KRLW  E DEN++F+HKICS RQRRS IS+I++  G  C+T+  I K F+DHF +IY    +   W IDNL W+
Subjt:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYT-EKKRDLWFIDNLLWT

Query:  PIKETEHDDPVTIVAFQPRDGRLCGTCSNS------------RTSQPIKIQELWTV--SYKENGLLAKSTTNAWAGIQLLTSPSTGKAGILRSSASTLHG
        PI  T+  +  ++   +     L    +N             +++  +  +E++ +   +  N ++ K+       I L+      K      +      
Subjt:  PIKETEHDDPVTIVAFQPRDGRLCGTCSNS------------RTSQPIKIQELWTV--SYKENGLLAKSTTNAWAGIQLLTSPSTGKAGILRSSASTLHG

Query:  LENQLAFVRGRQITDVILIANEAVDF
         ENQ+AFV+GRQI D IL+ANEA+D+
Subjt:  LENQLAFVRGRQITDVILIANEAVDF

TYK29577.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.5e-9843.47Show/hide
Query:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD
        L  L  +C P W++GGDFN++RW+ ET+ K+ A   +  FN+FIS C+  DPP+ NAK+ WSNLR Q TLSRLDRFL++  WEN F  H SK+L +TTSD
Subjt:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD

Query:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH
        H+PI LES+++ WGP+PFRFTN++L++  +K+NIE WW +T+Q G+ GYSF  RLKQL+  IK+W +  K  N+  ++  +KE++ IDKLEAE + TE H
Subjt:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH

Query:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYTEKKRDLWFIDNLLWTP
           R ++K DL Q+ L EAQ+W QKCKR+W  E DENS+F+HKIC+ RQ++  IS I    G  C  D DI   FI HF EIYT+ +    FIDNL W P
Subjt:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYTEKKRDLWFIDNLLWTP

Query:  IKETEH---DDP-------VTIVAFQPR-----DGRLCGTCSNSRTSQPIKIQELW-------TVSYKENGLL-----AKSTTNAWAGIQLLTSPSTGKA
        I  T     D P       +T+ +F        DG        S +     I +++       T++   N  L      K      A  + ++  +    
Subjt:  IKETEH---DDP-------VTIVAFQPR-----DGRLCGTCSNSRTSQPIKIQELW-------TVSYKENGLL-----AKSTTNAWAGIQLLTSPSTGKA

Query:  GILRSSASTLHGL------ENQLAFVRGRQITDVILIANEAVDF
         I ++ A  L         E+Q+AFV+GR+IT+ ILIANEA+DF
Subjt:  GILRSSASTLHGL------ENQLAFVRGRQITDVILIANEAVDF

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein4.8e-10044.62Show/hide
Query:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD
        L  L  +CLP W++GGDFN++RW+ ETT K+ A   +  FNSFIS C+  DPP++NAKY WSNLR Q TLSRLDRFL+T  WEN F  H SK+L +TTSD
Subjt:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD

Query:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH
        H+PI LES+++ WGP+PFRFTN++L++  +K+NIE WW +T+Q G+ GYSF  RLKQL+  IK+W ++ K  N+  ++  +KE++ IDKLEAE + TE H
Subjt:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH

Query:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYTEKKRDLWFIDNLLWTP
           RT++K DL Q+ L EAQ+W QKCKR+W  E DENS+F+HKIC+ RQ++  IS I    G  C  D DI   FI HF +IYT+ +    FI+NL W P
Subjt:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYTEKKRDLWFIDNLLWTP

Query:  IKETEH---DDP-------VTIVAFQPR-----DGRLCGTCSNSRTSQPIKIQELW-----------TVSYKENGLLAK----STTNAWAGIQLLTS---
        I        D P       +T+ +F        DG        S +     I +++            V+     L+AK     T   +  I L T+   
Subjt:  IKETEH---DDP-------VTIVAFQPR-----DGRLCGTCSNSRTSQPIKIQELW-----------TVSYKENGLLAK----STTNAWAGIQLLTS---

Query:  --PSTGKAGILRSSASTLHGLENQLAFVRGRQITDVILIANEAVDF
            T    + ++   T+   E+Q+AFV+GRQIT+ ILIANEA+DF
Subjt:  --PSTGKAGILRSSASTLHGLENQLAFVRGRQITDVILIANEAVDF

A0A5D3BJP3 LINE-1 retrotransposable element ORF2 protein6.6e-9743.85Show/hide
Query:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD
        L  L  +C P W++GGDFN++RW+ ET+ K+ A   +  FN+FIS C+  DPP+ NAK+ WSNLR Q TLSRLDRFL++  WEN F  H SK+L +TTSD
Subjt:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD

Query:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH
        H+PI LES+S+ WGP+PFRFTN++L++  +K+NIE WW +T+Q G  GYSF  RLKQL+  IK+W +  K  ++  ++  +KE++ I+KLEAE   TE H
Subjt:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH

Query:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYTEKKRDLWFIDNLLWTP
           R ++K DL Q+ L EAQ+W QKCKR+W  E DENS+F+HKIC+ RQ++  IS I    G  C  D DI   FI HF EIYT+ +    FIDNL W P
Subjt:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYTEKKRDLWFIDNLLWTP

Query:  IKETEH---DDP-------VTIVAFQPR-----DG---------------RLCGTC----SNSRTSQPIKIQELWTVSYKENGLLAKSTTNAWAGIQLLT
        I  T     D P       +T+ +F        DG                +C       SN   ++ +    +  ++ KEN      T   +  I L T
Subjt:  IKETEH---DDP-------VTIVAFQPR-----DG---------------RLCGTC----SNSRTSQPIKIQELWTVSYKENGLLAKSTTNAWAGIQLLT

Query:  SPSTGKAGILRSS-ASTLHGL--ENQLAFVRGRQITDVILIANEAVD
        +     A +L      TL     E+Q+AFV+GRQIT+ ILIANEA+D
Subjt:  SPSTGKAGILRSS-ASTLHGL--ENQLAFVRGRQITDVILIANEAVD

A0A5D3C4J1 LINE-1 retrotransposable element ORF2 protein1.8e-9444.52Show/hide
Query:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD
        L+ L   C P WL+ GDFN+VR+ SET+A++ + H +  FN FI+  +  DPP++NAK+ WSNLRV P LSR+DRFLYT +WEN F  H+SK L + TSD
Subjt:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD

Query:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH
        H+PI LES+ + WGP+PF+  N  L+E  FK NI +WWK+  QEGHPG+SF  +LKQLS  I++  +  K  +DE++   +KE++ ID+LEAE N++E  
Subjt:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH

Query:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYT-EKKRDLWFIDNLLWT
           RT +K D+     KEAQ+W QK KRLW  E DEN++F+HKICS RQRRS IS+I++A G  C+T+  I K F+DHF +IY    +   W IDNL W+
Subjt:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYT-EKKRDLWFIDNLLWT

Query:  PIKETEHDDPVTIVAFQPRDGRLCGTCSNSRTSQPIKIQEL-WTVSYKENGLLAKSTTNA----WAGIQLLTSPSTGKAGILR---SSASTLHGLENQLA
        PI   +    +    F   +     T  +S  S     Q +  T++     L+AK    A    +  I L TS     A ++             ENQ+A
Subjt:  PIKETEHDDPVTIVAFQPRDGRLCGTCSNSRTSQPIKIQEL-WTVSYKENGLLAKSTTNA----WAGIQLLTSPSTGKAGILR---SSASTLHGLENQLA

Query:  FVRGRQITDVILIANEAVDF
        FV+ RQI D IL+ANEA+D+
Subjt:  FVRGRQITDVILIANEAVDF

A0A5D3DLM2 LINE-1 retrotransposable element ORF2 protein2.1e-9543.43Show/hide
Query:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD
        L+ L   C P WL+ GDFN VR+ SET+ ++ + H +  FN FIS  +  DPP++NAK+ WSNLRVQP LSR+DRFLYT +WEN F  H+SK L + TSD
Subjt:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD

Query:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH
        H+PIALES+ + WGP+PF+F N  L+E  FK+N+  WWK+  Q GHPG+SF  +LKQLS  I+   K  K  NDEE++  +KE++ ID+LEAE N +E  
Subjt:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH

Query:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYT-EKKRDLWFIDNLLWT
           RT +K D+     KEAQ+W QK KRLW  E DEN++F+HKICS RQRRS IS+I++  G  C+T+  I K F+DHF +IY    +   W IDNL W+
Subjt:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYT-EKKRDLWFIDNLLWT

Query:  PIKETEHDDPVTIVAFQPRDGRLCGTCSNS------------RTSQPIKIQELWTV--SYKENGLLAKSTTNAWAGIQLLTSPSTGKAGILRSSASTLHG
        PI  T+  +  ++   +     L    +N             +++  +  +E++ +   +  N ++ K+       I L+      K      +      
Subjt:  PIKETEHDDPVTIVAFQPRDGRLCGTCSNS------------RTSQPIKIQELWTV--SYKENGLLAKSTTNAWAGIQLLTSPSTGKAGILRSSASTLHG

Query:  LENQLAFVRGRQITDVILIANEAVDF
         ENQ+AFV+GRQI D IL+ANEA+D+
Subjt:  LENQLAFVRGRQITDVILIANEAVDF

A0A5D3E0F6 LINE-1 retrotransposable element ORF2 protein1.2e-9843.47Show/hide
Query:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD
        L  L  +C P W++GGDFN++RW+ ET+ K+ A   +  FN+FIS C+  DPP+ NAK+ WSNLR Q TLSRLDRFL++  WEN F  H SK+L +TTSD
Subjt:  LMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLPQTTSD

Query:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH
        H+PI LES+++ WGP+PFRFTN++L++  +K+NIE WW +T+Q G+ GYSF  RLKQL+  IK+W +  K  N+  ++  +KE++ IDKLEAE + TE H
Subjt:  HYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFH

Query:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYTEKKRDLWFIDNLLWTP
           R ++K DL Q+ L EAQ+W QKCKR+W  E DENS+F+HKIC+ RQ++  IS I    G  C  D DI   FI HF EIYT+ +    FIDNL W P
Subjt:  ISCRTSIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYTEKKRDLWFIDNLLWTP

Query:  IKETEH---DDP-------VTIVAFQPR-----DGRLCGTCSNSRTSQPIKIQELW-------TVSYKENGLL-----AKSTTNAWAGIQLLTSPSTGKA
        I  T     D P       +T+ +F        DG        S +     I +++       T++   N  L      K      A  + ++  +    
Subjt:  IKETEH---DDP-------VTIVAFQPR-----DGRLCGTCSNSRTSQPIKIQELW-------TVSYKENGLL-----AKSTTNAWAGIQLLTSPSTGKA

Query:  GILRSSASTLHGL------ENQLAFVRGRQITDVILIANEAVDF
         I ++ A  L         E+Q+AFV+GR+IT+ ILIANEA+DF
Subjt:  GILRSSASTLHGL------ENQLAFVRGRQITDVILIANEAVDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCATCTAAACGTGACAATAAAGGAGATTTCTGGAAGGAGCTTGATGAGATTAAACCAACTTTGCCTTCCAAGATGGCTTATGGGAGGAGACTTTAATATTGTCAG
ATGGCAATCGGAAACTACAGCAAAAAGCATTGCTCCCCACTGTGTGACCAACTTCAATTCATTCATCTCGGGATGCGATTTTAATGATCCACCCATTGCAAATGCCAAAT
ATATTTGGTCAAATCTCAGAGTTCAACCTACCCTATCAAGGCTCGACAGGTTCCTATACACTCCTGATTGGGAGAACTTTTTCGAACCTCACTTCTCCAAGCTGCTTCCT
CAAACAACATCTGACCATTATCCCATTGCACTAGAGTCCAACAGTTTAAAATGGGGTCCCACCCCATTCAGATTCACAAACTCCTTTCTCAGAGAAGTATCTTTCAAACA
AAATATTGAGCATTGGTGGAAAAGCACGGCACAAGAAGGACACCCGGGTTATTCCTTTACATGGAGACTCAAGCAACTATCACGTACAATCAAAAGCTGGAGTAAAAATA
TAAAAGTAACAAATGATGAAGAAAGACAGACACTGATGAAAGAACTCGAGTGCATAGACAAACTGGAAGCAGAAAACAATATCACTGAATTTCACATCTCTTGCAGAACT
TCCATCAAAACGGACTTGAAACAAATGGCCCTGAAAGAAGCACAACTTTGGACCCAAAAATGCAAACGGTTATGGAACATGGAAAGTGACGAAAATTCAGCTTTTTATCA
TAAAATTTGCTCTGTTAGGCAAAGAAGAAGCTTCATATCAAGCATTTCCACTGCTCAAGGTGCTCTGTGTACAACTGATAGGGACATTAAGAAAACCTTCATCGATCATT
TTGGGGAAATCTATACGGAAAAGAAAAGAGATCTTTGGTTCATCGACAACCTCCTCTGGACTCCTATAAAAGAGACAGAGCATGATGACCCTGTCACAATCGTAGCGTTT
CAACCTCGAGACGGACGATTGTGCGGCACTTGTTCTAACTCACGAACAAGTCAGCCGATCAAAATCCAAGAGTTGTGGACTGTCAGTTACAAGGAAAATGGGTTGCTTGC
AAAGAGTACAACTAATGCTTGGGCGGGGATTCAACTGTTGACGTCCCCGTCGACTGGCAAAGCTGGAATCCTTCGATCTTCTGCCTCCACGCTTCACGGTCTTGAGAACC
AATTAGCTTTCGTCAGAGGGAGGCAGATTACGGATGTCATTTTGATTGCAAATGAAGCGGTGGATTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCATCTAAACGTGACAATAAAGGAGATTTCTGGAAGGAGCTTGATGAGATTAAACCAACTTTGCCTTCCAAGATGGCTTATGGGAGGAGACTTTAATATTGTCAG
ATGGCAATCGGAAACTACAGCAAAAAGCATTGCTCCCCACTGTGTGACCAACTTCAATTCATTCATCTCGGGATGCGATTTTAATGATCCACCCATTGCAAATGCCAAAT
ATATTTGGTCAAATCTCAGAGTTCAACCTACCCTATCAAGGCTCGACAGGTTCCTATACACTCCTGATTGGGAGAACTTTTTCGAACCTCACTTCTCCAAGCTGCTTCCT
CAAACAACATCTGACCATTATCCCATTGCACTAGAGTCCAACAGTTTAAAATGGGGTCCCACCCCATTCAGATTCACAAACTCCTTTCTCAGAGAAGTATCTTTCAAACA
AAATATTGAGCATTGGTGGAAAAGCACGGCACAAGAAGGACACCCGGGTTATTCCTTTACATGGAGACTCAAGCAACTATCACGTACAATCAAAAGCTGGAGTAAAAATA
TAAAAGTAACAAATGATGAAGAAAGACAGACACTGATGAAAGAACTCGAGTGCATAGACAAACTGGAAGCAGAAAACAATATCACTGAATTTCACATCTCTTGCAGAACT
TCCATCAAAACGGACTTGAAACAAATGGCCCTGAAAGAAGCACAACTTTGGACCCAAAAATGCAAACGGTTATGGAACATGGAAAGTGACGAAAATTCAGCTTTTTATCA
TAAAATTTGCTCTGTTAGGCAAAGAAGAAGCTTCATATCAAGCATTTCCACTGCTCAAGGTGCTCTGTGTACAACTGATAGGGACATTAAGAAAACCTTCATCGATCATT
TTGGGGAAATCTATACGGAAAAGAAAAGAGATCTTTGGTTCATCGACAACCTCCTCTGGACTCCTATAAAAGAGACAGAGCATGATGACCCTGTCACAATCGTAGCGTTT
CAACCTCGAGACGGACGATTGTGCGGCACTTGTTCTAACTCACGAACAAGTCAGCCGATCAAAATCCAAGAGTTGTGGACTGTCAGTTACAAGGAAAATGGGTTGCTTGC
AAAGAGTACAACTAATGCTTGGGCGGGGATTCAACTGTTGACGTCCCCGTCGACTGGCAAAGCTGGAATCCTTCGATCTTCTGCCTCCACGCTTCACGGTCTTGAGAACC
AATTAGCTTTCGTCAGAGGGAGGCAGATTACGGATGTCATTTTGATTGCAAATGAAGCGGTGGATTTCTAG
Protein sequenceShow/hide protein sequence
MGHLNVTIKEISGRSLMRLNQLCLPRWLMGGDFNIVRWQSETTAKSIAPHCVTNFNSFISGCDFNDPPIANAKYIWSNLRVQPTLSRLDRFLYTPDWENFFEPHFSKLLP
QTTSDHYPIALESNSLKWGPTPFRFTNSFLREVSFKQNIEHWWKSTAQEGHPGYSFTWRLKQLSRTIKSWSKNIKVTNDEERQTLMKELECIDKLEAENNITEFHISCRT
SIKTDLKQMALKEAQLWTQKCKRLWNMESDENSAFYHKICSVRQRRSFISSISTAQGALCTTDRDIKKTFIDHFGEIYTEKKRDLWFIDNLLWTPIKETEHDDPVTIVAF
QPRDGRLCGTCSNSRTSQPIKIQELWTVSYKENGLLAKSTTNAWAGIQLLTSPSTGKAGILRSSASTLHGLENQLAFVRGRQITDVILIANEAVDF