| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0039770.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 5.9e-111 | 40.6 | Show/hide |
Query: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
MDY+S LLN + +K IKGV G NLTHLLFA DILLF+EDDE +I N++N + LF+LASGL+INLNKSTISPIN+D RT +A++WG S FLPI
Subjt: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
Query: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
YLGVPLGGK + FW EK+ +K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N + ++L+ W+ + S
Subjt: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
Query: KGGLGINNIQSTNFALLSK-------------------------KGD-----------------------------------------------------
KGGLGI+ ++ TNFALL+K KGD
Subjt: KGGLGINNIQSTNFALLSK-------------------------KGD-----------------------------------------------------
Query: --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
SI +MWN D DL P++ LR + LW +K SL ++G D+ W LN+NG +TVAS+K Q+ + + NL
Subjt: --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
Query: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQII
WK++IPK+C FF PSWC++CK +EDR HLF CP +W+ + L + + LC + K KTKK +I
Subjt: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQII
Query: NQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
+ A+ LWNIW E N RIF +EK V +WEDI+A+ G WTSRSSLF NY SSI LNLNAF
Subjt: NQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
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| KAA0040037.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.5e-106 | 40.3 | Show/hide |
Query: GKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETTEKL
G NLTHLLFA DILLF+EDDE +I N++N + LF+LASGL+INLNKSTISPIN+D RT +A++WG S FLPI YLGVPLGGK + FW EK+
Subjt: GKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETTEKL
Query: QRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK----
+K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N + ++L+ W+ + SP +GGLGI+ ++ TNFALL+K
Subjt: QRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK----
Query: ---------------------KGD-------------------------------------------------------------------SIANMWNAE
KGD SI +MWN
Subjt: ---------------------KGD-------------------------------------------------------------------SIANMWNAE
Query: KADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNLWKSTIPKRCKFF-----------
D DL P++ LR + LW +K SL ++G D+ W LN+NG +TVAS+K A +Q + + NLWK++IPK+C FF
Subjt: KADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNLWKSTIPKRCKFF-----------
Query: --------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQIINQHLVATTLWNIWNENNRRIFKE
PSWC++CK +EDR HLF CP +W+ + L + + LC + K KTKK +I + A+ LWNIW E N RIF
Subjt: --------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQIINQHLVATTLWNIWNENNRRIFKE
Query: EEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
+EK V +WEDI+A+ G WTSRSSLF NY SSI LNLNAF
Subjt: EEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
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| KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.6e-103 | 38.23 | Show/hide |
Query: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
MDYLS LL +L +K I GV+F NLTH+LFA DIL+F+ED E+ ++N++ L LFE ASGLNINL+KSTI PIN+ T R N + WG S LP
Subjt: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
Query: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
YLG+PLGGKP+ +FW +K+Q+K+++WKY+ LSKGG+ITLI +TL S P Y + VFK PK + + I+ WRNFLW T + NI+LI+W+ ++SP
Subjt: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
Query: KGGLGINNIQSTNFALLSK---------------------------------------------------------------------------------
KGGLGI+++ STNFALL K
Subjt: KGGLGINNIQSTNFALLSK---------------------------------------------------------------------------------
Query: -----------KGDSIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASLP-PLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
K S+ ++WN D +++ +PLR ++ LW +KASLP PLPD G W LN+N F ASIK + TN +Y L
Subjt: -----------KGDSIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASLP-PLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
Query: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNST-ALCKDLFKTKGKTKKQI
WK PK+CKFF P+WC +C ++ED HLF HCP++ LW K + +L K PN +L +++ KT+K +
Subjt: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNST-ALCKDLFKTKGKTKKQI
Query: INQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
I + +A LW IW E N RIFK+++K+ +WEDI A TG W+ +S LF NY SI LN++AF
Subjt: INQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
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| TYK06777.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 4.5e-111 | 40.6 | Show/hide |
Query: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
MDY+S LLN + +K IKGV G NLTHLLFA DILLF+EDDE +I N++N + LF+LASGL+INLNKSTISPIN+D RT +A++WG S FLPI
Subjt: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
Query: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
YLGVPLGGK + FW EK+ +K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N + ++L+ W+ + S
Subjt: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
Query: KGGLGINNIQSTNFALLSK-------------------------KGD-----------------------------------------------------
KGGLGI+ ++ TNFALL+K KGD
Subjt: KGGLGINNIQSTNFALLSK-------------------------KGD-----------------------------------------------------
Query: --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
SI +MWN D DL P++ LR + LW +K S+ ++G D+ W LN+NG +TVAS+K A Q + + NL
Subjt: --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
Query: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQII
WK++IPK+C FF PSWC++CK +EDR HLF CP +W+ + L + + LC + K KTKK +I
Subjt: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQII
Query: NQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
+ A+ LWNIW E N RIF +EK V +WEDI+A+ G WTSRSSLF NY SSI LNLNAF
Subjt: NQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
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| XP_016902461.1 PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo] | 7.7e-111 | 40.6 | Show/hide |
Query: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
MDY+S LLN + +K IKGV G NLTHLLFA DILLF+EDDE +I N++N + LF+LASGL+INLNKSTISPIN+D RT +A++WG S FLPI
Subjt: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
Query: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
YLGVPLGGK + FW EK+ +K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N + ++L+ W+ + S
Subjt: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
Query: KGGLGINNIQSTNFALLSK-------------------------KGD-----------------------------------------------------
KGGLGI+ ++ TNFALL+K KGD
Subjt: KGGLGINNIQSTNFALLSK-------------------------KGD-----------------------------------------------------
Query: --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
SI +MWN D DL P++ LR + LW +K SL ++G D+ W LN+NG +TVAS+K Q+ + + NL
Subjt: --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
Query: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQII
WK++IPK+C FF PSWC++CK +EDR HLF CP +W+ + L + + LC + K KTKK +I
Subjt: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQII
Query: NQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
+ A+ LWNIW E N RIF +EK V +WEDI+A+ G WTSRSSLF NY SSI LNLNAF
Subjt: NQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E2K5 LINE-1 retrotransposable element ORF2 protein | 3.7e-111 | 40.6 | Show/hide |
Query: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
MDY+S LLN + +K IKGV G NLTHLLFA DILLF+EDDE +I N++N + LF+LASGL+INLNKSTISPIN+D RT +A++WG S FLPI
Subjt: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
Query: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
YLGVPLGGK + FW EK+ +K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N + ++L+ W+ + S
Subjt: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
Query: KGGLGINNIQSTNFALLSK-------------------------KGD-----------------------------------------------------
KGGLGI+ ++ TNFALL+K KGD
Subjt: KGGLGINNIQSTNFALLSK-------------------------KGD-----------------------------------------------------
Query: --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
SI +MWN D DL P++ LR + LW +K SL ++G D+ W LN+NG +TVAS+K Q+ + + NL
Subjt: --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
Query: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQII
WK++IPK+C FF PSWC++CK +EDR HLF CP +W+ + L + + LC + K KTKK +I
Subjt: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQII
Query: NQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
+ A+ LWNIW E N RIF +EK V +WEDI+A+ G WTSRSSLF NY SSI LNLNAF
Subjt: NQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
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| A0A5A7TES3 LINE-1 retrotransposable element ORF2 protein | 7.3e-107 | 40.3 | Show/hide |
Query: GKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETTEKL
G NLTHLLFA DILLF+EDDE +I N++N + LF+LASGL+INLNKSTISPIN+D RT +A++WG S FLPI YLGVPLGGK + FW EK+
Subjt: GKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETTEKL
Query: QRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK----
+K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N + ++L+ W+ + SP +GGLGI+ ++ TNFALL+K
Subjt: QRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK----
Query: ---------------------KGD-------------------------------------------------------------------SIANMWNAE
KGD SI +MWN
Subjt: ---------------------KGD-------------------------------------------------------------------SIANMWNAE
Query: KADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNLWKSTIPKRCKFF-----------
D DL P++ LR + LW +K SL ++G D+ W LN+NG +TVAS+K A +Q + + NLWK++IPK+C FF
Subjt: KADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNLWKSTIPKRCKFF-----------
Query: --------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQIINQHLVATTLWNIWNENNRRIFKE
PSWC++CK +EDR HLF CP +W+ + L + + LC + K KTKK +I + A+ LWNIW E N RIF
Subjt: --------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQIINQHLVATTLWNIWNENNRRIFKE
Query: EEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
+EK V +WEDI+A+ G WTSRSSLF NY SSI LNLNAF
Subjt: EEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
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| A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein | 7.6e-104 | 38.23 | Show/hide |
Query: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
MDYLS LL +L +K I GV+F NLTH+LFA DIL+F+ED E+ ++N++ L LFE ASGLNINL+KSTI PIN+ T R N + WG S LP
Subjt: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
Query: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
YLG+PLGGKP+ +FW +K+Q+K+++WKY+ LSKGG+ITLI +TL S P Y + VFK PK + + I+ WRNFLW T + NI+LI+W+ ++SP
Subjt: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
Query: KGGLGINNIQSTNFALLSK---------------------------------------------------------------------------------
KGGLGI+++ STNFALL K
Subjt: KGGLGINNIQSTNFALLSK---------------------------------------------------------------------------------
Query: -----------KGDSIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASLP-PLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
K S+ ++WN D +++ +PLR ++ LW +KASLP PLPD G W LN+N F ASIK + TN +Y L
Subjt: -----------KGDSIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASLP-PLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
Query: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNST-ALCKDLFKTKGKTKKQI
WK PK+CKFF P+WC +C ++ED HLF HCP++ LW K + +L K PN +L +++ KT+K +
Subjt: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNST-ALCKDLFKTKGKTKKQI
Query: INQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
I + +A LW IW E N RIFK+++K+ +WEDI A TG W+ +S LF NY SI LN++AF
Subjt: INQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
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| A0A5D3C4J1 LINE-1 retrotransposable element ORF2 protein | 2.2e-111 | 40.6 | Show/hide |
Query: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
MDY+S LLN + +K IKGV G NLTHLLFA DILLF+EDDE +I N++N + LF+LASGL+INLNKSTISPIN+D RT +A++WG S FLPI
Subjt: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
Query: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
YLGVPLGGK + FW EK+ +K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N + ++L+ W+ + S
Subjt: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
Query: KGGLGINNIQSTNFALLSK-------------------------KGD-----------------------------------------------------
KGGLGI+ ++ TNFALL+K KGD
Subjt: KGGLGINNIQSTNFALLSK-------------------------KGD-----------------------------------------------------
Query: --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
SI +MWN D DL P++ LR + LW +K S+ ++G D+ W LN+NG +TVAS+K A Q + + NL
Subjt: --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
Query: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQII
WK++IPK+C FF PSWC++CK +EDR HLF CP +W+ + L + + LC + K KTKK +I
Subjt: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQII
Query: NQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
+ A+ LWNIW E N RIF +EK V +WEDI+A+ G WTSRSSLF NY SSI LNLNAF
Subjt: NQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
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| A0A5D3DM72 LINE-1 retrotransposable element ORF2 protein | 2.9e-111 | 40.6 | Show/hide |
Query: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
MDY+S LLN + +K IKGV G NLTHLLFA DILLF+EDDE +I N++N + LF+LASGL+INLNKSTISPIN+D RT +A++WG S FLPI
Subjt: MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQ
Query: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
YLGVPLGGK + FW EK+ +K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N + ++L+ W+ + S
Subjt: YLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPIN
Query: KGGLGINNIQSTNFALLSK-------------------------KGD-----------------------------------------------------
KGGLGI+ ++ TNFALL+K KGD
Subjt: KGGLGINNIQSTNFALLSK-------------------------KGD-----------------------------------------------------
Query: --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
SI +MWN D DL P++ LR + LW +K SL ++G D+ W LN+NG +TVAS+K Q+ + + NL
Subjt: --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNL
Query: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQII
WK++IPK+C FF PSWC++CK +EDR HLF CP +W+ + L + + LC + K KTKK +I
Subjt: WKSTIPKRCKFF-------------------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQII
Query: NQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
+ A+ LWNIW E N RIF +EK V +WEDI+A+ G WTSRSSLF NY SSI LNLNAF
Subjt: NQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAITGFWTSRSSLFKNYSTSSIPLNLNAF
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| SwissProt top hits | e value | %identity | Alignment |
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| O00370 LINE-1 retrotransposable element ORF2 protein | 2.6e-08 | 23.79 | Show/hide |
Query: LSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLG
L +L + ++ IKG+ GK + LFA D+++++E+ + N+ + F SG IN+ KS N + Q + + + F++ I+YLG
Subjt: LSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLG
Query: VPLGGKPNPRHFWSETTEKLQRKI----NNWKYASLSKGGKITLIKATLAS--FPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLS
+ L + + + E + L ++I N WK S G+I ++K + ++ + K P + +++ F+W ++K + K ++LS
Subjt: VPLGGKPNPRHFWSETTEKLQRKI----NNWKYASLSKGGKITLIKATLAS--FPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLS
Query: PINKGG
NK G
Subjt: PINKGG
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| P0C2F6 Putative ribonuclease H protein At1g65750 | 7.0e-14 | 35.85 | Show/hide |
Query: WSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFA
+ E E++ +++ W+ +LS G++TL KA L+S P + + P+ + + + R FLW +T +KK +L+KWS + SP +GGLG+ +S N A
Subjt: WSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFA
Query: LLSKKG
L+SK G
Subjt: LLSKKG
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| P11369 LINE-1 retrotransposable element ORF2 protein | 7.0e-06 | 21.35 | Show/hide |
Query: LSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLG
L +L + ++ IKG+ GK + L A D+++++ D + + + N + F G IN NKS + Q + FS+ I+YLG
Subjt: LSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLG
Query: VPLGGKPNPRH--FWSETTEKLQRKINNWKYASLSKGGKITLIKATL--ASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIK
V L + + + ++++ + WK S G+I ++K + + ++ + K P + +++ F+W N + +L+K
Subjt: VPLGGKPNPRH--FWSETTEKLQRKINNWKYASLSKGGKITLIKATL--ASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIK
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G45063.1 copper ion binding;electron carriers | 3.6e-05 | 30.59 | Show/hide |
Query: PSWCILCKAAEEDRQHLFAHCPFTTLLWKKV--EVILGKPLLFPNSTALCKDLFKTKGKTKKQIINQHLVATTLWNIWNENNRRI
PS C+LC A +E RQH+F CPF+ +W + P +F +S + + K K I + ++++IW E N R+
Subjt: PSWCILCKAAEEDRQHLFAHCPFTTLLWKKV--EVILGKPLLFPNSTALCKDLFKTKGKTKKQIINQHLVATTLWNIWNENNRRI
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| AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | 4.7e-13 | 28.87 | Show/hide |
Query: FSVNFLPIQYLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIK
F+ LP++YLG+PL K + EK++ +I W LS G++ LI + + S N+ + F+ P K+I +I +FLW +
Subjt: FSVNFLPIQYLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIK
Query: WSTMLSPINKGGLGINNIQSTN-FALLSKKGDSIANMWNAEK
WS + +P ++GGLGI +++ N + S G++ W +K
Subjt: WSTMLSPINKGGLGINNIQSTN-FALLSKKGDSIANMWNAEK
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| AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | 1.6e-05 | 26.47 | Show/hide |
Query: PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKK-QIINQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQ
P+ C+LC A ++ R HLF C F+ ++W+ L P C + + + K +I + + ++ IW E N+R+ + +S+ +DIQ
Subjt: PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKK-QIINQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQ
Query: AI
I
Subjt: AI
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| AT4G29090.1 Ribonuclease H-like superfamily protein | 2.7e-05 | 23.94 | Show/hide |
Query: SFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK-------KGDSI------------ANMWNA
+ P Y + F PK V K I ++ +F WRN + K ++ W + +GG+G +I++ N ALL K + +S+ ++ NA
Subjt: SFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK-------KGDSI------------ANMWNA
Query: EKADRDLYPQKPLRSVKEVLWEYMKASLPPLPDSGVDNHRWI
R + K + + +E+L + +A + D + H+W+
Subjt: EKADRDLYPQKPLRSVKEVLWEYMKASLPPLPDSGVDNHRWI
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