; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G18450 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G18450
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionincreased DNA methylation 3-like
Genome locationChr6:16809427..16810020
RNA-Seq ExpressionCSPI06G18450
SyntenyCSPI06G18450
Gene Ontology termsGO:1901537 - positive regulation of DNA demethylation (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR039321 - Increased DNA methylation 2/3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144249.1 increased DNA methylation 3 [Cucumis sativus]2.2e-75100Show/hide
Query:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT
        MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV

XP_008464810.1 PREDICTED: increased DNA methylation 3 isoform X1 [Cucumis melo]3.0e-7296Show/hide
Query:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRS----KVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPP
        MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDR+    KVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPP
Subjt:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRS----KVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPP

Query:  GPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV
        GPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPL V
Subjt:  GPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV

XP_008464812.1 PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo]2.5e-7499.32Show/hide
Query:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT
        MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPL V
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV

XP_022951227.1 increased DNA methylation 3-like [Cucurbita moschata]1.1e-6691.61Show/hide
Query:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT
        MEG+GD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+V IEGVM+GPG LK+SSAMYQMKVQQLCPPG FT
Subjt:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPP
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PP
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPP

XP_038884247.1 increased DNA methylation 3 [Benincasa hispida]1.4e-6994.44Show/hide
Query:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT
        MEG+GDQT+ KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVM+GPG LKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPL
        VSFKLPGPVDPRLS PSFRPDGILEVVVMKSRA PTVADS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPL

TrEMBL top hitse value%identityAlignment
A0A0A0KDF2 SHSP domain-containing protein1.1e-75100Show/hide
Query:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT
        MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV

A0A1S3CMB7 increased DNA methylation 3 isoform X11.5e-7296Show/hide
Query:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRS----KVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPP
        MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDR+    KVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPP
Subjt:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRS----KVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPP

Query:  GPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV
        GPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPL V
Subjt:  GPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV

A0A1S3CMV5 increased DNA methylation 3 isoform X21.2e-7499.32Show/hide
Query:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT
        MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPL V
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV

A0A5D3CM92 Increased DNA methylation 3 isoform X21.2e-7499.32Show/hide
Query:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT
        MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPL V
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV

A0A6J1GI33 increased DNA methylation 3-like5.4e-6791.61Show/hide
Query:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT
        MEG+GD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+V IEGVM+GPG LK+SSAMYQMKVQQLCPPG FT
Subjt:  MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPP
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PP
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPP

SwissProt top hitse value%identityAlignment
Q84K79 Alpha-crystallin domain-containing protein 22.31.8e-2247.11Show/hide
Query:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEG-VMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV
        K  V LTG+A  G  G  IGLVDI  SE +Y FRVALPGV +D  +   EI+ DGK+ I+G   +G   + + + +++M  Q LCPPG FT++F+LPGPV
Subjt:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEG-VMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV

Query:  DPRLSSPSFRPDGILEVVVMK
             + +F  DG+LE VV K
Subjt:  DPRLSSPSFRPDGILEVVVMK

Q8RWL4 Increased DNA methylation 21.0e-2244.12Show/hide
Query:  GNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGV-MSGPGFLKESSAMYQMKVQQLCPPGPFTV
        G       KP V       E   G  +GL+DIG  + AYLFRV+LPGV++D      E++ +GKV + GV  +G   +K  S +++M+ + LCPPG F+V
Subjt:  GNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGV-MSGPGFLKESSAMYQMKVQQLCPPGPFTV

Query:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTV
        SF+LPGPV P   S +F  DGILE VVMK+  + TV
Subjt:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTV

Q9SYQ0 Increased DNA methylation 37.9e-3152.85Show/hide
Query:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEG-VMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV
        +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +   EI+SDGKV +EG    G   +K  S +++M +++LCPPGPF + F LPGPV
Subjt:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEG-VMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV

Query:  DPRLSSPSFRPDGILEVVVMKSR
        DPRL SP+FR DGI E V+++ +
Subjt:  DPRLSSPSFRPDGILEVVVMKSR

Arabidopsis top hitse value%identityAlignment
AT1G20870.1 HSP20-like chaperones superfamily protein5.6e-3252.85Show/hide
Query:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEG-VMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV
        +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +   EI+SDGKV +EG    G   +K  S +++M +++LCPPGPF + F LPGPV
Subjt:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEG-VMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV

Query:  DPRLSSPSFRPDGILEVVVMKSR
        DPRL SP+FR DGI E V+++ +
Subjt:  DPRLSSPSFRPDGILEVVVMKSR

AT1G54840.1 HSP20-like chaperones superfamily protein7.3e-2444.12Show/hide
Query:  GNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGV-MSGPGFLKESSAMYQMKVQQLCPPGPFTV
        G       KP V       E   G  +GL+DIG  + AYLFRV+LPGV++D      E++ +GKV + GV  +G   +K  S +++M+ + LCPPG F+V
Subjt:  GNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGV-MSGPGFLKESSAMYQMKVQQLCPPGPFTV

Query:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTV
        SF+LPGPV P   S +F  DGILE VVMK+  + TV
Subjt:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTV

AT1G76440.1 HSP20-like chaperones superfamily protein3.4e-3761.54Show/hide
Query:  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRL
        V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +G+V I+GV+       ++  +Y+M+VQQLCPPGPF+++F LPG VDPRL
Subjt:  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRL

Query:  SSPSFRPDGILEVVVMK
         SP+FR DGI EVVV+K
Subjt:  SSPSFRPDGILEVVVMK

AT1G76440.2 HSP20-like chaperones superfamily protein3.4e-3761.54Show/hide
Query:  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRL
        V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +G+V I+GV+       ++  +Y+M+VQQLCPPGPF+++F LPG VDPRL
Subjt:  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRL

Query:  SSPSFRPDGILEVVVMK
         SP+FR DGI EVVV+K
Subjt:  SSPSFRPDGILEVVVMK

AT1G76440.3 HSP20-like chaperones superfamily protein3.4e-3761.54Show/hide
Query:  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRL
        V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +G+V I+GV+       ++  +Y+M+VQQLCPPGPF+++F LPG VDPRL
Subjt:  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRL

Query:  SSPSFRPDGILEVVVMK
         SP+FR DGI EVVV+K
Subjt:  SSPSFRPDGILEVVVMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCAATGGTGATCAGACGATGCTGAAGCCATCAGTTATTTTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAG
TGAAGGTGCATACCTCTTTCGTGTTGCATTGCCTGGCGTGCGAAAAGATCGAAGTAAGGTAAAATTTGAGATCAAAAGCGATGGTAAGGTTCAGATCGAAGGAGTGATGT
CAGGTCCAGGTTTCTTAAAAGAATCATCAGCTATGTACCAGATGAAAGTCCAGCAACTTTGTCCACCAGGACCTTTTACGGTTTCTTTTAAGCTGCCTGGTCCGGTTGAT
CCACGGTTGTCTTCGCCTAGTTTCCGGCCTGATGGCATTTTGGAAGTGGTGGTTATGAAGTCCAGAGCACAACCTACAGTGGCTGATTCCCAACCACCACTGGGAGTATA
A
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGCAATGGTGATCAGACGATGCTGAAGCCATCAGTTATTTTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAG
TGAAGGTGCATACCTCTTTCGTGTTGCATTGCCTGGCGTGCGAAAAGATCGAAGTAAGGTAAAATTTGAGATCAAAAGCGATGGTAAGGTTCAGATCGAAGGAGTGATGT
CAGGTCCAGGTTTCTTAAAAGAATCATCAGCTATGTACCAGATGAAAGTCCAGCAACTTTGTCCACCAGGACCTTTTACGGTTTCTTTTAAGCTGCCTGGTCCGGTTGAT
CCACGGTTGTCTTCGCCTAGTTTCCGGCCTGATGGCATTTTGGAAGTGGTGGTTATGAAGTCCAGAGCACAACCTACAGTGGCTGATTCCCAACCACCACTGGGAGTATA
A
Protein sequenceShow/hide protein sequence
MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVD
PRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV