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CSPI06G18540 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G18540
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionSignal recognition particle 54 kDa protein 2
Genome locationChr6:16860199..16860432
RNA-Seq ExpressionCSPI06G18540
SyntenyCSPI06G18540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]9.3e-0440.62Show/hide
Query:  MSVCLSSNQLFNGWLSSTYSPSSSQGRGHFWQELRVVIGICQGPWCLCGDFSVAR-CWKRNWGR
        ++ CLS   LF  W+S  Y PS+++    FWQEL  +  +C+  W L GDF+V R  W+++ GR
Subjt:  MSVCLSSNQLFNGWLSSTYSPSSSQGRGHFWQELRVVIGICQGPWCLCGDFSVAR-CWKRNWGR

TrEMBL top hitse value%identityAlignment
A0A6J1E2G6 uncharacterized protein LOC1110254054.5e-0440.62Show/hide
Query:  MSVCLSSNQLFNGWLSSTYSPSSSQGRGHFWQELRVVIGICQGPWCLCGDFSVAR-CWKRNWGR
        ++ CLS   LF  W+S  Y PS+++    FWQEL  +  +C+  W L GDF+V R  W+++ GR
Subjt:  MSVCLSSNQLFNGWLSSTYSPSSSQGRGHFWQELRVVIGICQGPWCLCGDFSVAR-CWKRNWGR

A0A6P5T1U8 uncharacterized protein LOC1107621455.9e-0447.62Show/hide
Query:  WLSSTYSPSSSQGRGHFWQELRVVIGICQGPWCLCGDFSVAR
        WLS  Y P   + RG FW EL  + G+C   WC+ GDF+V R
Subjt:  WLSSTYSPSSSQGRGHFWQELRVVIGICQGPWCLCGDFSVAR

M5VS59 Reverse transcriptase domain-containing protein (Fragment)7.7e-0440.91Show/hide
Query:  MSVCLSSNQLFNGWLSSTYSPSSSQGRGHFWQELRVVIGICQGPWCLCGDFSVAR--CWKRNWGRV
        +S+ +  N   + WLS  Y P   + R  FW+EL  + G C   WCL GDF+V R    K N GRV
Subjt:  MSVCLSSNQLFNGWLSSTYSPSSSQGRGHFWQELRVVIGICQGPWCLCGDFSVAR--CWKRNWGRV

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)7.7e-0440.91Show/hide
Query:  MSVCLSSNQLFNGWLSSTYSPSSSQGRGHFWQELRVVIGICQGPWCLCGDFSVAR--CWKRNWGRV
        +S+ +  N   + WLS  Y P   + R  FW+EL  + G C   WCL GDF+V R    K N GRV
Subjt:  MSVCLSSNQLFNGWLSSTYSPSSSQGRGHFWQELRVVIGICQGPWCLCGDFSVAR--CWKRNWGRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTCTGCTTGAGTTCTAATCAATTGTTTAACGGGTGGTTATCTAGCACCTACAGCCCCTCTTCCAGTCAAGGGAGAGGTCACTTCTGGCAAGAACTTAGAGTTGT
TATTGGGATATGTCAGGGACCGTGGTGTCTATGTGGTGATTTTAGTGTTGCTAGATGCTGGAAGAGAAATTGGGGGAGGGTGAAGCACGAAGAGTATGAAGAAGTTAAAT
ACTTCAATTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTCTGCTTGAGTTCTAATCAATTGTTTAACGGGTGGTTATCTAGCACCTACAGCCCCTCTTCCAGTCAAGGGAGAGGTCACTTCTGGCAAGAACTTAGAGTTGT
TATTGGGATATGTCAGGGACCGTGGTGTCTATGTGGTGATTTTAGTGTTGCTAGATGCTGGAAGAGAAATTGGGGGAGGGTGAAGCACGAAGAGTATGAAGAAGTTAAAT
ACTTCAATTCTTAA
Protein sequenceShow/hide protein sequence
MSVCLSSNQLFNGWLSSTYSPSSSQGRGHFWQELRVVIGICQGPWCLCGDFSVARCWKRNWGRVKHEEYEEVKYFNS