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CSPI06G18680 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G18680
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Genome locationChr6:16962905..16966875
RNA-Seq ExpressionCSPI06G18680
SyntenyCSPI06G18680
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006406 - mRNA export from nucleus (biological process)
GO:0043248 - proteasome assembly (biological process)
GO:0008541 - proteasome regulatory particle, lid subcomplex (cellular component)
InterPro domainsIPR007834 - DSS1/SEM1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599102.1 Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2794.44Show/hide
Query:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATE KAA+EEVKVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELE+NAEKK
Subjt:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

XP_004144232.1 protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus]1.6e-29100Show/hide
Query:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
Subjt:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

XP_022999790.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima]6.6e-2894.44Show/hide
Query:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATE+KAA+EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELE+N EKK
Subjt:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

XP_023546762.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X2 [Cucurbita pepo subsp. pepo]5.1e-2895.83Show/hide
Query:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATELKAA+EEVKVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELE+NAEKK
Subjt:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

XP_038884052.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like [Benincasa hispida]8.7e-2894.74Show/hide
Query:  MATELKAASEEVKVDLFEDDDEFEEFEINE----EWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATELKAASEEVKVDLFEDDDEFEEFEINE    EWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
Subjt:  MATELKAASEEVKVDLFEDDDEFEEFEINE----EWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

TrEMBL top hitse value%identityAlignment
A0A0A0KIG9 Uncharacterized protein7.7e-30100Show/hide
Query:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
Subjt:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

A0A1S3CMK4 protein DSS1 HOMOLOG ON CHROMOSOME V-like7.7e-30100Show/hide
Query:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
Subjt:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

A0A6J1DJN7 protein DSS1 HOMOLOG ON CHROMOSOME V-like1.6e-2791.67Show/hide
Query:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATELKA +EE+KVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELENN EKK
Subjt:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

A0A6J1KGK6 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like3.2e-2894.44Show/hide
Query:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATE+KAA+EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELE+N EKK
Subjt:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

A0A6J1KMT1 protein DSS1 HOMOLOG ON CHROMOSOME V-like2.7e-2793.06Show/hide
Query:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATE KA +EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELE+NAE+K
Subjt:  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

SwissProt top hitse value%identityAlignment
P60896 26S proteasome complex subunit SEM14.4e-0650Show/hide
Query:  EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK
        + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QL+ ELE +  K
Subjt:  EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK

P60897 26S proteasome complex subunit SEM14.4e-0650Show/hide
Query:  EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK
        + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QL+ ELE +  K
Subjt:  EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK

Q3ZBR6 26S proteasome complex subunit SEM14.4e-0650Show/hide
Query:  EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK
        + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QL+ ELE +  K
Subjt:  EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK

Q9FL96 Protein DSS1 HOMOLOG ON CHROMOSOME V2.8e-2176.71Show/hide
Query:  MATELKAASEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MA E KAA E VKVDLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS QLK+ELEN +EKK
Subjt:  MATELKAASEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

Q9XIR8 Protein DELETION OF SUV3 SUPPRESSOR 1(I)8.2e-2174.32Show/hide
Query:  MATELKAASEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MA E KAA+ E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS QL++ELEN  +KK
Subjt:  MATELKAASEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

Arabidopsis top hitse value%identityAlignment
AT1G64750.1 deletion of SUV3 suppressor 1(I)5.8e-2274.32Show/hide
Query:  MATELKAASEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MA E KAA+ E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS QL++ELEN  +KK
Subjt:  MATELKAASEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

AT1G64750.2 deletion of SUV3 suppressor 1(I)5.8e-2274.32Show/hide
Query:  MATELKAASEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MA E KAA+ E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS QL++ELEN  +KK
Subjt:  MATELKAASEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

AT1G64750.3 deletion of SUV3 suppressor 1(I)6.2e-1647.83Show/hide
Query:  MATELKAASEE-VKVDLFEDDDEFEEFEINE-----------------------------------------EW-EVKEGKEITQQWEDDWDDDDVNDDF
        MA E KAA+ E VK+DLFEDDDEFEEFEINE                                         +W E +E KE++QQWEDDWDDDDVNDDF
Subjt:  MATELKAASEE-VKVDLFEDDDEFEEFEINE-----------------------------------------EW-EVKEGKEITQQWEDDWDDDDVNDDF

Query:  SLQLKRELENNAEKK
        S QL++ELEN  +KK
Subjt:  SLQLKRELENNAEKK

AT5G45010.1 DSS1 homolog on chromosome V2.0e-2276.71Show/hide
Query:  MATELKAASEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MA E KAA E VKVDLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS QLK+ELEN +EKK
Subjt:  MATELKAASEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTGAACTGAAAGCAGCTTCTGAGGAAGTGAAAGTTGACCTATTTGAGGATGATGATGAGTTTGAGGAGTTTGAGATTAATGAAGAGTGGGAAGTGAAGGAAGG
CAAAGAAATCACTCAGCAATGGGAAGATGACTGGGATGATGACGATGTTAATGATGACTTCTCGTTGCAGCTGAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
GTAATAATGAATTAGAAAGCATCGGCTTGCCGACTTGTCTCTCAAGATATCTCGACTCATTTTTCCAATAGAAATCAAAGAAACACGAGACTCCCTCGATCTTCCCTGCT
CCACGGCTCTCTCATCACAACTCTCTCCCAAGATTACAAAGATTTGTAGATCACTTTGAGCTTTGTGATGGCAACTGAACTGAAAGCAGCTTCTGAGGAAGTGAAAGTTG
ACCTATTTGAGGATGATGATGAGTTTGAGGAGTTTGAGATTAATGAAGAGTGGGAAGTGAAGGAAGGCAAAGAAATCACTCAGCAATGGGAAGATGACTGGGATGATGAC
GATGTTAATGATGACTTCTCGTTGCAGCTGAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGAAGAGAATCTAGGCACTTTCCTTTTATCTGTCAACATCTATGTTT
AATTTGCACTCTTTGACCTTCAAAGACGGTTTTATTATGCCTTCTATCACTCAAATAGTGTCATTAAAATAGGCATATTGAATACCTATAGCCTCATTGTACGGCGACTA
GAGATTAATTACGTTATAACATGGTAGTCACCTATTCATAATTTGAAGTTTTACTAATTTTTTGAAGTTGAG
Protein sequenceShow/hide protein sequence
MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK