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CSPI06G18800 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G18800
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 5
Genome locationChr6:17040872..17043173
RNA-Seq ExpressionCSPI06G18800
SyntenyCSPI06G18800
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020712.1 hypothetical protein SDJN02_17399 [Cucurbita argyrosperma subsp. argyrosperma]3.0e-5184.56Show/hide
Query:  LSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVF
        LSLNSISQFL+  +  CF SS LH   +S EAK+ RSRG  +AMITRSNLVEQLREYQIRSKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVF
Subjt:  LSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVF

Query:  SAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        SAVSLYFRHMQLA ILVCITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  SAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
XP_004144225.1 uncharacterized protein LOC101213289 [Cucumis sativus]1.8e-67100Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
XP_008464874.1 PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo]5.7e-6698.67Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLV FLCRCF SSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
XP_022951473.1 uncharacterized protein LOC111454282 [Cucurbita moschata]6.1e-5285.23Show/hide
Query:  LSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVF
        LSLNSISQFL+ F+  CF SS LH   +S EAK+ RSRG  +AMITRSNLVEQLREYQIRSKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVF
Subjt:  LSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVF

Query:  SAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        SAVSLYFRHMQLA ILVCITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  SAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
XP_038884232.1 uncharacterized protein LOC120075129 [Benincasa hispida]1.4e-5993.33Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLV F+CRC  SSILH   SSLEAKKR+SRG  SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
TrEMBL top hitse value%identityAlignment
A0A0A0KIH9 Uncharacterized protein8.5e-68100Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
A0A1S3CMK7 uncharacterized protein LOC103502637 isoform X12.7e-6698.67Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLV FLCRCF SSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
A0A6J1G568 uncharacterized protein LOC1114507864.7e-5082Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLV F+C C    ILH   S    +K  SRG  +AMITRSNLVEQLREYQIRSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQL F+LVCITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
A0A6J1GHS6 uncharacterized protein LOC1114542822.9e-5285.23Show/hide
Query:  LSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVF
        LSLNSISQFL+ F+  CF SS LH   +S EAK+ RSRG  +AMITRSNLVEQLREYQIRSKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVF
Subjt:  LSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVF

Query:  SAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        SAVSLYFRHMQLA ILVCITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  SAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
A0A6J1KBR2 uncharacterized protein LOC1114940241.8e-4980.67Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLV F+C C    I H   S    +K  SRG  +AMITRSNLVEQLREYQIRSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQL F+L+CITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20460.1 unknown protein9.4e-4386.79Show/hide
Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSKH+WASVSFFSSTSN +SSRVDVV+FVIWEL+IL+F VFSAVSLYF+ +QLAFILVC+T+LLL+CMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM
AT1G76185.1 unknown protein3.9e-4183.96Show/hide
Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSKH+WASVSFFSSTSN +SSRVDVV+FVIWEL++L+ +VFSAVSLYFR +QLAFIL+C+T+LLLLCMK+TKQVR ARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCTCTCAATTCCATTTCTCAATTCCTTGTTTCATTCCTTTGTCGCTGCTTTCATTCCTCCATTCTTCACCTTCCCTCTTCCTCCCTTGAGGCAAAGAAAAGAAG
GTCTCGGGGTTCAGCTTCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAAACACGAGTGGGCTTCCGTCTCCTTCTTCTCCT
CTACCTCCAATATTACATCCTCCAGGGTGGATGTAGTGATTTTTGTAATATGGGAACTCATAATACTATCGTTCCTGGTGTTCTCGGCAGTTTCTTTATATTTTCGGCAT
ATGCAGTTGGCATTTATTTTAGTATGCATTACGATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCC
ATTGTCCATG
mRNA sequenceShow/hide mRNA sequence
ATGCTCTCTCTCAATTCCATTTCTCAATTCCTTGTTTCATTCCTTTGTCGCTGCTTTCATTCCTCCATTCTTCACCTTCCCTCTTCCTCCCTTGAGGCAAAGAAAAGAAG
GTCTCGGGGTTCAGCTTCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAAACACGAGTGGGCTTCCGTCTCCTTCTTCTCCT
CTACCTCCAATATTACATCCTCCAGGGTGGATGTAGTGATTTTTGTAATATGGGAACTCATAATACTATCGTTCCTGGTGTTCTCGGCAGTTTCTTTATATTTTCGGCAT
ATGCAGTTGGCATTTATTTTAGTATGCATTACGATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCC
ATTGTCCATG
Protein sequenceShow/hide protein sequence
MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRH
MQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM