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CSPI06G18890 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G18890
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCX9C domain-containing protein
Genome locationChr6:17104148..17106880
RNA-Seq ExpressionCSPI06G18890
SyntenyCSPI06G18890
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR017264 - Ribosomal protein MRP10, mitochondrial
IPR031731 - IMS import disulfide relay-system, CHCH-CHCH-like Cx9C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647215.1 hypothetical protein Csa_018966 [Cucumis sativus]7.6e-41100Show/hide
Query:  SVTMGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
        SVTMGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
Subjt:  SVTMGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
XP_004144220.1 uncharacterized protein LOC101212239 [Cucumis sativus]2.4e-39100Show/hide
Query:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
        MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
Subjt:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
XP_008464883.1 PREDICTED: uncharacterized protein LOC103502643 [Cucumis melo]9.6e-3691.25Show/hide
Query:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
        MGRKAGSLFINPKKFGNL+KPCMKEMVSFLNC++LNQNNDEKCTRHKELLNTCMDAQA R+KKPWGSINY LQRL+RGRK
Subjt:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
XP_022157885.1 uncharacterized protein LOC111024495 isoform X1 [Momordica charantia]3.1e-3484.15Show/hide
Query:  VTMGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
        V MGRKAG+L+INPKKFG L+KPCMKEM+SFLNCIALNQNND+KCTR+KELLNTCMDAQ+ R++KPWGSINYHLQRL+RGRK
Subjt:  VTMGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
XP_038884108.1 uncharacterized protein LOC120075034 [Benincasa hispida]3.1e-3487.5Show/hide
Query:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
        MGRKAGSL+INPKKFG L KPCMKEM++FLNCIALNQNND+KCTR KELLNTCMDAQA+R++KPWGSINYHLQRLNRGRK
Subjt:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
TrEMBL top hitse value%identityAlignment
A0A0A0KD09 CX9C domain-containing protein3.7e-41100Show/hide
Query:  SVTMGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
        SVTMGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
Subjt:  SVTMGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
A0A1S3CN09 uncharacterized protein LOC1035026434.6e-3691.25Show/hide
Query:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
        MGRKAGSLFINPKKFGNL+KPCMKEMVSFLNC++LNQNNDEKCTRHKELLNTCMDAQA R+KKPWGSINY LQRL+RGRK
Subjt:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
A0A5A7TA50 CX9C domain-containing protein4.6e-3691.25Show/hide
Query:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
        MGRKAGSLFINPKKFGNL+KPCMKEMVSFLNC++LNQNNDEKCTRHKELLNTCMDAQA R+KKPWGSINY LQRL+RGRK
Subjt:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
A0A6J1DU96 uncharacterized protein LOC111024495 isoform X11.5e-3484.15Show/hide
Query:  VTMGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
        V MGRKAG+L+INPKKFG L+KPCMKEM+SFLNCIALNQNND+KCTR+KELLNTCMDAQ+ R++KPWGSINYHLQRL+RGRK
Subjt:  VTMGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
A0A6J1KBS0 uncharacterized protein LOC1114940312.0e-3485Show/hide
Query:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
        MGRKAG+L+INPKKFG L+KPCMKEM+SFLNC+ALN NNDEKCTRHKELLNTCMDAQ+ R++KPWGSINYHLQRL+RGRK
Subjt:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G47278.1 unknown protein9.3e-2968.75Show/hide
Query:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
        MGRKAG+L+INPKK GNL KPCMKEMVSFLNC+ALN   D+KC + K+LL+ CM  Q+    K WG+INYHLQRL RGRK
Subjt:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
AT1G47278.2 unknown protein9.3e-2968.75Show/hide
Query:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK
        MGRKAG+L+INPKK GNL KPCMKEMVSFLNC+ALN   D+KC + K+LL+ CM  Q+    K WG+INYHLQRL RGRK
Subjt:  MGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTCMDAQATRSKKPWGSINYHLQRLNRGRK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTGTGAGGCTCTCTGCGGTTTGTTTCCATTCCACCGACTGTCCTCCCTCCCTCCCTCCAGACTCCTCCTCCGGCGAGCAGAACCCAACTGCAACGAGCGGTGG
CGGCGCAGCGTCACATCCCGACCTGCTTTTTCTCTCCCACCCTTCTTTTCAGTCTGTAACAATGGGTAGGAAAGCTGGTAGTTTGTTTATCAACCCAAAGAAGTTTGGCA
ATCTTAACAAACCTTGCATGAAGGAAATGGTATCATTTCTCAATTGCATAGCCCTTAACCAAAACAACGATGAGAAGTGCACCAGACATAAGGAACTTCTAAATACTTGC
ATGGATGCTCAGGCCACGAGAAGCAAGAAACCTTGGGGTAGCATTAATTACCACTTGCAGAGGCTTAACAGAGGAAGAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAATTGTGAGGCTCTCTGCGGTTTGTTTCCATTCCACCGACTGTCCTCCCTCCCTCCCTCCAGACTCCTCCTCCGGCGAGCAGAACCCAACTGCAACGAGCGGTGG
CGGCGCAGCGTCACATCCCGACCTGCTTTTTCTCTCCCACCCTTCTTTTCAGTCTGTAACAATGGGTAGGAAAGCTGGTAGTTTGTTTATCAACCCAAAGAAGTTTGGCA
ATCTTAACAAACCTTGCATGAAGGAAATGGTATCATTTCTCAATTGCATAGCCCTTAACCAAAACAACGATGAGAAGTGCACCAGACATAAGGAACTTCTAAATACTTGC
ATGGATGCTCAGGCCACGAGAAGCAAGAAACCTTGGGGTAGCATTAATTACCACTTGCAGAGGCTTAACAGAGGAAGAAAGTAG
Protein sequenceShow/hide protein sequence
MKIVRLSAVCFHSTDCPPSLPPDSSSGEQNPTATSGGGAASHPDLLFLSHPSFQSVTMGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELLNTC
MDAQATRSKKPWGSINYHLQRLNRGRK