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CSPI06G19120 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G19120
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRWP-RK domain-containing protein
Genome locationChr6:17341628..17342806
RNA-Seq ExpressionCSPI06G19120
SyntenyCSPI06G19120
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR044607 - Transcription factor RKD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647226.1 hypothetical protein Csa_019049 [Cucumis sativus]3.0e-9598.84Show/hide
Query:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP
        MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQS AEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP
Subjt:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP

Query:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
        SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMF+
Subjt:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE

XP_008445526.1 PREDICTED: protein RKD2-like isoform X1 [Cucumis melo]2.1e-8893.64Show/hide
Query:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP
        MAADPMAAALFDEVEDQDYPYESSINANILNFGND+NPTL+DLQS AEQPAG GFGNMGMVELLR+FSYG+GQYDSEAGPSNIGGEEED  QDDNY NIP
Subjt:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP

Query:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
        SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGV+SRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMF+
Subjt:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE

XP_008445527.1 PREDICTED: uncharacterized protein LOC103488516 isoform X2 [Cucumis melo]2.1e-8893.64Show/hide
Query:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP
        MAADPMAAALFDEVEDQDYPYESSINANILNFGND+NPTL+DLQS AEQPAG GFGNMGMVELLR+FSYG+GQYDSEAGPSNIGGEEED  QDDNY NIP
Subjt:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP

Query:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
        SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGV+SRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMF+
Subjt:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE

XP_023002694.1 uncharacterized protein LOC111496477 [Cucurbita maxima]3.5e-5973.81Show/hide
Query:  DQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGC----------GFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVES
        DQD PY+SSINANILNF ND+NPTLDDLQS AEQP              F NMGMVELL  FS+G GQYDSEAGPSN  GE     ++D+ T IPS+VES
Subjt:  DQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGC----------GFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVES

Query:  KLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
        KLL IWP+TP+PFLCSCCQVLREFLH+NGV+SRKLEIHGRLGMI HAILEHKPIVNVDNISPQYQMF+
Subjt:  KLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE

XP_031742886.1 uncharacterized protein LOC116404509 [Cucumis sativus]1.4e-9599.42Show/hide
Query:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP
        MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQS AEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP
Subjt:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP

Query:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
        SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
Subjt:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE

TrEMBL top hitse value%identityAlignment
A0A0A0KIL1 Uncharacterized protein5.2e-9399.4Show/hide
Query:  MAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVES
        MAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQS AEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVES
Subjt:  MAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVES

Query:  KLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
        KLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
Subjt:  KLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE

A0A1S3BCG6 protein RKD2-like isoform X11.0e-8893.64Show/hide
Query:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP
        MAADPMAAALFDEVEDQDYPYESSINANILNFGND+NPTL+DLQS AEQPAG GFGNMGMVELLR+FSYG+GQYDSEAGPSNIGGEEED  QDDNY NIP
Subjt:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP

Query:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
        SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGV+SRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMF+
Subjt:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE

A0A1S3BCY1 uncharacterized protein LOC103488516 isoform X21.0e-8893.64Show/hide
Query:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP
        MAADPMAAALFDEVEDQDYPYESSINANILNFGND+NPTL+DLQS AEQPAG GFGNMGMVELLR+FSYG+GQYDSEAGPSNIGGEEED  QDDNY NIP
Subjt:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP

Query:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
        SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGV+SRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMF+
Subjt:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE

A0A5A7V999 Protein RKD2-like isoform X11.0e-8893.64Show/hide
Query:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP
        MAADPMAAALFDEVEDQDYPYESSINANILNFGND+NPTL+DLQS AEQPAG GFGNMGMVELLR+FSYG+GQYDSEAGPSNIGGEEED  QDDNY NIP
Subjt:  MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIP

Query:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
        SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGV+SRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMF+
Subjt:  SDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE

A0A6J1KR66 uncharacterized protein LOC1114964771.7e-5973.81Show/hide
Query:  DQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGC----------GFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVES
        DQD PY+SSINANILNF ND+NPTLDDLQS AEQP              F NMGMVELL  FS+G GQYDSEAGPSN  GE     ++D+ T IPS+VES
Subjt:  DQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGC----------GFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVES

Query:  KLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE
        KLL IWP+TP+PFLCSCCQVLREFLH+NGV+SRKLEIHGRLGMI HAILEHKPIVNVDNISPQYQMF+
Subjt:  KLLPIWPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G16100.1 unknown protein7.6e-0450Show/hide
Query:  CSCCQVLREFLH-TNGVHSRKLEIHGRLGMISHAIL
        C+CC++LRE +H   G    KL+I+G +G I HAIL
Subjt:  CSCCQVLREFLH-TNGVHSRKLEIHGRLGMISHAIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGGATCCAATGGCGGCGGCGTTGTTCGACGAAGTAGAAGATCAGGATTATCCATACGAGAGTTCCATCAACGCGAACATCCTGAACTTTGGGAACGACCGAAA
CCCAACGCTGGATGATTTGCAGTCGATGGCGGAGCAGCCAGCGGGGTGTGGGTTTGGGAACATGGGAATGGTGGAATTACTGAGGCAGTTTAGTTATGGTAACGGGCAAT
ATGATTCTGAAGCGGGGCCGTCCAATATTGGTGGGGAAGAGGAAGATCCTCATCAGGATGATAATTATACGAATATTCCGAGTGATGTGGAATCTAAGTTGCTTCCTATT
TGGCCTCTCACTCCTCTTCCTTTTTTATGTAGTTGTTGCCAAGTTCTTCGAGAATTTCTTCATACTAATGGAGTGCACAGCAGAAAACTAGAGATTCATGGTAGGCTAGG
GATGATTAGCCATGCAATATTGGAGCATAAACCCATTGTTAATGTGGATAACATAAGTCCTCAGTATCAAATGTTCGAGTAA
mRNA sequenceShow/hide mRNA sequence
CACATGGCAGCGGATCCAATGGCGGCGGCGTTGTTCGACGAAGTAGAAGATCAGGATTATCCATACGAGAGTTCCATCAACGCGAACATCCTGAACTTTGGGAACGACCG
AAACCCAACGCTGGATGATTTGCAGTCGATGGCGGAGCAGCCAGCGGGGTGTGGGTTTGGGAACATGGGAATGGTGGAATTACTGAGGCAGTTTAGTTATGGTAACGGGC
AATATGATTCTGAAGCGGGGCCGTCCAATATTGGTGGGGAAGAGGAAGATCCTCATCAGGATGATAATTATACGAATATTCCGAGTGATGTGGAATCTAAGTTGCTTCCT
ATTTGGCCTCTCACTCCTCTTCCTTTTTTATGTAGTTGTTGCCAAGTTCTTCGAGAATTTCTTCATACTAATGGAGTGCACAGCAGAAAACTAGAGATTCATGGTAGGCT
AGGGATGATTAGCCATGCAATATTGGAGCATAAACCCATTGTTAATGTGGATAACATAAGTCCTCAGTATCAAATGTTCGAGTAA
Protein sequenceShow/hide protein sequence
MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSMAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDPHQDDNYTNIPSDVESKLLPI
WPLTPLPFLCSCCQVLREFLHTNGVHSRKLEIHGRLGMISHAILEHKPIVNVDNISPQYQMFE