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CSPI06G19130 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G19130
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRWP-RK domain-containing protein
Genome locationChr6:17342940..17343835
RNA-Seq ExpressionCSPI06G19130
SyntenyCSPI06G19130
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR003035 - RWP-RK domain
IPR044607 - Transcription factor RKD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647226.1 hypothetical protein Csa_019049 [Cucumis sativus]1.2e-88100Show/hide
Query:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
        MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
Subjt:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC

Query:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
        NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
Subjt:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI

XP_008445526.1 PREDICTED: protein RKD2-like isoform X1 [Cucumis melo]1.0e-8497.59Show/hide
Query:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
        MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSED+EMEQ TPDCQNEPPEQPEEQPP RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
Subjt:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC

Query:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
        NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKEL DFCARIRI
Subjt:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI

XP_008445527.1 PREDICTED: uncharacterized protein LOC103488516 isoform X2 [Cucumis melo]7.4e-8396.99Show/hide
Query:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
        MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNS D+EMEQ TPDCQNEPPEQPEEQPP RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
Subjt:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC

Query:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
        NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKEL DFCARIRI
Subjt:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI

XP_031744044.1 protein RKD3 isoform X1 [Cucumis sativus]1.2e-88100Show/hide
Query:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
        MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
Subjt:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC

Query:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
        NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
Subjt:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI

XP_031744045.1 protein RKD4 isoform X2 [Cucumis sativus]8.5e-8799.4Show/hide
Query:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
        MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNS DDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
Subjt:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC

Query:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
        NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
Subjt:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI

TrEMBL top hitse value%identityAlignment
A0A0A0KGT8 RWP-RK domain-containing protein5.7e-89100Show/hide
Query:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
        MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
Subjt:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC

Query:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
        NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
Subjt:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI

A0A1S3BCG6 protein RKD2-like isoform X15.0e-8597.59Show/hide
Query:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
        MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSED+EMEQ TPDCQNEPPEQPEEQPP RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
Subjt:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC

Query:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
        NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKEL DFCARIRI
Subjt:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI

A0A1S3BCY1 uncharacterized protein LOC103488516 isoform X23.6e-8396.99Show/hide
Query:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
        MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNS D+EMEQ TPDCQNEPPEQPEEQPP RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
Subjt:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC

Query:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
        NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKEL DFCARIRI
Subjt:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI

A0A5A7V999 Protein RKD2-like isoform X15.0e-8597.59Show/hide
Query:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
        MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSED+EMEQ TPDCQNEPPEQPEEQPP RRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
Subjt:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC

Query:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
        NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKEL DFCARIRI
Subjt:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI

A0A6J1BQU6 protein RKD3-like1.1e-7689.16Show/hide
Query:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC
        MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSED++M+QP P+ QNEPPE+P      RRPSLAAQR RTGRMTVNDVW+YLHLPISEASKKLNVC
Subjt:  MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVC

Query:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI
        NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTR RAEAEIERVQKEL DFCA IRI
Subjt:  NTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI

SwissProt top hitse value%identityAlignment
Q0JC27 Protein NLP27.6e-0634.78Show/hide
Query:  PEQPEEQPPRRRPSLAAQRQRTGRMTVNDVW-EYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTR
        PE  E+  P        +R    +    DV  +Y    + +A+K L VC T LK+ICR  G+SRWP RKI    R +  ++  +NS +G  R
Subjt:  PEQPEEQPPRRRPSLAAQRQRTGRMTVNDVW-EYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTR

Q84TH9 Protein NLP79.0e-0742.11Show/hide
Query:  EYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG
        +Y    + +A+K L VC T +K+ICR+ G+SRWP RKI+   R I  L+  + S  G
Subjt:  EYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG

Q9LE38 Protein NLP44.5e-0632.05Show/hide
Query:  SLAAQRQRT---GRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG
        S+ A+++RT     +T++ + +Y    + +A+K + VC T LK+ICR+ G+ RWP RKI+     +  ++  ++S  G
Subjt:  SLAAQRQRT---GRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG

Q9M1B0 Protein NLP91.2e-0635.94Show/hide
Query:  MTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG
        +++N + +Y    + +A+K L VC T LK+ICR+ G+ RWP RKI    R +  ++  ++S  G
Subjt:  MTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG

Q9M9U9 Protein RKD19.0e-0731.94Show/hide
Query:  YLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKE
        Y ++PI++A+++LN+  T+LKK CR  G+ RWP+RK+ S ++ I+ ++        +   +    +E+++KE
Subjt:  YLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKE

Arabidopsis top hitse value%identityAlignment
AT1G18790.1 RWP-RK domain-containing protein6.4e-0831.94Show/hide
Query:  YLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKE
        Y ++PI++A+++LN+  T+LKK CR  G+ RWP+RK+ S ++ I+ ++        +   +    +E+++KE
Subjt:  YLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKE

AT1G20640.1 Plant regulator RWP-RK family protein3.2e-0732.05Show/hide
Query:  SLAAQRQRT---GRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG
        S+ A+++RT     +T++ + +Y    + +A+K + VC T LK+ICR+ G+ RWP RKI+     +  ++  ++S  G
Subjt:  SLAAQRQRT---GRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG

AT3G59580.1 Plant regulator RWP-RK family protein8.4e-0835.94Show/hide
Query:  MTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG
        +++N + +Y    + +A+K L VC T LK+ICR+ G+ RWP RKI    R +  ++  ++S  G
Subjt:  MTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG

AT3G59580.2 Plant regulator RWP-RK family protein8.4e-0835.94Show/hide
Query:  MTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG
        +++N + +Y    + +A+K L VC T LK+ICR+ G+ RWP RKI    R +  ++  ++S  G
Subjt:  MTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG

AT4G24020.1 NIN like protein 76.4e-0842.11Show/hide
Query:  EYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG
        +Y    + +A+K L VC T +K+ICR+ G+SRWP RKI+   R I  L+  + S  G
Subjt:  EYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCAGATCCAATGTCCAATTTCTACGATGCCCTTTGTGTTGGAATTGATTGGTTTGAAAATCTCAATACTGATGGTTTCTTTCAACTCTCTCCTGATAATTCTGA
AGATGATGAAATGGAACAACCCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCGGAAGAGCAGCCTCCAAGACGACGACCCTCCCTTGCTGCACAGCGACAAAGAA
CGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTTCCAATATCAGAAGCTTCAAAAAAACTGAATGTGTGCAATACTGTATTGAAGAAAATATGCCGTCGG
AGCGGTCTTAGCCGGTGGCCTTACAGAAAGATACGTAGTTACGAGAGACGAATAGCTGCACTGAGAGCCACCATGAATTCAAGCTACGGAGATACGAGAGTTCGAGCTGA
AGCCGAGATTGAAAGGGTTCAAAAAGAACTTACTGATTTTTGTGCTCGAATCAGGATTTGA
mRNA sequenceShow/hide mRNA sequence
AAAGCAATTTCTACTACAGTATTGTCTGAAGCAAATATTAGAAGATTACAATATGATTCCAGATCCAATGTCCAATTTCTACGATGCCCTTTGTGTTGGAATTGATTGGT
TTGAAAATCTCAATACTGATGGTTTCTTTCAACTCTCTCCTGATAATTCTGAAGATGATGAAATGGAACAACCCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCG
GAAGAGCAGCCTCCAAGACGACGACCCTCCCTTGCTGCACAGCGACAAAGAACGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTTCCAATATCAGAAGC
TTCAAAAAAACTGAATGTGTGCAATACTGTATTGAAGAAAATATGCCGTCGGAGCGGTCTTAGCCGGTGGCCTTACAGAAAGATACGTAGTTACGAGAGACGAATAGCTG
CACTGAGAGCCACCATGAATTCAAGCTACGGAGATACGAGAGTTCGAGCTGAAGCCGAGATTGAAAGGGTTCAAAAAGAACTTACTGATTTTTGTGCTCGAATCAGGATT
TGA
Protein sequenceShow/hide protein sequence
MIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDEMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRR
SGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELTDFCARIRI