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CSPI06G19290 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G19290
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransmembrane protein, putative
Genome locationChr6:17440035..17440974
RNA-Seq ExpressionCSPI06G19290
SyntenyCSPI06G19290
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064730.1 putative transmembrane protein [Cucumis melo var. makuwa]1.9e-9488.24Show/hide
Query:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAAD-NKTDENVSPTTTTP--FQAANPSGGEAENEGEMKELPLPPKM
        MVRSFPTDDNPLIHPAI LFLLAAGMAAAI+MITTLCGVRSRRRSTPSE SS  A + NK +ENVSPTTTTP    AANPS  E ENEGE+KELPLPPKM
Subjt:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAAD-NKTDENVSPTTTTP--FQAANPSGGEAENEGEMKELPLPPKM

Query:  QQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMS
        QQV S+SPP+QI KSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKE+IKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMS
Subjt:  QQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMS

Query:  ISMSRQNSAVEAEALQSSEAK
        ISMSRQNSA EAEAL +SEAK
Subjt:  ISMSRQNSAVEAEALQSSEAK

KAG6585751.1 hypothetical protein SDJN03_18484, partial [Cucurbita argyrosperma subsp. sororia]5.4e-5764.53Show/hide
Query:  LAAGMAAAISMITTLCGVRSR-RRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGE-----MKELPLPPKMQQVASTSPPSQISKSASE
        +AAGM AAI+MIT LCGVRSR RRS+P  ++S   AD K D N S TTT+      P  GE+ N+G      MKELPLPPKMQQVAS SPPS+I+KSASE
Subjt:  LAAGMAAAISMITTLCGVRSR-RRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGE-----MKELPLPPKMQQVASTSPPSQISKSASE

Query:  RKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSS
        R+L HM S+++KVPRS SV R  L+EG  RRKE++  E+ IW KTIILGEKC+VSDEEDG+IYEGKGK+I+AYHPR+PSSMSIS+SRQ+SA++AEAL   
Subjt:  RKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSS

Query:  EAK
         AK
Subjt:  EAK

KAG6598610.1 hypothetical protein SDJN03_08388, partial [Cucurbita argyrosperma subsp. sororia]2.5e-7873.76Show/hide
Query:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGE---MKELPLPPKM
        MVRSFPTD+NPLIHPAI L LLAAGMAAAI+MITTLCG RSR+  T SE SS  AADNK DEN SPT        NPSGGE  N+G+   +KELPLPPKM
Subjt:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGE---MKELPLPPKM

Query:  QQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMS
        QQ+ S SPP+QISKSASERKL HM+SM++ VPRSLSV R++LD+GR ++K++IKGEDSIWTKTIILGEKCKV+DEEDGIIYEGKGKKI+AYHPRAPSSMS
Subjt:  QQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMS

Query:  ISMSRQNSAVEAEALQSSEAK
         S+SRQ SA++AEAL S E K
Subjt:  ISMSRQNSAVEAEALQSSEAK

KGN47811.2 hypothetical protein Csa_018925 [Cucumis sativus]1.3e-111100Show/hide
Query:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKELPLPPKMQQV
        MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKELPLPPKMQQV
Subjt:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKELPLPPKMQQV

Query:  ASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISM
        ASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISM
Subjt:  ASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISM

Query:  SRQNSAVEAEALQSSEAK
        SRQNSAVEAEALQSSEAK
Subjt:  SRQNSAVEAEALQSSEAK

XP_023002698.1 uncharacterized protein LOC111496482 [Cucurbita maxima]2.2e-6666.37Show/hide
Query:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEA-----ENEGEMKELPLPP
        MV SFPTD+N LIHPAI L L+AAGM  AI+MIT LCGVRSRR  +PSE SS   AD K D N S TTT+    A P+ G++     E E  MKELPLPP
Subjt:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEA-----ENEGEMKELPLPP

Query:  KMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSS
        KMQQVAS SPPSQI+KSASER+L HM  M+++VPRS SV R  L+EG +RRKE++K E+ IW KTIILGEKC+VSDEEDG+IYEGKGK+I+AYHPR+PSS
Subjt:  KMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSS

Query:  MSISMSRQNSAVEAEALQSSEAK
        MSIS+SRQ+SA++AEAL    AK
Subjt:  MSISMSRQNSAVEAEALQSSEAK

TrEMBL top hitse value%identityAlignment
A0A0A0KD46 Uncharacterized protein4.5e-94100Show/hide
Query:  MITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKELPLPPKMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRS
        MITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKELPLPPKMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRS
Subjt:  MITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKELPLPPKMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRS

Query:  LSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK
        LSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK
Subjt:  LSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK

A0A5A7VC31 Putative transmembrane protein9.2e-9588.24Show/hide
Query:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAAD-NKTDENVSPTTTTP--FQAANPSGGEAENEGEMKELPLPPKM
        MVRSFPTDDNPLIHPAI LFLLAAGMAAAI+MITTLCGVRSRRRSTPSE SS  A + NK +ENVSPTTTTP    AANPS  E ENEGE+KELPLPPKM
Subjt:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAAD-NKTDENVSPTTTTP--FQAANPSGGEAENEGEMKELPLPPKM

Query:  QQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMS
        QQV S+SPP+QI KSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKE+IKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMS
Subjt:  QQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMS

Query:  ISMSRQNSAVEAEALQSSEAK
        ISMSRQNSA EAEAL +SEAK
Subjt:  ISMSRQNSAVEAEALQSSEAK

A0A6A1WQ24 Uncharacterized protein3.3e-3644.16Show/hide
Query:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSS--HAAADNKTDENVSPTTTT--------PFQAANPSGGEA---ENEGE
        MVR  PT++ PL HP +   LLA G+AAAI+ IT LCG R  +R +P   SS  H  A+     N++ TT T        P +AA P+  E    + E +
Subjt:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSS--HAAADNKTDENVSPTTTT--------PFQAANPSGGEA---ENEGE

Query:  MKELPLPPKMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITA
         +ELPLPP M  +  +    +I+KS+S+R L   +++++K+PRSLS+ R    E   +RK+ +  EDSIW KTIILGEKCKV DE+D +IY+GKGK+I+ 
Subjt:  MKELPLPPKMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITA

Query:  YHPRAPSSMSISMSRQNSAVEAEALQSSEAK
        YHP+ PS   IS+SR+ S  E EA    E +
Subjt:  YHPRAPSSMSISMSRQNSAVEAEALQSSEAK

A0A6J1KUB9 uncharacterized protein LOC1114964821.1e-6666.37Show/hide
Query:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEA-----ENEGEMKELPLPP
        MV SFPTD+N LIHPAI L L+AAGM  AI+MIT LCGVRSRR  +PSE SS   AD K D N S TTT+    A P+ G++     E E  MKELPLPP
Subjt:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEA-----ENEGEMKELPLPP

Query:  KMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSS
        KMQQVAS SPPSQI+KSASER+L HM  M+++VPRS SV R  L+EG +RRKE++K E+ IW KTIILGEKC+VSDEEDG+IYEGKGK+I+AYHPR+PSS
Subjt:  KMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSS

Query:  MSISMSRQNSAVEAEALQSSEAK
        MSIS+SRQ+SA++AEAL    AK
Subjt:  MSISMSRQNSAVEAEALQSSEAK

A0A7N2KRH9 Uncharacterized protein1.7e-3241.43Show/hide
Query:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTP------SEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKELPLP
        M R  P+D+N LIHP     LLA GM A I+MIT LCGVRSR++S+P      ++   ++   N     V+ T++   +           + ++KELPLP
Subjt:  MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTP------SEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKELPLP

Query:  PKMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVR----NHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEED-GIIYEGKGKKITAYH
        P M+ +  +   + I+KS+SER+L    S+S+K+PRSLS  +       +E  Q++K  +  ED++W KTIILGEKCKV  E+D  +IY+GKG +I+AYH
Subjt:  PKMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVR----NHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEED-GIIYEGKGKKITAYH

Query:  PRAPSSMSIS
        P+ PS  S+S
Subjt:  PRAPSSMSIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G26114.1 unknown protein6.6e-0534.18Show/hide
Query:  VVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKIT---AYHPRAPSSMSISMSRQNSAVEA
        V++   +E +  RK+++  ++SI    IILGE+C+V D E+G   E + +++     Y PR+ SS+SIS ++ N  + A
Subjt:  VVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKIT---AYHPRAPSSMSISMSRQNSAVEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGAAGCTTTCCGACGGATGACAATCCGTTAATTCATCCGGCGATACCTCTGTTCCTTCTAGCGGCCGGAATGGCAGCAGCTATTTCCATGATCACGACGCTATG
TGGTGTTCGATCTCGAAGAAGATCGACGCCGTCCGAAGATTCGTCTCATGCCGCCGCAGACAACAAAACAGACGAAAATGTTTCCCCAACAACAACGACACCGTTTCAGG
CCGCAAACCCATCTGGTGGAGAAGCAGAGAACGAGGGGGAAATGAAAGAACTTCCCCTGCCTCCAAAAATGCAACAAGTGGCGAGTACGAGCCCACCGAGCCAAATATCG
AAATCAGCATCGGAGAGGAAATTGAATCATATGAGAAGCATGAGCATTAAAGTTCCTAGAAGTCTTTCGGTTGTGAGGAATCATTTGGATGAAGGGAGACAGAGGAGGAA
AGAGAGGATTAAAGGGGAAGATTCCATTTGGACAAAGACAATAATTTTAGGGGAAAAATGTAAAGTTTCAGATGAAGAAGATGGAATCATATATGAAGGAAAAGGGAAGA
AGATAACAGCTTATCATCCGAGAGCTCCTAGTTCGATGTCGATATCAATGTCGAGGCAGAATTCCGCCGTTGAAGCTGAAGCTCTGCAAAGCTCAGAAGCAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATTTTAACCAAATCCTGCCTTTTTTTGTCTTCTTGTTCTTGTTCTTCCACCTTTCTGTTTTGTTTTATTTTGTGTTAGGTTGAAAAATAAAAACAAGAAGAAGAACAAAA
AAAAAAGAAAAGAAAAAAAAACAGAGTATTCAGGGAATGAAGAGATGAAAACAGAGTTCCTCTGTTGGGTTTTCTTTTCCTCTGTTTTTTAAATGTTTTAGTCATGGTGA
GAAGCTTTCCGACGGATGACAATCCGTTAATTCATCCGGCGATACCTCTGTTCCTTCTAGCGGCCGGAATGGCAGCAGCTATTTCCATGATCACGACGCTATGTGGTGTT
CGATCTCGAAGAAGATCGACGCCGTCCGAAGATTCGTCTCATGCCGCCGCAGACAACAAAACAGACGAAAATGTTTCCCCAACAACAACGACACCGTTTCAGGCCGCAAA
CCCATCTGGTGGAGAAGCAGAGAACGAGGGGGAAATGAAAGAACTTCCCCTGCCTCCAAAAATGCAACAAGTGGCGAGTACGAGCCCACCGAGCCAAATATCGAAATCAG
CATCGGAGAGGAAATTGAATCATATGAGAAGCATGAGCATTAAAGTTCCTAGAAGTCTTTCGGTTGTGAGGAATCATTTGGATGAAGGGAGACAGAGGAGGAAAGAGAGG
ATTAAAGGGGAAGATTCCATTTGGACAAAGACAATAATTTTAGGGGAAAAATGTAAAGTTTCAGATGAAGAAGATGGAATCATATATGAAGGAAAAGGGAAGAAGATAAC
AGCTTATCATCCGAGAGCTCCTAGTTCGATGTCGATATCAATGTCGAGGCAGAATTCCGCCGTTGAAGCTGAAGCTCTGCAAAGCTCAGAAGCAAAATAAACCCAAGAAG
AAGAAGAAGAAGAAGAAGAAGAAGGATACAATTTTAAAATCAATGGCTGATGAAATTTGA
Protein sequenceShow/hide protein sequence
MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKELPLPPKMQQVASTSPPSQIS
KSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK