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CSPI06G19300 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G19300
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranscription and mRNA export factor ENY2
Genome locationChr6:17463622..17466457
RNA-Seq ExpressionCSPI06G19300
SyntenyCSPI06G19300
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006368 - transcription elongation from RNA polymerase II promoter (biological process)
GO:0015031 - protein transport (biological process)
GO:0016578 - histone deubiquitination (biological process)
GO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005643 - nuclear pore (cellular component)
GO:0070390 - transcription export complex 2 (cellular component)
GO:0071819 - DUBm complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR018783 - Transcription factor, enhancer of yellow 2
IPR038212 - Transcription factor EnY2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445505.1 PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo]5.4e-5399.1Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLGSTAI
        RIRSFL STAI
Subjt:  RIRSFLGSTAI

XP_011657386.1 transcription and mRNA export factor ENY2 [Cucumis sativus]1.1e-53100Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLGSTAI
        RIRSFLGSTAI
Subjt:  RIRSFLGSTAI

XP_022951096.1 transcription and mRNA export factor SUS1 [Cucurbita moschata]2.9e-5196.4Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLGSTAI
        RIRSFL STAI
Subjt:  RIRSFLGSTAI

XP_023002845.1 transcription and mRNA export factor ENY2 [Cucurbita maxima]6.6e-5195.5Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLGSTAI
        RIR+FL STAI
Subjt:  RIRSFLGSTAI

XP_038884208.1 transcription and mRNA export factor ENY2 [Benincasa hispida]4.5e-5297.3Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MRASINRPPTPEPEDDREH PTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLGSTAI
        RIRSFL STAI
Subjt:  RIRSFLGSTAI

TrEMBL top hitse value%identityAlignment
A0A0A0KIM7 Transcription and mRNA export factor ENY25.2e-54100Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLGSTAI
        RIRSFLGSTAI
Subjt:  RIRSFLGSTAI

A0A1S3BDR5 Transcription and mRNA export factor ENY22.6e-5399.1Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLGSTAI
        RIRSFL STAI
Subjt:  RIRSFLGSTAI

A0A6J1BSW0 Transcription and mRNA export factor ENY22.7e-5095.5Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MRASINRPPTPE EDDR+ Q TFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLGSTAI
        RIRSFLGSTAI
Subjt:  RIRSFLGSTAI

A0A6J1GGQ4 Transcription and mRNA export factor ENY21.4e-5196.4Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLGSTAI
        RIRSFL STAI
Subjt:  RIRSFLGSTAI

A0A6J1KQ41 Transcription and mRNA export factor ENY23.2e-5195.5Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLGSTAI
        RIR+FL STAI
Subjt:  RIRSFLGSTAI

SwissProt top hitse value%identityAlignment
B5FZ63 Transcription and mRNA export factor ENY24.4e-2668.24Show/hide
Query:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA
        +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FL   A
Subjt:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA

Q3ZBJ0 Transcription and mRNA export factor ENY23.4e-2668.24Show/hide
Query:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA
        +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FL   A
Subjt:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA

Q6NQ54 Transcription and mRNA export factor ENY24.4e-3460.87Show/hide
Query:  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKA
        M+ S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKA
Subjt:  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKA

Query:  ELLQRIRSFLGSTAI
        ELL RI++F+ S A+
Subjt:  ELLQRIRSFLGSTAI

Q9JIX0 Transcription and mRNA export factor ENY23.4e-2668.24Show/hide
Query:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA
        +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FL   A
Subjt:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA

Q9NPA8 Transcription and mRNA export factor ENY23.4e-2668.24Show/hide
Query:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA
        +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FL   A
Subjt:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA

Arabidopsis top hitse value%identityAlignment
AT3G27100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).3.2e-3560.87Show/hide
Query:  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKA
        M+ S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKA
Subjt:  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKA

Query:  ELLQRIRSFLGSTAI
        ELL RI++F+ S A+
Subjt:  ELLQRIRSFLGSTAI

AT3G27100.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).6.0e-2656.38Show/hide
Query:  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
        M+ S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGR  +
Subjt:  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCGGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGCTGATTGAAAGTGGTGAGAA
AGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTCA
GTGTTGATGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGGATCAACAGCC
ATCTAA
mRNA sequenceShow/hide mRNA sequence
TCGTCGTCTCCAGTCAGCTGTTCCTCGCGGTGTAGTTGGACGCGCTGTGTCGCCGTGAAAGTGAATATTTGTCAAGAACAATCTCTAACCATAATATTTGATAATTGAAT
GAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCGGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGCTGATTGAAAGTGGTGAGAAAG
AGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTCAGT
GTTGATGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGGATCAACAGCCAT
CTAACATACACAAGATGACTGCAAGCTGCAGAAAAGTATCAACTTCATATCCTTACCAAACCCGCTAAAACCAATTAATCTATACCTTATATAATGAATTTGTTGGACTT
ATCAAATTTTATCGATTCTGTTGGAGAATCCAAGTCAAGTTCCGTTTTCAGGTTACGAAGGATGTAGCATTGTGTAAGCTCGTAGTCAACAACAACCGGGTTTGTGAGTG
TTTTTGTTGTAGAATATGCATGTAAAAAGCTAGCTGTATGAGCTTTATAAAATACTCTCTAACTCTCATGATAACAAGTCTGTTTTTACTGAAAATTTGGTCAATTGTAA
CTCTTGATTGGGTCTACTTTGATGGTATATTATATATCTTGGATCTGTTCCATTCTTACTTTATTTACTATATATTGGGCGTGGGAATCAAACCTCTGACTTTGA
Protein sequenceShow/hide protein sequence
MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA
I