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CSPI06G19380 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G19380
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionF-box/kelch-repeat protein
Genome locationChr6:17511456..17511811
RNA-Seq ExpressionCSPI06G19380
SyntenyCSPI06G19380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064737.1 F-box/kelch-repeat protein [Cucumis melo var. makuwa]1.8e-3293.42Show/hide
Query:  GILTMHRGRDSPIKLQNITHTATSSKHKREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL
        GILTMHRGRD+P KLQNITHTA SSK KREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGY EFL
Subjt:  GILTMHRGRDSPIKLQNITHTATSSKHKREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL

KAE8647234.1 hypothetical protein Csa_019002, partial [Cucumis sativus]8.8e-4098.81Show/hide
Query:  MASSMALTGILTMHRGRDSPIKLQNITHTATSSKHKREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL
        +ASSMALTGILTMHRGRDSPIKLQNITHTATSSKHKREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL
Subjt:  MASSMALTGILTMHRGRDSPIKLQNITHTATSSKHKREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL

KAG2702702.1 hypothetical protein I3760_06G102300 [Carya illinoinensis]2.8e-1762.2Show/hide
Query:  MALTGILTMHRGRDSPIKLQNITHTATSSKH--KREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL
        MAL+ I  M  GR++ + L++I H  T   H   +  GM+FESDWTRH KSSAF A VIRSATSFM WSCRIPI EGYHEFL
Subjt:  MALTGILTMHRGRDSPIKLQNITHTATSSKH--KREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL

KAG6585216.1 hypothetical protein SDJN03_17949, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2982.35Show/hide
Query:  MASSMALTGILTMHRGRDSPIKLQNITHTATSSKHKREF-GMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL
        +ASSMALTGIL MHR R + IKLQ+ITHTA SSK+ REF GMDFESDWTRH KSSAFAA VIRSATSFM WSCRIPIS+GYHEFL
Subjt:  MASSMALTGILTMHRGRDSPIKLQNITHTATSSKHKREF-GMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL

KAG7020136.1 hypothetical protein SDJN02_16818 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-2982.35Show/hide
Query:  MASSMALTGILTMHRGRDSPIKLQNITHTATSSKHKREF-GMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL
        +ASSMALTGIL MHR R + IKLQ+ITHTA SSK+ REF GMDFESDWTRH KSSAFAA VIRSATSFM WSCRIPIS+GYHEFL
Subjt:  MASSMALTGILTMHRGRDSPIKLQNITHTATSSKHKREF-GMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL

TrEMBL top hitse value%identityAlignment
A0A0A0KD56 Uncharacterized protein4.3e-4098.81Show/hide
Query:  MASSMALTGILTMHRGRDSPIKLQNITHTATSSKHKREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL
        +ASSMALTGILTMHRGRDSPIKLQNITHTATSSKHKREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL
Subjt:  MASSMALTGILTMHRGRDSPIKLQNITHTATSSKHKREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL

A0A444WZZ5 Uncharacterized protein7.6e-1352.87Show/hide
Query:  MASSMALTGILTMHRGRDSPIKLQNITHT-ATSSKH--KREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL
        + SSMA T +  M +G      L+N + T    S H   R   M+FESDWT+H KSSA+ A VIRSATS + WSCR+PI EGYHEFL
Subjt:  MASSMALTGILTMHRGRDSPIKLQNITHT-ATSSKH--KREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL

A0A5A7VCL2 F-box/kelch-repeat protein8.6e-3393.42Show/hide
Query:  GILTMHRGRDSPIKLQNITHTATSSKHKREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL
        GILTMHRGRD+P KLQNITHTA SSK KREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGY EFL
Subjt:  GILTMHRGRDSPIKLQNITHTATSSKHKREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL

A0A5J5ASN4 Uncharacterized protein3.0e-1761.36Show/hide
Query:  MASSMALTGILTMHRGRDSPIKLQ-NITHTATSSKH---KREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL
        M+S MAL     M  GR++  KL+ +IT   T+ K+    R  GMDFESDWT+H KSSAF A VIRSATSFM WSC+IPISEGYHEFL
Subjt:  MASSMALTGILTMHRGRDSPIKLQ-NITHTATSSKH---KREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL

A0A5J5AWB6 Uncharacterized protein1.5e-1660.23Show/hide
Query:  MASSMALTGILTMHRGRDSPIKLQ-NITHTATSSKH---KREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL
        M+SSMAL     M  GR++  KL+ +IT   T+ K+    R   MDFESDWT+H KSSAF A VIRSATSFM WSC+IPI EGYHEFL
Subjt:  MASSMALTGILTMHRGRDSPIKLQ-NITHTATSSKH---KREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCTATGGCATTGACTGGTATTTTGACAATGCATAGAGGAAGAGATAGCCCTATAAAGTTGCAGAACATCACTCATACAGCAACATCTAGTAAACATAAACG
TGAATTTGGTATGGACTTTGAATCAGACTGGACAAGACACGTTAAGTCTTCTGCATTTGCTGCTCCAGTGATCCGTTCTGCAACTTCGTTTATGCGTTGGTCTTGCAGAA
TCCCAATTAGTGAAGGATATCATGAATTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCTATGGCATTGACTGGTATTTTGACAATGCATAGAGGAAGAGATAGCCCTATAAAGTTGCAGAACATCACTCATACAGCAACATCTAGTAAACATAAACG
TGAATTTGGTATGGACTTTGAATCAGACTGGACAAGACACGTTAAGTCTTCTGCATTTGCTGCTCCAGTGATCCGTTCTGCAACTTCGTTTATGCGTTGGTCTTGCAGAA
TCCCAATTAGTGAAGGATATCATGAATTTCTTTAA
Protein sequenceShow/hide protein sequence
MASSMALTGILTMHRGRDSPIKLQNITHTATSSKHKREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL