; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G19520 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G19520
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionclp protease adapter protein ClpF, chloroplastic
Genome locationChr6:17601570..17604925
RNA-Seq ExpressionCSPI06G19520
SyntenyCSPI06G19520
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009840 - chloroplastic endopeptidase Clp complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR001943 - UVR domain
IPR011722 - Hemimethylated DNA-binding domain
IPR036623 - Hemimethylated DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064751.1 UvrB/uvrC motif-containing protein isoform 1 [Cucumis melo var. makuwa]1.2e-18096.45Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
        MVQDLSIHAMTALGDPNVYGSALSWRRN KYFKQTSLTQLTSRQCFWHQCMRSFSLTSQP RSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAE+IKQQESKKGLTSKSEVQDKGLNIIRLRADLQKA+ESENYALAAQLRDEISKLET+SLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL+PEEPDTERFDHPYSSFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPF--EDDEQQGDD
        GVDSAGDFIPIKQLREKYNRPRHE+PF  +DDEQQGDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPF--EDDEQQGDD

KAG7029563.1 Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-16087.35Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTS-LTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILI
        MVQDLSIHA+TALGDP VYGS LSWR+N   FKQTS  T LTSRQ FWHQ MRSFSL SQP RSKRG+FK++AGWLF+GGGQ    RIERSENANNDILI
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTS-LTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILI

Query:  FFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKV
        FFFQLDLATRVQYALNIEQYEIAQELR KLTEVE EVIKQQESK+GLTSKSEVQDKGL+IIRLRADLQKA+ESENY  AAQLRD+ISKLET+SLAASAKV
Subjt:  FFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKV

Query:  LAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLF
        LAYESAEYSFRLGQK RHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLL PEEPDTERFDHPY+SFLF
Subjt:  LAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLF

Query:  YGVDSAGDFIPIKQLREKYNRPRHEVPF---EDDEQQGDD
        YGVDSAGDFIP+KQLREKYNRPRHEVP+   +DDEQ+GDD
Subjt:  YGVDSAGDFIPIKQLREKYNRPRHEVPF---EDDEQQGDD

XP_004144184.1 clp protease adapter protein ClpF, chloroplastic isoform X1 [Cucumis sativus]1.6e-18599.4Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
        MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL+PEEPDTERFDHPYSSFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPFEDDEQQGDD
        GVDSAGDFIPIKQLREKYNRPR+EVPFEDDEQQGDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPFEDDEQQGDD

XP_008445473.1 PREDICTED: uncharacterized protein LOC103488481 [Cucumis melo]9.1e-18196.75Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
        MVQDLSIHAMTALGDPNVYGSALSWRRN KYFKQTSLTQLTSRQCFWHQCMRSFSLTSQP RSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAE+IKQQESKKGLTSKSEVQDKGLNIIRLRADLQKA+ESENYALAAQLRDEISKLET+SLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL+PEEPDTERFDHPYSSFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPF--EDDEQQGDD
        GVDSAGDFIPIKQLREKYNRPRHEVPF  +DDEQQGDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPF--EDDEQQGDD

XP_038886599.1 clp protease adapter protein ClpF, chloroplastic [Benincasa hispida]9.1e-17392.31Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
        MVQDLSIHA+TALGDP VYGSALSWRRNFK+FKQTSLTQLTSRQCFW+QCMRSFSLTSQP   KRG+FK++AGWLFKGGGQE GGRIERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAE+IKQQESK+GLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLET+SLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGYRGV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL PEEPD E FDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPF--EDDEQQGDD
        GVD+AGDFIPIKQLREKYNRPR+EVPF  +DDEQ+GDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPF--EDDEQQGDD

TrEMBL top hitse value%identityAlignment
A0A0A0KD67 YccV-like domain-containing protein7.8e-18699.4Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
        MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL+PEEPDTERFDHPYSSFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPFEDDEQQGDD
        GVDSAGDFIPIKQLREKYNRPR+EVPFEDDEQQGDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPFEDDEQQGDD

A0A1S3BCC1 uncharacterized protein LOC1034884814.4e-18196.75Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
        MVQDLSIHAMTALGDPNVYGSALSWRRN KYFKQTSLTQLTSRQCFWHQCMRSFSLTSQP RSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAE+IKQQESKKGLTSKSEVQDKGLNIIRLRADLQKA+ESENYALAAQLRDEISKLET+SLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL+PEEPDTERFDHPYSSFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPF--EDDEQQGDD
        GVDSAGDFIPIKQLREKYNRPRHEVPF  +DDEQQGDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPF--EDDEQQGDD

A0A5A7VGB7 UvrB/uvrC motif-containing protein isoform 15.8e-18196.45Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
        MVQDLSIHAMTALGDPNVYGSALSWRRN KYFKQTSLTQLTSRQCFWHQCMRSFSLTSQP RSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAE+IKQQESKKGLTSKSEVQDKGLNIIRLRADLQKA+ESENYALAAQLRDEISKLET+SLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY
        AYESAEYSFRLGQKVRHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL+PEEPDTERFDHPYSSFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPF--EDDEQQGDD
        GVDSAGDFIPIKQLREKYNRPRHE+PF  +DDEQQGDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPF--EDDEQQGDD

A0A6J1HFJ3 clp protease adapter protein ClpF, chloroplastic5.6e-16087.06Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTS-LTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILI
        MVQDLSIHA+TALGDP VYGS LSWR+N   FKQTS  T LTSRQ FWHQ MRSFSL SQP R KRG+FK++AGWLF+GGGQ    RIERSENANNDILI
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTS-LTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILI

Query:  FFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKV
        FFFQLDLATRVQYALNIEQYEIAQELR KLTEVE EVIKQQESK+GLTSKSEVQDKGL+IIRLRADLQKA+ESENY  AAQLRD+ISKLET+SLAASAKV
Subjt:  FFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKV

Query:  LAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLF
        LAYESAEYSFRLGQK RHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLL PEEPDTERFDHPY+SFLF
Subjt:  LAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLF

Query:  YGVDSAGDFIPIKQLREKYNRPRHEVPF---EDDEQQGDD
        YGVDSAGDFIP+KQLREKYNRPRHEVP+   +DDEQ+GDD
Subjt:  YGVDSAGDFIPIKQLREKYNRPRHEVPF---EDDEQQGDD

A0A6J1KAU5 clp protease adapter protein ClpF, chloroplastic isoform X21.9e-16086.14Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF
        MVQDLSIH++T+LGDP VYGS LSWR N   FKQTS T LTSRQ FWHQ MRSFSL SQP RSKRG+FK++AGWLF+GGGQ    RIERSENANNDILIF
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEVIKQQESK+GLTSKSEVQDKGL+IIRLRADLQKA+ESENY  AAQLRD+ISKLET+SLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVL

Query:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY
        AYESAEY+FRLGQK +HKIFGYRGVICGMDPVCCE+SSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYVAEENLL PEEPDTERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFY

Query:  GVDSAGDFIPIKQLREKYNRPRHEVPF---EDDEQQGDD
        GVD+AGDFIP++QLREKYNRPRHEVP+   +DDEQ+GDD
Subjt:  GVDSAGDFIPIKQLREKYNRPRHEVPF---EDDEQQGDD

SwissProt top hitse value%identityAlignment
O94952 F-box only protein 212.5e-0832.73Show/hide
Query:  FRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFYGVDSAGDF
        + +G  ++HK +GY  VI G DP C     W+    V  L  G +QPFY VLV+     D    Y A+ENL    EP  +   HP     ++   +   +
Subjt:  FRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFYGVDSAGDF

Query:  IPIKQLREKY
        IP  +L  +Y
Subjt:  IPIKQLREKY

Q5R5S1 F-box only protein 212.5e-0832.73Show/hide
Query:  FRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFYGVDSAGDF
        + +G  ++HK +GY  VI G DP C     W+    V  L  G +QPFY VLV+     D    Y A+ENL    EP  +   HP     ++   +   +
Subjt:  FRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFYGVDSAGDF

Query:  IPIKQLREKY
        IP  +L  +Y
Subjt:  IPIKQLREKY

Q67Y99 Clp protease adapter protein ClpF, chloroplastic6.1e-11164.18Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMR-SFSLTSQPRRSK-RGSFKIRAGWLFKGGGQES-GGRIERSENANNDI
        MVQ  S+  +T  G   V  S L  R N         + L   +C   Q +R S S  S  +  K R   ++ A W F+GGG++      ERSE+AN DI
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMR-SFSLTSQPRRSK-RGSFKIRAGWLFKGGGQES-GGRIERSENANNDI

Query:  LIFFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASA
        LIFFFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVE E I+ QE K+G ++KSE QDKG++IIRLRADLQ A++SE+Y LAA+LRDEISKLE +SLA SA
Subjt:  LIFFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASA

Query:  KVLAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSF
        K LA+E AEY+FRLGQK+RHK FGYR V+CGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYVAE+NLL+PE+PD ERFDHPY SF
Subjt:  KVLAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSF

Query:  LFYGVDSAGDFIPIKQLREKYNRPRHEVPFEDDEQ
        L+YG D+AGDFIP+KQLREKYNRPRHEVPF+  ++
Subjt:  LFYGVDSAGDFIPIKQLREKYNRPRHEVPFEDDEQ

Q8D251 Heat shock protein HspQ4.9e-0436.78Show/hide
Query:  FRLGQKVRHKIFGYRGVICGMDP-VCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENL---LSPEEPDTERFD
        F +GQ+VRHK+ GY GVI  +DP    E  S  EI+  + L R    P+Y V+++   D   +  Y+AE  L   +SP  P+  + D
Subjt:  FRLGQKVRHKIFGYRGVICGMDP-VCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENL---LSPEEPDTERFD

Q8VDH1 F-box only protein 211.9e-0832.73Show/hide
Query:  FRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFYGVDSAGDF
        + +G  ++HK +GY  VI G DP C     W+    V  L  G +QPFY VLV+     D    Y A+ENL    EP  +   HP     ++   +   +
Subjt:  FRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFYGVDSAGDF

Query:  IPIKQLREKY
        IP  +L  +Y
Subjt:  IPIKQLREKY

Arabidopsis top hitse value%identityAlignment
AT2G03390.1 uvrB/uvrC motif-containing protein4.3e-11264.18Show/hide
Query:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMR-SFSLTSQPRRSK-RGSFKIRAGWLFKGGGQES-GGRIERSENANNDI
        MVQ  S+  +T  G   V  S L  R N         + L   +C   Q +R S S  S  +  K R   ++ A W F+GGG++      ERSE+AN DI
Subjt:  MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMR-SFSLTSQPRRSK-RGSFKIRAGWLFKGGGQES-GGRIERSENANNDI

Query:  LIFFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASA
        LIFFFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVE E I+ QE K+G ++KSE QDKG++IIRLRADLQ A++SE+Y LAA+LRDEISKLE +SLA SA
Subjt:  LIFFFQLDLATRVQYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASA

Query:  KVLAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSF
        K LA+E AEY+FRLGQK+RHK FGYR V+CGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYVAE+NLL+PE+PD ERFDHPY SF
Subjt:  KVLAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSF

Query:  LFYGVDSAGDFIPIKQLREKYNRPRHEVPFEDDEQ
        L+YG D+AGDFIP+KQLREKYNRPRHEVPF+  ++
Subjt:  LFYGVDSAGDFIPIKQLREKYNRPRHEVPFEDDEQ

AT2G03390.2 uvrB/uvrC motif-containing protein4.0e-9475.34Show/hide
Query:  LNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVLAYESAEYSFRLGQ
        +N+EQY+IAQ+LR KLTEVE E I+ QE K+G ++KSE QDKG++IIRLRADLQ A++SE+Y LAA+LRDEISKLE +SLA SAK LA+E AEY+FRLGQ
Subjt:  LNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVLAYESAEYSFRLGQ

Query:  KVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFYGVDSAGDFIPIKQ
        K+RHK FGYR V+CGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYVAE+NLL+PE+PD ERFDHPY SFL+YG D+AGDFIP+KQ
Subjt:  KVRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFYGVDSAGDFIPIKQ

Query:  LREKYNRPRHEVPFEDDEQ
        LREKYNRPRHEVPF+  ++
Subjt:  LREKYNRPRHEVPFEDDEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAAGATTTGTCAATTCACGCTATGACAGCCTTGGGAGATCCAAATGTTTATGGATCAGCTCTTTCATGGAGGAGGAATTTCAAGTATTTCAAGCAGACAAGTCT
AACCCAATTAACTTCCAGGCAATGCTTTTGGCATCAATGCATGCGCAGCTTTTCCTTAACTAGCCAACCCCGTAGATCGAAACGAGGAAGTTTTAAGATCAGAGCTGGAT
GGTTGTTTAAAGGAGGTGGACAAGAGTCAGGTGGTCGTATAGAGCGCAGTGAAAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGTA
CAGTATGCATTGAACATTGAGCAGTATGAAATTGCACAAGAATTGAGGATGAAGCTAACCGAGGTTGAAGCAGAAGTCATCAAGCAGCAAGAATCGAAAAAGGGGTTAAC
TTCAAAGAGCGAAGTTCAAGACAAAGGTTTAAATATCATTCGTTTACGCGCAGATTTGCAGAAGGCTGTTGAAAGTGAAAATTATGCTTTGGCTGCACAACTGCGGGATG
AAATTTCAAAATTGGAAACTGATTCCCTAGCTGCATCAGCAAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTAGATTGGGACAGAAAGTGAGGCACAAAATTTTT
GGATACAGAGGTGTGATTTGTGGAATGGATCCTGTGTGCTGTGAATCAAGTTCTTGGATGGAGATAGCACAAGTTGAAAAATTATCTCGTGGTTCTAATCAGCCATTTTA
TCAGGTTTTAGTAGATGTTCGTACAGACCCAGATTTACTGGTTGCATATGTTGCCGAGGAAAATCTTCTTTCTCCCGAAGAACCAGATACGGAGAGGTTCGACCATCCGT
ATAGTTCCTTCTTATTCTATGGAGTGGATTCAGCCGGGGATTTCATTCCTATAAAGCAACTGCGAGAGAAGTACAATCGGCCTCGACACGAAGTTCCTTTTGAGGATGAT
GAGCAACAGGGTGACGATTGA
mRNA sequenceShow/hide mRNA sequence
GTCGTGGTTGCAAACAAAATTGATTCTCGTCGCTTCTCTGGCAGCTCTCAGATGCGAAGATCTTTAATTGAGAGGTAGAGGAAGAAGGATACAATTTTATTCTTCAATCA
GAGGAAAGTATCTGCCTTTTTAGCAGAAATAATGGTGCAAGATTTGTCAATTCACGCTATGACAGCCTTGGGAGATCCAAATGTTTATGGATCAGCTCTTTCATGGAGGA
GGAATTTCAAGTATTTCAAGCAGACAAGTCTAACCCAATTAACTTCCAGGCAATGCTTTTGGCATCAATGCATGCGCAGCTTTTCCTTAACTAGCCAACCCCGTAGATCG
AAACGAGGAAGTTTTAAGATCAGAGCTGGATGGTTGTTTAAAGGAGGTGGACAAGAGTCAGGTGGTCGTATAGAGCGCAGTGAAAATGCTAACAATGATATTTTAATCTT
CTTTTTCCAGCTGGACCTGGCAACACGAGTACAGTATGCATTGAACATTGAGCAGTATGAAATTGCACAAGAATTGAGGATGAAGCTAACCGAGGTTGAAGCAGAAGTCA
TCAAGCAGCAAGAATCGAAAAAGGGGTTAACTTCAAAGAGCGAAGTTCAAGACAAAGGTTTAAATATCATTCGTTTACGCGCAGATTTGCAGAAGGCTGTTGAAAGTGAA
AATTATGCTTTGGCTGCACAACTGCGGGATGAAATTTCAAAATTGGAAACTGATTCCCTAGCTGCATCAGCAAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTAG
ATTGGGACAGAAAGTGAGGCACAAAATTTTTGGATACAGAGGTGTGATTTGTGGAATGGATCCTGTGTGCTGTGAATCAAGTTCTTGGATGGAGATAGCACAAGTTGAAA
AATTATCTCGTGGTTCTAATCAGCCATTTTATCAGGTTTTAGTAGATGTTCGTACAGACCCAGATTTACTGGTTGCATATGTTGCCGAGGAAAATCTTCTTTCTCCCGAA
GAACCAGATACGGAGAGGTTCGACCATCCGTATAGTTCCTTCTTATTCTATGGAGTGGATTCAGCCGGGGATTTCATTCCTATAAAGCAACTGCGAGAGAAGTACAATCG
GCCTCGACACGAAGTTCCTTTTGAGGATGATGAGCAACAGGGTGACGATTGATTGACACACGTCTTTAGAAATCCCTCATTCTCAACACCTTTCCAAAATGGTTTGTTCA
TCTCATTCATTGATTTTCAAGAGACTTCATGTAAGTTGATAATTGAAAATTCTGAATCAATGTTGTACATATAGACATAGCATCTCATAAACTTCTTCTTGTTGCTTTCG
AA
Protein sequenceShow/hide protein sequence
MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQPRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIFFFQLDLATRV
QYALNIEQYEIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVLAYESAEYSFRLGQKVRHKIF
GYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLSPEEPDTERFDHPYSSFLFYGVDSAGDFIPIKQLREKYNRPRHEVPFEDD
EQQGDD