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CSPI06G19710 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G19710
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein SPIRAL1-like 1
Genome locationChr6:17720534..17722835
RNA-Seq ExpressionCSPI06G19710
SyntenyCSPI06G19710
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144171.1 protein SPIRAL1-like 1 [Cucumis sativus]4.3e-5699.17Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKT+SKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGGAGGK
        HAAPGGGSSLDYLFGGAGGK
Subjt:  HAAPGGGSSLDYLFGGAGGK

XP_008445444.1 PREDICTED: protein SPIRAL1-like 1 [Cucumis melo]4.0e-5496.67Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KTVSKPAVSKPAATASPPADI+KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGGAGGK
        HAAPGGGSSLDYLFGGAGGK
Subjt:  HAAPGGGSSLDYLFGGAGGK

XP_022961880.1 protein SPIRAL1-like 2 [Cucurbita moschata]2.4e-4688.98Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PP +E K VSKPA SKPAATASPPAD +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGGAGGK
        APGGGSSLDYLFGGAGGK
Subjt:  APGGGSSLDYLFGGAGGK

XP_023537697.1 protein SPIRAL1-like 1 [Cucurbita pepo subsp. pepo]1.7e-4481.25Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPP----------SEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFI
        GRGVSSGGGQSSLGYLFG G++PNAGAPKGG+   P P          +EAK VSKPA SKPAATASPP D  KQIPAGIHSSSSNNYLRADGQNTGNFI
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPP----------SEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFI

Query:  TDRPSTKVHAAPGGGSSLDYLFGGAGGK
        TDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  TDRPSTKVHAAPGGGSSLDYLFGGAGGK

XP_038886245.1 protein SPIRAL1-like 1 [Benincasa hispida]8.9e-5495.83Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KTVSKPAVSKPAATASPPAD++KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGGAGGK
        HAAPGGGSSLDYLFGGAGGK
Subjt:  HAAPGGGSSLDYLFGGAGGK

TrEMBL top hitse value%identityAlignment
A0A0A0KFN2 Uncharacterized protein2.1e-5699.17Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKT+SKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGGAGGK
        HAAPGGGSSLDYLFGGAGGK
Subjt:  HAAPGGGSSLDYLFGGAGGK

A0A1S3BCR3 protein SPIRAL1-like 11.9e-5496.67Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KTVSKPAVSKPAATASPPADI+KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGGAGGK
        HAAPGGGSSLDYLFGGAGGK
Subjt:  HAAPGGGSSLDYLFGGAGGK

A0A5A7VC71 Protein SPIRAL1-like 11.9e-5496.67Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KTVSKPAVSKPAATASPPADI+KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGGAGGK
        HAAPGGGSSLDYLFGGAGGK
Subjt:  HAAPGGGSSLDYLFGGAGGK

A0A6J1HDG7 protein SPIRAL1-like 21.1e-4688.98Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PP +E K VSKPA SKPAATASPPAD +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGGAGGK
        APGGGSSLDYLFGGAGGK
Subjt:  APGGGSSLDYLFGGAGGK

A0A6J1K972 protein SPIRAL1-like 21.1e-4688.98Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PP +E K VSKPA SKPAATASPPAD +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGGAGGK
        APGGGSSLDYLFGGAGGK
Subjt:  APGGGSSLDYLFGGAGGK

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 11.9e-3065.52Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVS GGGQSSLGYLFG G+AP          AP P SE   +S  A   P   A+   +++KQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHA
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGGAG
        APGGGSSLDYLFGG G
Subjt:  APGGGSSLDYLFGGAG

Q2QQ99 Protein SPIRAL1-like 32.2e-2662.61Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPA-VSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVH
        GRGVSSGGGQSSLGYLFG G+AP                  K+  KPA V KPA ++S  A+  K+IPAGI SS +NNY+RA+GQN GNF+TDRPSTKV 
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPA-VSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVH

Query:  AAPGGGSSLDYLFGG
        AAPGGGSSLDYLF G
Subjt:  AAPGGGSSLDYLFGG

Q2R0W8 Protein SPIRAL1-like 23.1e-2560.34Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPP--ADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        GRGVSSGGGQSSLGYLFG G+   A   K     P   +E +T   P      A A+ P  A+  K+IPAGI S+ +NNY RA GQN GNF+TDRPSTKV
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPP--ADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGG
        HAAPGGGSSL YLFGG
Subjt:  HAAPGGGSSLDYLFGG

Q7Y1L9 Protein SPIRAL1-like 12.2e-2665.52Show/hide
Query:  RGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAP-PPPSEAKTVSKPAVSKPAATASP-PADISKQIPAGIHSS-SSNNYLRADGQNTGNFITDRPSTKV
        RG S+GGGQSSLGYLFG  +AP   A      AP P P+ A      AV+ PA   SP  AD +KQIPAGI  S S+NNY RADGQNTGNF+TDRPSTKV
Subjt:  RGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAP-PPPSEAKTVSKPAVSKPAATASP-PADISKQIPAGIHSS-SSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGG
        HAAPGGGSSL YLFGG
Subjt:  HAAPGGGSSLDYLFGG

Q9LE54 Protein SPIRAL1-like 21.1e-2761.4Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVS+GGGQSSLGYLFG G+AP   A           + A+T S        A A+   D  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGG
        APGGGSSLDYLFGG
Subjt:  APGGGSSLDYLFGG

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like11.3e-3165.52Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVS GGGQSSLGYLFG G+AP          AP P SE   +S  A   P   A+   +++KQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHA
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGGAG
        APGGGSSLDYLFGG G
Subjt:  APGGGSSLDYLFGGAG

AT1G69230.1 SPIRAL1-like28.1e-2961.4Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVS+GGGQSSLGYLFG G+AP   A           + A+T S        A A+   D  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGG
        APGGGSSLDYLFGG
Subjt:  APGGGSSLDYLFGG

AT1G69230.2 SPIRAL1-like28.1e-2961.4Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVS+GGGQSSLGYLFG G+AP   A           + A+T S        A A+   D  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGG
        APGGGSSLDYLFGG
Subjt:  APGGGSSLDYLFGG

AT2G03680.1 spiral15.5e-2561.16Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATA-------SPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDR
        GRG S GGGQSSL YLFG GDAP   APK      P P+E+     P V+   ATA         PA+++KQIPAGI  +  NNY RA+GQNTGNF+TDR
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATA-------SPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDR

Query:  PSTKVHAAPGGGSSLDYLFGG
        PSTKVHAAPGGGSSLDYLF G
Subjt:  PSTKVHAAPGGGSSLDYLFGG

AT2G03680.2 spiral15.5e-2561.16Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATA-------SPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDR
        GRG S GGGQSSL YLFG GDAP   APK      P P+E+     P V+   ATA         PA+++KQIPAGI  +  NNY RA+GQNTGNF+TDR
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATA-------SPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDR

Query:  PSTKVHAAPGGGSSLDYLFGG
        PSTKVHAAPGGGSSLDYLF G
Subjt:  PSTKVHAAPGGGSSLDYLFGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCAAAAGGTGGCCGCCAAGCACC
GCCGCCTCCAAGTGAAGCGAAGACTGTATCCAAACCAGCAGTGTCTAAACCTGCTGCTACTGCTTCACCACCTGCAGATATTTCCAAGCAGATTCCAGCTGGTATTCACA
GTAGCTCATCAAACAACTATTTGAGGGCAGACGGTCAAAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTTCACGCCGCCCCGGGCGGGGGATCTTCTCTG
GATTATCTGTTTGGTGGTGCTGGTGGAAAATGA
mRNA sequenceShow/hide mRNA sequence
TCAGATCCCATCGTCGCCGGAAGGTTTGCTCCTCAAATTCATTCCTTGTCTCTTAGATCTTCTCTTTATCTTTCTTTTTTCCTCTTTTTAATCCACAATCTACCTTTGTT
TTCCCCCCCATTTTCTTCTTCCTTCATCATCTACCATTGTTTTATCGCATTCCTTCTCTAGATCTACTACTTGATTCATTCTCTTTGGATTTCCTGTTTCTCCTTCCGGG
CAAGCTTCTGAGTTGTGACATTTCAAAGAAACCGAAGTGCCATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGTGATGGAGAT
GCTCCTAATGCAGGTGCACCAAAAGGTGGCCGCCAAGCACCGCCGCCTCCAAGTGAAGCGAAGACTGTATCCAAACCAGCAGTGTCTAAACCTGCTGCTACTGCTTCACC
ACCTGCAGATATTTCCAAGCAGATTCCAGCTGGTATTCACAGTAGCTCATCAAACAACTATTTGAGGGCAGACGGTCAAAACACTGGCAATTTCATAACGGATCGGCCTT
CAACCAAGGTTCACGCCGCCCCGGGCGGGGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGAAACCTGCAAATCAGAACTAAATAGAGCTATTTGACG
ATCCATTTTATGTGAATTTTTATATCGTGTCGAAGGGGCAATGTTTTTTTTTCTTCTTTTCTTCCATCTGAAACGATACTATGGCAGGACGATATGCTTTTCGATGTAAT
GTGTAGATGCTTATGGTTTC
Protein sequenceShow/hide protein sequence
MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTVSKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSL
DYLFGGAGGK