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CSPI06G19730 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G19730
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptioncytochrome b5
Genome locationChr6:17729616..17732230
RNA-Seq ExpressionCSPI06G19730
SyntenyCSPI06G19730
Gene Ontology termsGO:0009707 - chloroplast outer membrane (cellular component)
GO:0010319 - stromule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001199 - Cytochrome b5-like heme/steroid binding domain
IPR018506 - Cytochrome b5, heme-binding site
IPR036400 - Cytochrome b5-like heme/steroid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064772.1 cytochrome b5 [Cucumis melo var. makuwa]1.6e-5694.92Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT
        MPSISALYSIQEVSQHSS+DDCWIIIDGKVYDLTSYLDEHPGGDD+IV ATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSS DSLKLETNQVD YAT
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT

Query:  RVQTLTKQYWKAPVAVIG
         VQTLTKQYWKAPVAVIG
Subjt:  RVQTLTKQYWKAPVAVIG

KAG6598642.1 Cytochrome b5 isoform A, partial [Cucurbita argyrosperma subsp. sororia]5.5e-5786.26Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT
        MPSISALYSI+EVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIG LD SS    +LET + DGYA 
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT

Query:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK
        RVQTLTKQYW  P+AV+GISVVLGW YL KK
Subjt:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK

XP_004144166.1 cytochrome b5 [Cucumis sativus]9.1e-68100Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT
        MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT

Query:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK
        RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK
Subjt:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK

XP_008445442.1 PREDICTED: cytochrome b5 [Cucumis melo]2.1e-6494.66Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT
        MPSISALYSIQEVSQHSS+DDCWIIIDGKVYDLTSYLDEHPGGDD+IV ATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSS DSLKLETNQVD YAT
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT

Query:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK
        RVQTLTKQYWKAPVAVIGIS+VLGW YLRKK
Subjt:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK

XP_038884358.1 cytochrome b5 [Benincasa hispida]4.4e-6293.13Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT
        MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIG+LDTSS DSLKLET+QVDGYA 
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT

Query:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK
        RVQ  TKQYWKAPVAV+GISVVLG  YLRKK
Subjt:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK

TrEMBL top hitse value%identityAlignment
A0A0A0KIR1 Cytochrome b5 heme-binding domain-containing protein4.4e-68100Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT
        MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT

Query:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK
        RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK
Subjt:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK

A0A1S3BCR4 cytochrome b51.0e-6494.66Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT
        MPSISALYSIQEVSQHSS+DDCWIIIDGKVYDLTSYLDEHPGGDD+IV ATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSS DSLKLETNQVD YAT
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT

Query:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK
        RVQTLTKQYWKAPVAVIGIS+VLGW YLRKK
Subjt:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK

A0A5A7V8T8 Cytochrome b57.8e-5794.92Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT
        MPSISALYSIQEVSQHSS+DDCWIIIDGKVYDLTSYLDEHPGGDD+IV ATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSS DSLKLETNQVD YAT
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT

Query:  RVQTLTKQYWKAPVAVIG
         VQTLTKQYWKAPVAVIG
Subjt:  RVQTLTKQYWKAPVAVIG

A0A6J1HFA7 cytochrome b51.3e-5685.5Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT
        MPSISALYSI+EVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIG LD SS    +LE  + DGYA 
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT

Query:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK
        RVQTLTKQYW  P+AV+GISVVLGW YL KK
Subjt:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK

A0A6J1KB15 cytochrome b57.3e-5581.68Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT
        MPSISALYSI+E+S+HSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVI+AATGRDATDDFEDAGHSKD RELM+KFYIG LD SS     LET + DGYA 
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT

Query:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK
        +VQTLTKQYW  P+AV+GISVVLGW YL KK
Subjt:  RVQTLTKQYWKAPVAVIGISVVLGWAYLRKK

SwissProt top hitse value%identityAlignment
O04354 Cytochrome b55.8e-2554.32Show/hide
Query:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDS
        ++++ EV+QH+++ DCW+II+GKVYD+T +L++HPGGDDV+++ATG+DATDDFED GHS  A+ +++++Y+G +D+SS+ S
Subjt:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDS

O48845 Cytochrome b5 isoform B5.8e-2541.18Show/hide
Query:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYATRVQT--
        ++++ EVS+H+   DCWI+I+GKVY++T +L++HPGGDDV++++TG+DATDDFED GHS+ ARE+ME++Y+G +D +++      T     +  + +T  
Subjt:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYATRVQT--

Query:  --LTKQYWKAPVAVIGISV
          +    +  P+A++G++V
Subjt:  --LTKQYWKAPVAVIGISV

P40934 Cytochrome b53.4e-2540.94Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT
        M S   +   +EVSQH+   DCW+II GKVYD+T ++D+HPGGD+V++++TG+DAT+DFED GHS  AR++MEK+YIG +D+S++ + +     V     
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYAT

Query:  RVQT----LTKQYWKAPVAVIGISVVL
        + +T    +    +  P+ ++G+++V+
Subjt:  RVQT----LTKQYWKAPVAVIGISVVL

Q9FDW8 Cytochrome b5 isoform A9.2e-3955.22Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLK----LETNQVD
        MP+++ LYS++E + H+  DDCW++IDGKVYD++SY+DEHPGGDDV++A  G+DATDDFEDAGHSKDARELMEK++IG LD SSL  +      + +Q  
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLK----LETNQVD

Query:  GYATRVQTLTKQYWKAPVAVIGISVVLGWAYLRK
            ++  LTKQYW  PV++I ISV +   + RK
Subjt:  GYATRVQTLTKQYWKAPVAVIGISVVLGWAYLRK

Q9ZWT2 Cytochrome B5 isoform D2.0e-2558.23Show/hide
Query:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSL
        ++++ EVSQHSS  DCWI+IDGKVYD+T +LD+HPGGD+VI+ +TG+DATDDFED GHS  A+ +++++Y+G +DT+++
Subjt:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSL

Arabidopsis top hitse value%identityAlignment
AT1G26340.1 cytochrome B5 isoform A6.5e-4055.22Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLK----LETNQVD
        MP+++ LYS++E + H+  DDCW++IDGKVYD++SY+DEHPGGDDV++A  G+DATDDFEDAGHSKDARELMEK++IG LD SSL  +      + +Q  
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLK----LETNQVD

Query:  GYATRVQTLTKQYWKAPVAVIGISVVLGWAYLRK
            ++  LTKQYW  PV++I ISV +   + RK
Subjt:  GYATRVQTLTKQYWKAPVAVIGISVVLGWAYLRK

AT2G32720.1 cytochrome B5 isoform B4.1e-2641.18Show/hide
Query:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYATRVQT--
        ++++ EVS+H+   DCWI+I+GKVY++T +L++HPGGDDV++++TG+DATDDFED GHS+ ARE+ME++Y+G +D +++      T     +  + +T  
Subjt:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYATRVQT--

Query:  --LTKQYWKAPVAVIGISV
          +    +  P+A++G++V
Subjt:  --LTKQYWKAPVAVIGISV

AT2G46650.1 cytochrome B5 isoform C1.1e-2340.65Show/hide
Query:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYATRVQTLT
        L S  +V++H   +DCWI+I GKVYD+++++DEHPGGD+V++A TG+DA+ DFED  HSKDA+ELM+K+ IG +D S++   +      +  +T  +T  
Subjt:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYATRVQTLT

Query:  KQYWK------APVAVIGISVVL
        ++  K       P+ ++G++  L
Subjt:  KQYWK------APVAVIGISVVL

AT5G48810.1 cytochrome B5 isoform D1.4e-2658.23Show/hide
Query:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSL
        ++++ EVSQHSS  DCWI+IDGKVYD+T +LD+HPGGD+VI+ +TG+DATDDFED GHS  A+ +++++Y+G +DT+++
Subjt:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSL

AT5G53560.1 cytochrome B5 isoform E2.7e-2551.69Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLK
        M S   + S +EVS+H+   DCW+II GKVYD+T ++D+HPGGD+V++++TG+DAT+DFED GHS  AR++M+K++IG +D+SS+ + +
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAGCATTTCGGCCCTCTATTCCATTCAAGAAGTCTCACAGCACAGTTCCAACGACGACTGTTGGATCATTATCGATGGCAAGGTATACGATTTAACTTCATATTT
GGATGAGCATCCTGGTGGAGATGATGTTATTGTGGCTGCAACTGGCAGAGATGCCACGGATGATTTTGAAGATGCTGGTCATAGCAAAGATGCCAGGGAGTTGATGGAGA
AGTTCTATATCGGCTTGCTTGATACATCTTCCTTGGATAGCCTAAAACTTGAAACAAATCAAGTAGACGGTTATGCAACTCGGGTTCAGACCTTGACAAAGCAATACTGG
AAGGCCCCTGTTGCAGTAATTGGTATTTCTGTGGTACTTGGTTGGGCATACTTGCGCAAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
CATAAATAAAAATATATATGTTTTCTTTTGTTCATCATGATACTCACATTTTTTGTTGGGCTTTTTGTTGCTTTAGTAAATACTCCTATGGCCCAACGAAGGAATGGATG
AGGCCCAAAGCCCACCAAGAAGTTCGATATTTCGAGGGCCAGTTCTTCAAAAAAGAAAAGAAAAAGAAAAAAAATCCGATCGTGGTCGAACCAACCCGCGGCGGCGATTA
GTCGACCAATCGCCAAAAGGGATCGATGCCGAGCATTTCGGCCCTCTATTCCATTCAAGAAGTCTCACAGCACAGTTCCAACGACGACTGTTGGATCATTATCGATGGCA
AGGTATACGATTTAACTTCATATTTGGATGAGCATCCTGGTGGAGATGATGTTATTGTGGCTGCAACTGGCAGAGATGCCACGGATGATTTTGAAGATGCTGGTCATAGC
AAAGATGCCAGGGAGTTGATGGAGAAGTTCTATATCGGCTTGCTTGATACATCTTCCTTGGATAGCCTAAAACTTGAAACAAATCAAGTAGACGGTTATGCAACTCGGGT
TCAGACCTTGACAAAGCAATACTGGAAGGCCCCTGTTGCAGTAATTGGTATTTCTGTGGTACTTGGTTGGGCATACTTGCGCAAAAAGTGATTCCTGTGCCAATTAAAGG
CTGTTGGCTTGTTGAGTTGAGAGAGTTGGTCTCATTTTTGCTTCTTGAAAAACTTCATATTCGTTTCAATATATTCATACAATGATTGTGGTAGGTTCTTTGTTCCTTAG
TAGTACTGTAGAAAGGATTATTTTCTTGTTAATTGGTAGGTTTGTTTATTTGTTTCCATAGTTTCATTAGATGGGAGTTGGGAAAATGGTTCGGGTTCAATGGAGTTTGA
TCCAACTCCATTGCCTCTTTTTGACCAAACTATATATACTGTTCTCTACATGCAGCAGTTCTTAAATTTTGAGCCTGAAGACATGTGACATCTTATACTTCTACAAGAGA
ATCAAACAATCCAATGAGACTAA
Protein sequenceShow/hide protein sequence
MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSLDSLKLETNQVDGYATRVQTLTKQYW
KAPVAVIGISVVLGWAYLRKK