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CSPI06G19930 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G19930
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:17874725..17875010
RNA-Seq ExpressionCSPI06G19930
SyntenyCSPI06G19930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647260.1 hypothetical protein Csa_018328, partial [Cucumis sativus]9.5e-39100Show/hide
Query:  MHCTLLPHHNRVSDLPPDKPVAAFRSPVIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKPISKD
        MHCTLLPHHNRVSDLPPDKPVAAFRSPVIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKPISKD
Subjt:  MHCTLLPHHNRVSDLPPDKPVAAFRSPVIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKPISKD

KAG6602131.1 hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0853.52Show/hide
Query:  VSDLPPDKPVAAFRSP-VIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKPISKD
        V  L P  P  A  S   +  R G  K+KSVIPK+RKLVKTM+YH +K+F+ SLFR     HNRPKPI+ D
Subjt:  VSDLPPDKPVAAFRSP-VIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKPISKD

KAG6602132.1 hypothetical protein SDJN03_07365, partial [Cucurbita argyrosperma subsp. sororia]8.7e-0868.75Show/hide
Query:  RVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKPIS
        RVG  K KSVIPK+RKLVKTM+YH +K+FL SLFR   + HNRPKPI+
Subjt:  RVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKPIS

KAG6602134.1 hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0856.94Show/hide
Query:  VSDLPPDKPVAAFRSP-VIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIH-NRPKPISKD
        V  L P KP  A  S   +  R G  K+KSVIPK+RKLVKTM+YH +KDFL SLFRP    H  RPKPI  D
Subjt:  VSDLPPDKPVAAFRSP-VIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIH-NRPKPISKD

XP_022141661.1 uncharacterized protein LOC111011963 [Momordica charantia]8.1e-0650Show/hide
Query:  SDLPPDKPV-----AAFRSPVIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKP
        ++L P+ PV     A   +  I  R GG K+KSVIPK+R LVKTMIY+ +KDF+ISLFRP       P P
Subjt:  SDLPPDKPV-----AAFRSPVIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKP

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ7 Uncharacterized protein1.6e-39100Show/hide
Query:  MHCTLLPHHNRVSDLPPDKPVAAFRSPVIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKPISKDL
        MHCTLLPHHNRVSDLPPDKPVAAFRSPVIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKPISKDL
Subjt:  MHCTLLPHHNRVSDLPPDKPVAAFRSPVIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKPISKDL

A0A6J1CJW3 uncharacterized protein LOC1110119633.9e-0650Show/hide
Query:  SDLPPDKPV-----AAFRSPVIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKP
        ++L P+ PV     A   +  I  R GG K+KSVIPK+R LVKTMIY+ +KDF+ISLFRP       P P
Subjt:  SDLPPDKPV-----AAFRSPVIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTGCACACTCCTGCCCCACCACAATCGCGTCTCCGATCTTCCTCCAGACAAGCCGGTGGCGGCGTTCAGAAGCCCTGTGATTCGGGACAGAGTCGGCGGTAGGAA
AATAAAATCTGTGATTCCCAAGCAGAGGAAGCTGGTGAAGACCATGATTTACCACTCCCTTAAGGACTTCCTTATTTCCCTCTTTCGTCCCTCCTCGGACATCCACAACC
GCCCCAAACCCATTTCTAAAGATTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTGCACACTCCTGCCCCACCACAATCGCGTCTCCGATCTTCCTCCAGACAAGCCGGTGGCGGCGTTCAGAAGCCCTGTGATTCGGGACAGAGTCGGCGGTAGGAA
AATAAAATCTGTGATTCCCAAGCAGAGGAAGCTGGTGAAGACCATGATTTACCACTCCCTTAAGGACTTCCTTATTTCCCTCTTTCGTCCCTCCTCGGACATCCACAACC
GCCCCAAACCCATTTCTAAAGATTTGTAATCTATCATCACTCTTACATTACATCTTTGTATCAAAG
Protein sequenceShow/hide protein sequence
MHCTLLPHHNRVSDLPPDKPVAAFRSPVIRDRVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKPISKDL