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CSPI06G19940 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G19940
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:17878324..17878860
RNA-Seq ExpressionCSPI06G19940
SyntenyCSPI06G19940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647261.1 hypothetical protein Csa_018288 [Cucumis sativus]3.6e-2796.88Show/hide
Query:  MKFRVFSGNNQVIPSKSETATIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPKHG
        MKFRVFSGNNQVIP+KSETATIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPK G
Subjt:  MKFRVFSGNNQVIPSKSETATIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPKHG
KAG6602131.1 hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]3.8e-0554.24Show/hide
Query:  PSKSETATIVYG---GAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPKHGGSTNP
        P  + T+T   G   G G VKSVIPKKR+LVK MMY CIK +IKSLF   PK      P
Subjt:  PSKSETATIVYG---GAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPKHGGSTNP
KAG6602134.1 hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0657.89Show/hide
Query:  VIPSKSETA-----TIVY-GGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPK
        +IP+K +TA     ++ Y  G G VKSVIPKKR+LVK MMY CIK+++KSLF P PK
Subjt:  VIPSKSETA-----TIVY-GGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPK
TYK18680.1 hypothetical protein E5676_scaffold481G00190 [Cucumis melo var. makuwa]8.0e-1976.92Show/hide
Query:  MKFRVFSGNNQVIPSKSETA---TIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPK
        MKFRVFS NN V+P K++TA    IVY GAGN+KSVIPKKR+LVKRMMYDCIKEWIKSLF PTP+
Subjt:  MKFRVFSGNNQVIPSKSETA---TIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPK
TrEMBL top hitse value%identityAlignment
A0A0A0KFQ1 Uncharacterized protein9.1e-3797.44Show/hide
Query:  MKFRVFSGNNQVIPSKSETATIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPKHGGSTNPPEKEATHQH
        MKFRVFSGNNQVIP+KSETATIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPK GGSTNPPEKEATHQH
Subjt:  MKFRVFSGNNQVIPSKSETATIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPKHGGSTNPPEKEATHQH
A0A5D3D590 Uncharacterized protein3.9e-1976.92Show/hide
Query:  MKFRVFSGNNQVIPSKSETA---TIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPK
        MKFRVFS NN V+P K++TA    IVY GAGN+KSVIPKKR+LVKRMMYDCIKEWIKSLF PTP+
Subjt:  MKFRVFSGNNQVIPSKSETA---TIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCAGAGTCTTCTCCGGCAACAACCAGGTGATTCCGTCGAAATCAGAGACGGCGACGATTGTGTATGGAGGTGCCGGAAATGTGAAATCTGTGATTCCTAAGAA
GAGGAGGTTAGTGAAGAGGATGATGTACGATTGTATTAAAGAATGGATCAAATCCCTGTTTTGTCCCACGCCGAAACATGGAGGCTCCACAAATCCGCCGGAAAAAGAAG
CAACTCATCAGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTCAGAGTCTTCTCCGGCAACAACCAGGTGATTCCGTCGAAATCAGAGACGGCGACGATTGTGTATGGAGGTGCCGGAAATGTGAAATCTGTGATTCCTAAGAA
GAGGAGGTTAGTGAAGAGGATGATGTACGATTGTATTAAAGAATGGATCAAATCCCTGTTTTGTCCCACGCCGAAACATGGAGGCTCCACAAATCCGCCGGAAAAAGAAG
CAACTCATCAGCACTGA
Protein sequenceShow/hide protein sequence
MKFRVFSGNNQVIPSKSETATIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPKHGGSTNPPEKEATHQH