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CSPI06G20240 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G20240
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:18277930..18278409
RNA-Seq ExpressionCSPI06G20240
SyntenyCSPI06G20240
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN47710.1 hypothetical protein Csa_018259 [Cucumis sativus]1.2e-5090.08Show/hide
Query:  MMSISHNCCASILPATILIISFSKQRRFLTSNDDGEFLLVFNDDGVCPLTTIFSSMFAVSLLVVAFFVILTRESIYVRCSPFPQDTCTLSVIEESVNSPS
        M SISH+CCASILPATILIISFSKQR+FL SN+DGEFLLVFNDD VCPLT IFSSMF  SLLVVA FVILT+ESI+VRCSPFPQDTCTLSVIEESVNSPS
Subjt:  MMSISHNCCASILPATILIISFSKQRRFLTSNDDGEFLLVFNDDGVCPLTTIFSSMFAVSLLVVAFFVILTRESIYVRCSPFPQDTCTLSVIEESVNSPS

Query:  STWVSLRVIRLPARSLLLVDT
        STWVSLRVIRLPARSLLLVDT
Subjt:  STWVSLRVIRLPARSLLLVDT
TrEMBL top hitse value%identityAlignment
A0A0A0KDC5 Uncharacterized protein5.9e-5190.08Show/hide
Query:  MMSISHNCCASILPATILIISFSKQRRFLTSNDDGEFLLVFNDDGVCPLTTIFSSMFAVSLLVVAFFVILTRESIYVRCSPFPQDTCTLSVIEESVNSPS
        M SISH+CCASILPATILIISFSKQR+FL SN+DGEFLLVFNDD VCPLT IFSSMF  SLLVVA FVILT+ESI+VRCSPFPQDTCTLSVIEESVNSPS
Subjt:  MMSISHNCCASILPATILIISFSKQRRFLTSNDDGEFLLVFNDDGVCPLTTIFSSMFAVSLLVVAFFVILTRESIYVRCSPFPQDTCTLSVIEESVNSPS

Query:  STWVSLRVIRLPARSLLLVDT
        STWVSLRVIRLPARSLLLVDT
Subjt:  STWVSLRVIRLPARSLLLVDT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGCATCTCTCACAATTGTTGTGCATCTATTTTGCCTGCTACGATACTCATCATCTCTTTTTCAAAGCAACGACGATTTCTCACCTCAAACGACGATGGCGAGTT
CTTATTGGTATTCAATGACGATGGCGTATGTCCTCTCACGACGATTTTTTCATCTATGTTCGCTGTCTCCCTGCTCGTCGTTGCTTTCTTCGTCATATTGACCCGGGAAA
GTATCTATGTTCGTTGTTCACCTTTCCCTCAAGATACTTGTACGCTATCGGTCATTGAGGAATCTGTCAACTCACCGTCATCTACATGGGTTTCGCTTAGGGTTATTCGT
CTACCAGCTCGCTCTCTATTGCTAGTAGACACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGCATCTCTCACAATTGTTGTGCATCTATTTTGCCTGCTACGATACTCATCATCTCTTTTTCAAAGCAACGACGATTTCTCACCTCAAACGACGATGGCGAGTT
CTTATTGGTATTCAATGACGATGGCGTATGTCCTCTCACGACGATTTTTTCATCTATGTTCGCTGTCTCCCTGCTCGTCGTTGCTTTCTTCGTCATATTGACCCGGGAAA
GTATCTATGTTCGTTGTTCACCTTTCCCTCAAGATACTTGTACGCTATCGGTCATTGAGGAATCTGTCAACTCACCGTCATCTACATGGGTTTCGCTTAGGGTTATTCGT
CTACCAGCTCGCTCTCTATTGCTAGTAGACACTTAA
Protein sequenceShow/hide protein sequence
MMSISHNCCASILPATILIISFSKQRRFLTSNDDGEFLLVFNDDGVCPLTTIFSSMFAVSLLVVAFFVILTRESIYVRCSPFPQDTCTLSVIEESVNSPSSTWVSLRVIR
LPARSLLLVDT