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CSPI06G20390 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G20390
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionzinc_ribbon_15 domain-containing protein
Genome locationChr6:18439187..18439522
RNA-Seq ExpressionCSPI06G20390
SyntenyCSPI06G20390
Gene Ontology termsNA
InterPro domainsIPR031493 - Zinc-ribbon 15


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647272.1 hypothetical protein Csa_018307 [Cucumis sativus]8.8e-56100Show/hide
Query:  EQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPDFSFCPYCGS
        EQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPDFSFCPYCGS
Subjt:  EQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPDFSFCPYCGS

Query:  SL
        SL
Subjt:  SL

KAG7016486.1 hypothetical protein SDJN02_21595, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-5388.39Show/hide
Query:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQST-SATLLRALRCRSCNKVVEP
        MFFFFVGGLEQQVR+LLKSGA RCINCNSPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNC LFFPQS SPP  SDQST  ATL R LRCRSCNKVVEP
Subjt:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQST-SATLLRALRCRSCNKVVEP

Query:  DFSFCPYCGSSL
        +FSFCP+CGSSL
Subjt:  DFSFCPYCGSSL

XP_008466714.1 PREDICTED: uncharacterized protein LOC103504060 [Cucumis melo]1.6e-5794.59Show/hide
Query:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD
        MFFFFVGGLEQQVR+LLKSGAARCINC+SPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQS SA L RALRCRSCNKVVEPD
Subjt:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD

Query:  FSFCPYCGSSL
        FSFCPYCGSSL
Subjt:  FSFCPYCGSSL

XP_011657434.1 uncharacterized protein LOC105435859 [Cucumis sativus]4.1e-61100Show/hide
Query:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD
        MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD
Subjt:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD

Query:  FSFCPYCGSSL
        FSFCPYCGSSL
Subjt:  FSFCPYCGSSL

XP_038884584.1 uncharacterized protein LOC120075351 [Benincasa hispida]2.4e-5387.5Show/hide
Query:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQS-TSATLLRALRCRSCNKVVEP
        MFFFFVGGL+QQVR+++KS A RCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQS SPP  SDQS  SA LLRAL CRSCN+VVEP
Subjt:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQS-TSATLLRALRCRSCNKVVEP

Query:  DFSFCPYCGSSL
        DFSFCPYCGSSL
Subjt:  DFSFCPYCGSSL

TrEMBL top hitse value%identityAlignment
A0A0A0KDD6 zinc_ribbon_15 domain-containing protein2.0e-61100Show/hide
Query:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD
        MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD
Subjt:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD

Query:  FSFCPYCGSSL
        FSFCPYCGSSL
Subjt:  FSFCPYCGSSL

A0A1S3CRV3 uncharacterized protein LOC1035040607.8e-5894.59Show/hide
Query:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD
        MFFFFVGGLEQQVR+LLKSGAARCINC+SPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQS SA L RALRCRSCNKVVEPD
Subjt:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD

Query:  FSFCPYCGSSL
        FSFCPYCGSSL
Subjt:  FSFCPYCGSSL

A0A5A7V2D0 zinc_ribbon_15 domain-containing protein7.8e-5894.59Show/hide
Query:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD
        MFFFFVGGLEQQVR+LLKSGAARCINC+SPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQS SA L RALRCRSCNKVVEPD
Subjt:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD

Query:  FSFCPYCGSSL
        FSFCPYCGSSL
Subjt:  FSFCPYCGSSL

A0A6J1HEV4 uncharacterized protein LOC1114628855.8e-5387.5Show/hide
Query:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQ-STSATLLRALRCRSCNKVVEP
        MFFFFVGGLEQQVR LLK+GA RCI+CNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFP+S SPP  SDQ   SA LLRALRC SCNKVVEP
Subjt:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQ-STSATLLRALRCRSCNKVVEP

Query:  DFSFCPYCGSSL
        DFSFCP+CGSSL
Subjt:  DFSFCPYCGSSL

A0A6J1JRI4 uncharacterized protein LOC1114891571.4e-5185.71Show/hide
Query:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQST-SATLLRALRCRSCNKVVEP
        MFFFFVGGLEQQVR+LLKS A RCINCNSPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNC LFFP+S SPP  SDQST  A L R LRCRSCNKVVEP
Subjt:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQST-SATLLRALRCRSCNKVVEP

Query:  DFSFCPYCGSSL
        DFSFCP+CG SL
Subjt:  DFSFCPYCGSSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G44414.1 unknown protein3.5e-4266.67Show/hide
Query:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD
        MFFFFVGGL QQVR++LKSGA  CI C S ADLV+Y+KV+KLFFVPVWRWPGK+PL+HC +C LFFPQSLSPP  S             CR C++VVEP+
Subjt:  MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPD

Query:  FSFCPYCGSSL
        F FCP+CGSSL
Subjt:  FSFCPYCGSSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCTTCTTCGTTGGAGGTTTAGAGCAACAAGTTCGCCGACTCCTCAAATCCGGCGCCGCCCGTTGTATAAACTGCAACTCCCCGGCCGATCTCGTCGACTATGA
GAAAGTCCTAAAGCTTTTCTTTGTTCCTGTGTGGCGGTGGCCGGGAAAAGAGCCATTGATGCACTGCAACAATTGTAAGCTCTTTTTCCCCCAGTCCTTATCTCCGCCGT
CATTTTCCGATCAATCGACATCAGCCACTCTTTTAAGAGCCCTTCGTTGCCGTTCTTGCAACAAAGTAGTGGAGCCCGACTTCAGTTTCTGCCCTTACTGTGGATCTTCT
TTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTCTTCTTCGTTGGAGGTTTAGAGCAACAAGTTCGCCGACTCCTCAAATCCGGCGCCGCCCGTTGTATAAACTGCAACTCCCCGGCCGATCTCGTCGACTATGA
GAAAGTCCTAAAGCTTTTCTTTGTTCCTGTGTGGCGGTGGCCGGGAAAAGAGCCATTGATGCACTGCAACAATTGTAAGCTCTTTTTCCCCCAGTCCTTATCTCCGCCGT
CATTTTCCGATCAATCGACATCAGCCACTCTTTTAAGAGCCCTTCGTTGCCGTTCTTGCAACAAAGTAGTGGAGCCCGACTTCAGTTTCTGCCCTTACTGTGGATCTTCT
TTGTAA
Protein sequenceShow/hide protein sequence
MFFFFVGGLEQQVRRLLKSGAARCINCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPQSLSPPSFSDQSTSATLLRALRCRSCNKVVEPDFSFCPYCGSS
L