CuGenDBv2

Gene ID	CSPI06G20400
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	TLC domain-containing protein 2
Genome location	Chr6:18444581..18448233
RNA-Seq Expression	CSPI06G20400
Synteny	CSPI06G20400
Gene Ontology terms	GO:0007009 - plasma membrane organization (biological process) GO:0055091 - phospholipid homeostasis (biological process) GO:0071709 - membrane assembly (biological process) GO:0097035 - regulation of membrane lipid distribution (biological process) GO:0005886 - plasma membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR006634 - TRAM/LAG1/CLN8 homology domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004150440.1 TLC domain-containing protein 2 [Cucumis sativus]

1.2e-152

99.65

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Query:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE
        MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSY SGSE
Subjt:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE

Query:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS
        GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS
Subjt:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS

Query:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE
        IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE
Subjt:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE

XP_008466713.1 PREDICTED: TLC domain-containing protein 2 [Cucumis melo]

1.9e-147

96.1

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Query:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE
        MAGRTLLKEKSRA SFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIR+L+SKDPLLVNTSVSLLHSI+TSASVLFVLVNRWLSYDS SE
Subjt:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE

Query:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS
        GMFEHSQLFGGTWPWA+AALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTL+CEMHSIFLHVRRLRRMAGVRDAKS
Subjt:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS

Query:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE
        IIVKVEWILNWLTFVFARFVPHILITVKLIIDA KFDKGVELPLALSGM GMNLLNALLGIDLLNAV+KESNYKKTDDTHHE
Subjt:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE

XP_022939854.1 TLC domain-containing protein 2 [Cucurbita moschata]

2.3e-132

86.88

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Query:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE
        MAGRT+LKEKSRA SFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L+SK+PL+VNT+VSLLHSIITSASVLFVL NRWLS+  GS+
Subjt:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE

Query:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS
        GMFEHSQLFGGTWPWA+AALCFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE+HSIFLHVRRLRRMAGVRDA+S
Subjt:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS

Query:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE
         IVKVEW LNWLTF FARFVPHILIT KLI+DASKFDKGVELPLAL GMA MNLLN  LGIDL NAVKKESNY+K D  HHE
Subjt:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE

XP_023550889.1 TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo]

1.7e-132

86.88

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Query:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE
        MAGRT+LKEKSRA SFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L+SK+PL+VNT+VSLLHSIITSASVLFVLVNRWLS+  GS+
Subjt:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE

Query:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS
        GMFEHSQLFGGTWPWA+AALCFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE+HSIFLHVRRLRRMAGVRDA+S
Subjt:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS

Query:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE
         IVKVEW LNWLTF+FARFVPHILIT KLI+DASKFDKGVELPLAL GMA MNLLN  LGIDL NAVKKESNY+K D  H+E
Subjt:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE

XP_038884583.1 TLC domain-containing protein 2 [Benincasa hispida]

8.9e-137

90.43

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Query:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE
        MAGRT+LKEK RA SFFSATL+LWSVSL FEILFDRRF LLYVVFGALFYQSANS+IR L+SKDPLLVNTSVSLLHS ITSASVLFVLVNRWLSY  GSE
Subjt:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE

Query:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS
        G+FEHSQLFGGTWPWA+AALCFSCGYFAYDQWDML+YGLYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICEMHSIFLHVRRLRRMAGVRDAKS
Subjt:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS

Query:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE
        +IVKVEWILNWLTFVFARFVPHILIT KLI+DASKFDKG+ELPLALSGMAGMNLLNALLG+DLL+AV+KES Y+KTD +HHE
Subjt:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KH54 TLC domain-containing protein

5.6e-153

99.65

Show/hide

Query:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE
        MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSY SGSE
Subjt:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE

Query:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS
        GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS
Subjt:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS

Query:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE
        IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE
Subjt:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE

A0A1S3CRX5 TLC domain-containing protein 2

9.2e-148

96.1

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Query:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE
        MAGRTLLKEKSRA SFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIR+L+SKDPLLVNTSVSLLHSI+TSASVLFVLVNRWLSYDS SE
Subjt:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE

Query:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS
        GMFEHSQLFGGTWPWA+AALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTL+CEMHSIFLHVRRLRRMAGVRDAKS
Subjt:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS

Query:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE
        IIVKVEWILNWLTFVFARFVPHILITVKLIIDA KFDKGVELPLALSGM GMNLLNALLGIDLLNAV+KESNYKKTDDTHHE
Subjt:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE

A0A6J1CKF5 TLC domain-containing protein 2 isoform X2

3.2e-124

83.69

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Query:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE
        MAGR + KEKSRA SFFSATL+LW VS+WFEILF RR  LLYVVFGALFYQSAN ++R L+SKDPL VNTSVSLLHS ITSASVLF+LV++WLSY  GS 
Subjt:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE

Query:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS
        GMFEHSQL GGTW  A+AALCFSCGYFAYDQWDML Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE+HSIFLHVRRLRRMAGVRDAKS
Subjt:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS

Query:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE
        I+VKVEWILNWLTFVFAR VPHILIT KL++DASKFD+GVELPLALSGMAGMNLLNA LGIDL+NAVKKES Y+K D    E
Subjt:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE

A0A6J1FID3 TLC domain-containing protein 2

1.1e-132

86.88

Show/hide

Query:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE
        MAGRT+LKEKSRA SFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L+SK+PL+VNT+VSLLHSIITSASVLFVL NRWLS+  GS+
Subjt:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE

Query:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS
        GMFEHSQLFGGTWPWA+AALCFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE+HSIFLHVRRLRRMAGVRDA+S
Subjt:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS

Query:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE
         IVKVEW LNWLTF FARFVPHILIT KLI+DASKFDKGVELPLAL GMA MNLLN  LGIDL NAVKKESNY+K D  HHE
Subjt:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE

A0A6J1K0R9 TLC domain-containing protein 2

4.2e-132

86.17

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Query:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE
        MAGRT+LKE+SRA SFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L+SK+PL+VNT+VSLLHSIITSASVLF+LVNRWLS+  G +
Subjt:  MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSE

Query:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS
        GMFEHSQLFGGTWPWA+AALCFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE+HSIFLHVRRLRRMAGVRDA+S
Subjt:  GMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKS

Query:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE
         IVKVEW LNWLTF+FARFVPHILIT KLI+DASKFDKGVELPLAL GMA MNLLN  LGIDL NAVKKESNY+K D  HHE
Subjt:  IIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE

SwissProt top hits

e value

%identity

Alignment

A8WGS4 TLC domain-containing protein 2

3.4e-06

27.5

Show/hide

Query:  NTSVSLLHSIITSA-SVLFVLVNRWLSYDSGSEGMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDM-LRYGLYSGWIPAILVHHLVLLICFTLALYRNV
        N S S +HS+IT   SVL   ++  +     +E + E   +F      + A +  S GYF YD  DM +   +   W   +L HH+V++ CF +++    
Subjt:  NTSVSLLHSIITSA-SVLFVLVNRWLSYDSGSEGMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDM-LRYGLYSGWIPAILVHHLVLLICFTLALYRNV

Query:  TINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNA
         + +  + L+ E++S+FLH+R++ RMA +  AKS   +V  ++N  T+V  R      +T  L+++           +   G+A M  +N +L   L+ +
Subjt:  TINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNA

Q8VC26 TLC domain-containing protein 2

3.8e-05

26.77

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Query:  NTSVSLLHSIITSASVLFVLVNRWLSYDSGSEGMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDML-RYGLYSGWIPAILVHHLVLLICFTLALYRNVT
        N  VSL+HS+++       LV  W      ++ + +H        PWA   +  S GYFA D  DML    L   W   +L HHL ++ C + A+     
Subjt:  NTSVSLLHSIITSASVLFVLVNRWLSYDSGSEGMFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDML-RYGLYSGWIPAILVHHLVLLICFTLALYRNVT

Query:  INYLNLTLICEMHSIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELP-LALSGMAGMNLLNALLGIDLL
        + +  ++L+ E++SI LH+R+L  ++    A S+  +V    +  T V  R +P  L  + L +    +   + L  L ++G+  +  ++   GI +L
Subjt:  INYLNLTLICEMHSIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELP-LALSGMAGMNLLNALLGIDLL

Arabidopsis top hits

e value

%identity

Alignment

AT1G21790.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein

7.8e-99

67.04

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Query:  EKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSEGMFEHSQL
        +K+ A  FF ATLLLW VS+ FEI F+ R  LL+V+ G  F+Q  N  +R  +S+DP+ VNTSVSLLHSIITSASV+F+L+N+ L+   G + MF+HS+L
Subjt:  EKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSEGMFEHSQL

Query:  FGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKSIIVKVEWI
         GGTW WA+ ALCFSCGYFAYDQWDML+Y LYSG IP+ILVHHLVLL+CFTLALYRNVTINYL LTLICEMHSIFLHVR+LRRMAG+RD+ + +VK+EW+
Subjt:  FGGTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKSIIVKVEWI

Query:  LNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDD
        LNW  FVFAR +PHILIT+KLI DA KF KGVELPLALSGMAGMN+LN  LG+DL +A ++E ++++  +
Subjt:  LNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGGTAGAACATTGTTGAAGGAGAAAAGCAGGGCATGGAGCTTCTTCTCCGCGACATTACTGCTTTGGTCAGTCTCTCTTTGGTTCGAAATTCTATTCGACCGACG
ATTCCGGCTGCTCTACGTCGTTTTCGGAGCTCTGTTCTACCAGTCCGCCAATTCCTCCATTAGATTACTTCTTTCCAAGGATCCTCTTTTAGTCAACACCTCCGTTTCTC
TTCTTCATTCCATTATCACCTCTGCTTCAGTGCTGTTTGTTTTGGTGAACCGGTGGCTGAGTTATGATTCCGGTTCAGAGGGGATGTTTGAGCATTCACAATTGTTTGGA
GGAACATGGCCGTGGGCTTTTGCAGCTTTGTGCTTCTCATGTGGATATTTTGCATATGATCAGTGGGACATGCTGCGATATGGACTATATAGTGGCTGGATTCCTGCGAT
CTTGGTTCATCATCTGGTTCTTCTCATTTGCTTCACGCTTGCTTTGTATAGGAATGTCACCATCAATTATCTCAATCTCACTCTCATTTGCGAGATGCATTCTATCTTTC
TCCATGTAAGGCGGTTGCGAAGGATGGCTGGTGTTCGTGATGCCAAGAGCATTATCGTGAAAGTTGAATGGATTCTCAACTGGCTAACATTTGTTTTCGCAAGGTTTGTT
CCACACATTCTCATTACTGTCAAGCTCATCATAGATGCTTCCAAGTTTGATAAAGGCGTAGAGCTGCCACTTGCATTGTCTGGGATGGCTGGCATGAACCTGCTGAATGC
TTTGCTTGGTATTGATCTTTTAAACGCTGTAAAGAAAGAGAGTAATTACAAGAAAACTGATGACACTCATCATGAATGA

mRNA sequence

Show/hide mRNA sequence

GGTTGCCCCTCTCCTCTCTCCGCTCTCTTCATTTCTGTTTATGTCAATCGTCCTCTTCTCCCGCTGATACGGAACACACGATTTAGCTCCACACCGACTCCATGGCGGGT
AGAACATTGTTGAAGGAGAAAAGCAGGGCATGGAGCTTCTTCTCCGCGACATTACTGCTTTGGTCAGTCTCTCTTTGGTTCGAAATTCTATTCGACCGACGATTCCGGCT
GCTCTACGTCGTTTTCGGAGCTCTGTTCTACCAGTCCGCCAATTCCTCCATTAGATTACTTCTTTCCAAGGATCCTCTTTTAGTCAACACCTCCGTTTCTCTTCTTCATT
CCATTATCACCTCTGCTTCAGTGCTGTTTGTTTTGGTGAACCGGTGGCTGAGTTATGATTCCGGTTCAGAGGGGATGTTTGAGCATTCACAATTGTTTGGAGGAACATGG
CCGTGGGCTTTTGCAGCTTTGTGCTTCTCATGTGGATATTTTGCATATGATCAGTGGGACATGCTGCGATATGGACTATATAGTGGCTGGATTCCTGCGATCTTGGTTCA
TCATCTGGTTCTTCTCATTTGCTTCACGCTTGCTTTGTATAGGAATGTCACCATCAATTATCTCAATCTCACTCTCATTTGCGAGATGCATTCTATCTTTCTCCATGTAA
GGCGGTTGCGAAGGATGGCTGGTGTTCGTGATGCCAAGAGCATTATCGTGAAAGTTGAATGGATTCTCAACTGGCTAACATTTGTTTTCGCAAGGTTTGTTCCACACATT
CTCATTACTGTCAAGCTCATCATAGATGCTTCCAAGTTTGATAAAGGCGTAGAGCTGCCACTTGCATTGTCTGGGATGGCTGGCATGAACCTGCTGAATGCTTTGCTTGG
TATTGATCTTTTAAACGCTGTAAAGAAAGAGAGTAATTACAAGAAAACTGATGACACTCATCATGAATGAACGAGGACTAACTTTGGTGGAAATTAACACGGAAGAAAAA
ATTTCATAATATCAGAGTTTAATATTTAGTTGAAGAAACTTTGTACTATTAATATTGTTTTTAATATAGTTCTTAGGCTTTTAATAAGTTTAGGC

Protein sequence

Show/hide protein sequence

MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLLLSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYDSGSEGMFEHSQLFG
GTWPWAFAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFV
PHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE

CSPI06G20400 (gene) of Cucumber (PI 183967) v1 genome