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CSPI06G20420 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G20420
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCACTA en-spm transposon protein
Genome locationChr6:18479635..18480146
RNA-Seq ExpressionCSPI06G20420
SyntenyCSPI06G20420
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060244.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]6.3e-1950.49Show/hide
Query:  IAWKIPISIAQGANKSTLPH------------VVCFNNTINEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYIS
        I W+IP++IA GA K   PH            V+ FN   ++A+ R  EHQML+T+KEF  D   HFKK+SD E+AR NPP+ LV   +DWHFLCDHYIS
Subjt:  IAWKIPISIAQGANKSTLPH------------VVCFNNTINEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYIS

Query:  QQF
        + F
Subjt:  QQF

KAA0063909.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.4e-1850Show/hide
Query:  IPISIAQGANKSTLPHVVCFNNTI---------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYISQQF
        IP++IA GA K   PH +CF+  I         ++A+ R  EHQML+T+KEF  D   HFKK+SD E+AR NPP+ LV   +DW+FLCDHY+S  F
Subjt:  IPISIAQGANKSTLPHVVCFNNTI---------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYISQQF

KAA0066286.1 uncharacterized protein E6C27_scaffold21G003350 [Cucumis melo var. makuwa]4.8e-1950.51Show/hide
Query:  KIPISIAQGANKSTLPHVVCFNNTI-----------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYISQQF
        +IP++IA GA K   PH V F+  I           ++A+ R  EHQML+T+KEF  D   HFKK+SD E+AR NPP+ LV   +DWHFLCDHYIS+ F
Subjt:  KIPISIAQGANKSTLPHVVCFNNTI-----------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYISQQF

TYK11881.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.8e-1949.51Show/hide
Query:  TIAWKIPISIAQGANKSTLPHVVCFNNTI-----------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYIS
        TI  +IP++IA G  K   PH V F+  I           ++A+ R  EHQML+T+KEF  D   HFKK+SD E+AR NPP+ LV   +DWHFLCDHYIS
Subjt:  TIAWKIPISIAQGANKSTLPHVVCFNNTI-----------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYIS

Query:  QQF
        + F
Subjt:  QQF

TYK18190.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.4e-1848.51Show/hide
Query:  KIPISIAQGANKSTLPHVVCFNNTI-------------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYISQQ
        +IP+++A GA K   PH V F+  I             ++A+ R  EHQML+T+KEF  D   HFKK+SD E+AR NPP+ LV   +DWHFLCDHYIS+ 
Subjt:  KIPISIAQGANKSTLPHVVCFNNTI-------------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYISQQ

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A5A7UYW5 CACTA en-spm transposon protein3.1e-1950.49Show/hide
Query:  IAWKIPISIAQGANKSTLPH------------VVCFNNTINEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYIS
        I W+IP++IA GA K   PH            V+ FN   ++A+ R  EHQML+T+KEF  D   HFKK+SD E+AR NPP+ LV   +DWHFLCDHYIS
Subjt:  IAWKIPISIAQGANKSTLPH------------VVCFNNTINEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYIS

Query:  QQF
        + F
Subjt:  QQF

A0A5A7VEF4 CACTA en-spm transposon protein1.2e-1850Show/hide
Query:  IPISIAQGANKSTLPHVVCFNNTI---------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYISQQF
        IP++IA GA K   PH +CF+  I         ++A+ R  EHQML+T+KEF  D   HFKK+SD E+AR NPP+ LV   +DW+FLCDHY+S  F
Subjt:  IPISIAQGANKSTLPHVVCFNNTI---------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYISQQF

A0A5A7VIW1 DUF4218 domain-containing protein2.3e-1950.51Show/hide
Query:  KIPISIAQGANKSTLPHVVCFNNTI-----------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYISQQF
        +IP++IA GA K   PH V F+  I           ++A+ R  EHQML+T+KEF  D   HFKK+SD E+AR NPP+ LV   +DWHFLCDHYIS+ F
Subjt:  KIPISIAQGANKSTLPHVVCFNNTI-----------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYISQQF

A0A5D3CJ98 CACTA en-spm transposon protein2.3e-1949.51Show/hide
Query:  TIAWKIPISIAQGANKSTLPHVVCFNNTI-----------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYIS
        TI  +IP++IA G  K   PH V F+  I           ++A+ R  EHQML+T+KEF  D   HFKK+SD E+AR NPP+ LV   +DWHFLCDHYIS
Subjt:  TIAWKIPISIAQGANKSTLPHVVCFNNTI-----------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYIS

Query:  QQF
        + F
Subjt:  QQF

A0A5D3D348 CACTA en-spm transposon protein6.8e-1948.51Show/hide
Query:  KIPISIAQGANKSTLPHVVCFNNTI-------------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYISQQ
        +IP+++A GA K   PH V F+  I             ++A+ R  EHQML+T+KEF  D   HFKK+SD E+AR NPP+ LV   +DWHFLCDHYIS+ 
Subjt:  KIPISIAQGANKSTLPHVVCFNNTI-------------NEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYISQQ

Query:  F
        F
Subjt:  F

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCACTCAAGAAACTTGGAGTTAGAGAGATACGTACAATAGCATGGAAGATCCCAATATCCATCGCTCAAGGAGCAAATAAGTCGACTTTGCCACATGTTGTTTG
CTTCAACAACACCATAAATGAAGCACTTACTCGATTAGGTGAGCATCAAATGCTCAGCACGTGGAAAGAGTTCATGGAAGACAACCGTAGCCATTTTAAGAAGTTTAGTG
ATACTGAACAAGCACGAGTCAATCCACCTTCCAGATTGGTGAATCATGTGAAAGATTGGCACTTCCTCTGTGATCACTACATTAGTCAACAATTTTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCACTCAAGAAACTTGGAGTTAGAGAGATACGTACAATAGCATGGAAGATCCCAATATCCATCGCTCAAGGAGCAAATAAGTCGACTTTGCCACATGTTGTTTG
CTTCAACAACACCATAAATGAAGCACTTACTCGATTAGGTGAGCATCAAATGCTCAGCACGTGGAAAGAGTTCATGGAAGACAACCGTAGCCATTTTAAGAAGTTTAGTG
ATACTGAACAAGCACGAGTCAATCCACCTTCCAGATTGGTGAATCATGTGAAAGATTGGCACTTCCTCTGTGATCACTACATTAGTCAACAATTTTGGTAA
Protein sequenceShow/hide protein sequence
MAALKKLGVREIRTIAWKIPISIAQGANKSTLPHVVCFNNTINEALTRLGEHQMLSTWKEFMEDNRSHFKKFSDTEQARVNPPSRLVNHVKDWHFLCDHYISQQFW