; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G20430 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G20430
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionphotosystem II 22 kDa protein, chloroplastic
Genome locationChr6:18484328..18486196
RNA-Seq ExpressionCSPI06G20430
SyntenyCSPI06G20430
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0010196 - nonphotochemical quenching (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150442.1 photosystem II 22 kDa protein, chloroplastic [Cucumis sativus]1.7e-148100Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

XP_008466710.1 PREDICTED: photosystem II 22 kDa protein, chloroplastic [Cucumis melo]1.1e-14497.79Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        MAAQTMLLTSGVCVGHGVCLKRELSLRPN  QFTRLFFNPLP+HSVSLP RGFT LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

XP_022952982.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata]3.5e-13088.41Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE
        MAAQTM+L+SGVC  HGV LKRE++     LRPN  QF+RLFFNPLPS SVSLP RGF TLA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG
        LFVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

XP_022991058.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima]2.9e-12988.04Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE
        MAAQTM+L+SGVC  HGV LKRE++     LRPN  Q +RLFFNPLPS SVSLP RGF TLA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG
        LFVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

XP_038885143.1 photosystem II 22 kDa protein, chloroplastic [Benincasa hispida]9.8e-14195.96Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        MAAQTMLLTSGVCVGHGV +KREL LRPN  QF+RLFFNPLPSHSVSLP RGFTTLAVFKSRTKAPPKKV KPKQKVEDGIFGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAAS+LGEAITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK+FRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

TrEMBL top hitse value%identityAlignment
A0A0A0K7N4 Photosystem II protein8.0e-149100Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

A0A1S3CS23 photosystem II 22 kDa protein, chloroplastic5.4e-14597.79Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        MAAQTMLLTSGVCVGHGVCLKRELSLRPN  QFTRLFFNPLP+HSVSLP RGFT LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

A0A5A7UZ08 Photosystem II 22 kDa protein5.4e-14597.79Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        MAAQTMLLTSGVCVGHGVCLKRELSLRPN  QFTRLFFNPLP+HSVSLP RGFT LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

A0A6J1GLX6 photosystem II 22 kDa protein, chloroplastic-like1.7e-13088.41Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE
        MAAQTM+L+SGVC  HGV LKRE++     LRPN  QF+RLFFNPLPS SVSLP RGF TLA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG
        LFVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

A0A6J1JV31 photosystem II 22 kDa protein, chloroplastic-like1.4e-12988.04Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE
        MAAQTM+L+SGVC  HGV LKRE++     LRPN  Q +RLFFNPLPS SVSLP RGF TLA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG
        LFVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

SwissProt top hitse value%identityAlignment
P54773 Photosystem II 22 kDa protein, chloroplastic6.6e-10876.17Show/hide
Query:  AQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLP----SHSVSLPPRGF--TTLAVFKSRTKAPPKKVEKP--KQKVEDGIFGTSGGIGFTKQN
        AQTMLLT+   V   +  K  L  R      + LF   LP    S S +     F  TT+A+FKS+ KAPPKKV  P  KQKVEDGIFGTSGGIGFTKQN
Subjt:  AQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLP----SHSVSLPPRGF--TTLAVFKSRTKAPPKKVEKP--KQKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF
        ELFVGRVAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRGKF+DDP P TGLE+AVIPPGKSF+SALGL EGGPLF
Subjt:  ELFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        GFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Q02060 Photosystem II 22 kDa protein, chloroplastic3.9e-10875.54Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQF------TRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQN
        MA   +L+  GV   + + LKR   L+    +       + LFF+PLPS S S     F TLA+FKS+ KA PKKVEKPK KVEDG+FGTSGGIGFTK+N
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQF------TRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF
        ELFVGRVAMIGFAAS+LGE ITGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+F+D  EP TGLE+AVIPPGK  RSALGLK  GPLF
Subjt:  ELFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        GFTK+NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKF+TD+E+++
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

Q9FPP4 Photosystem II 22 kDa protein, chloroplastic5.1e-10876.17Show/hide
Query:  AQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLP----SHSVSLPPRGF--TTLAVFKSRTKAPPKKVEKP--KQKVEDGIFGTSGGIGFTKQN
        AQTMLLT+   V   +  K  L  R      + LF   LP    S + +     F  TT+A+FKS+ KAPPKKV  P  KQKVEDGIFGTSGGIGFTKQN
Subjt:  AQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLP----SHSVSLPPRGF--TTLAVFKSRTKAPPKKVEKP--KQKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF
        ELFVGRVAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG+FIDDP PATGLE+AVIPPGKSF+SALGL EGGPLF
Subjt:  ELFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        GFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Q9SMB4 Photosystem II 22 kDa protein, chloroplastic9.0e-10575.46Show/hide
Query:  AQTMLLTSG--VCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPR-GFTTLAVFKSRTKAPPKK-VEKPKQKVEDGIFGTSGGIGFTKQNELFV
        AQTMLLT+   V +     L   L  +P  + F        PS S S       TT+A+FKS+ KAP KK V KPK+KVEDGIFGTSGGIGFTKQNELFV
Subjt:  AQTMLLTSG--VCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPR-GFTTLAVFKSRTKAPPKK-VEKPKQKVEDGIFGTSGGIGFTKQNELFV

Query:  GRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTK
        GRVAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGAL DRGKFIDDP P TGL++AVIPPGK F+SALGL EGGPLF FTK
Subjt:  GRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTK

Query:  ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        ANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+VFFF+AA+NPGTGKFVTDEE++
Subjt:  ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Q9XF91 Photosystem II 22 kDa protein, chloroplastic9.6e-10776.75Show/hide
Query:  AQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPR--GFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        AQTMLLTSGV  GH +  K  L+      +   LF +   +  V+LP R   F  LA+FK +TKA PKKVEKPK KVEDGIFGTSGGIGFTK NELFVGR
Subjt:  AQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPR--GFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK+ RSALGLKE GPLFGFTKAN
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        ELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Arabidopsis top hitse value%identityAlignment
AT1G44575.1 Chlorophyll A-B binding family protein6.8e-10876.75Show/hide
Query:  AQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPR--GFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        AQTMLLTSGV  GH +  K  L+      +   LF +   +  V+LP R   F  LA+FK +TKA PKKVEKPK KVEDGIFGTSGGIGFTK NELFVGR
Subjt:  AQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPR--GFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK+ RSALGLKE GPLFGFTKAN
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        ELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

AT1G44575.2 Chlorophyll A-B binding family protein4.5e-6773.82Show/hide
Query:  AQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPR--GFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        AQTMLLTSGV  GH +  K  L+      +   LF +   +  V+LP R   F  LA+FK +TKA PKKVEKPK KVEDGIFGTSGGIGFTK NELFVGR
Subjt:  AQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPR--GFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGG
        VAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK+ RSALGLKE G
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCAAACCATGCTCCTCACTTCTGGTGTGTGCGTCGGCCATGGTGTGTGTCTCAAAAGAGAATTGAGCCTTAGACCTAACTACACCCAATTCACTCGTCTCTT
TTTCAACCCTCTGCCGTCCCACTCTGTTTCTTTGCCGCCGCGTGGCTTCACCACTCTTGCTGTGTTTAAGTCTAGAACTAAAGCCCCGCCCAAGAAGGTTGAGAAGCCGA
AGCAGAAGGTTGAAGATGGAATTTTTGGGACTTCTGGTGGCATTGGTTTTACTAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCCATGATCGGCTTTGCTGCATCAATT
CTAGGAGAAGCGATCACCGGAAAGGGAATTCTAGCACAACTCAACTTAGAAACTGGAATTCCCATTTACGAGGCCGAGCCTCTTCTTCTCTTCTTCATCTTATTCACTCT
TCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCTGAACCCGCCACTGGATTGGAACGCGCCGTCATTCCTCCTGGGAAGAGCTTCAGATCCG
CCTTAGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTCACCAAGGCCAATGAGCTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGCGTTCTCGTTGATCGGAGAAATT
ATTACTGGAAAGGGAGCTTTGGCGCAATTGAACATCGAGACGGGAGTGCCGATCAATGAGATTGAGCCTCTGGTTTTATTGAATGTTGTGTTCTTCTTCATTGCGGCAGT
GAATCCTGGAACTGGTAAATTCGTGACGGATGAAGAAGATGATGAATGA
mRNA sequenceShow/hide mRNA sequence
CAAACTCTTCCACCAAATCCACACGCACAATCTCCTCTCTTCCCTTCCACCATACACTTTCAAAATCCCACTCTTCTTCTTCTTCATAAAAACCCATATATCCATGAATT
AGTTACCTTCAGTTTTTCCTTTTCAATAAACAAACAGCTCTGCTAAAAACACCTTTCTTCCACCATTTCCATGGCGGCTCAAACCATGCTCCTCACTTCTGGTGTGTGCG
TCGGCCATGGTGTGTGTCTCAAAAGAGAATTGAGCCTTAGACCTAACTACACCCAATTCACTCGTCTCTTTTTCAACCCTCTGCCGTCCCACTCTGTTTCTTTGCCGCCG
CGTGGCTTCACCACTCTTGCTGTGTTTAAGTCTAGAACTAAAGCCCCGCCCAAGAAGGTTGAGAAGCCGAAGCAGAAGGTTGAAGATGGAATTTTTGGGACTTCTGGTGG
CATTGGTTTTACTAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCCATGATCGGCTTTGCTGCATCAATTCTAGGAGAAGCGATCACCGGAAAGGGAATTCTAGCACAAC
TCAACTTAGAAACTGGAATTCCCATTTACGAGGCCGAGCCTCTTCTTCTCTTCTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTC
ATCGACGATCCTGAACCCGCCACTGGATTGGAACGCGCCGTCATTCCTCCTGGGAAGAGCTTCAGATCCGCCTTAGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTCAC
CAAGGCCAATGAGCTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGCGTTCTCGTTGATCGGAGAAATTATTACTGGAAAGGGAGCTTTGGCGCAATTGAACATCGAGA
CGGGAGTGCCGATCAATGAGATTGAGCCTCTGGTTTTATTGAATGTTGTGTTCTTCTTCATTGCGGCAGTGAATCCTGGAACTGGTAAATTCGTGACGGATGAAGAAGAT
GATGAATGAAGAGATGGATTGTGCTTTAATTTTTTGTCTGTACATGATGAACTTAGCAAATCCGTATGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGGGTT
GTTGTGCTATTAGAACATTTTTATTCTGCTTGAGCACTGGAATCAACGAAATGGAAGTAACAAACTTTGGGTAGTTAAGTTTAGGCAAACATCAGTCTTTTTTGCTTCTT
TCATTTTACTTTTCTCATCTTCCCACCTTTAGTTTGAGTGGAGAAAATTAATTAATAAATACATTAAGCAAAACATATTACAAGTAGATGGTTTGCGTCCAATAAATTAC
AATACCATTTCATACTTCTTAAAATTAGAAAAATAAAGAACAATCACCTTT
Protein sequenceShow/hide protein sequence
MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASI
LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEI
ITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE