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CSPI06G21050 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G21050
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptioncentromere protein V-like
Genome locationChr6:19105862..19112411
RNA-Seq ExpressionCSPI06G21050
SyntenyCSPI06G21050
Gene Ontology termsGO:0016846 - carbon-sulfur lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006913 - CENP-V/GFA domain
IPR011057 - Mss4-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146757.2 centromere protein V [Cucumis sativus]4.6e-7899.28Show/hide
Query:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
Subjt:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS
        CVDPGTLTHIEVRQFDGSNWEAS DQTGIASLSKLNIS
Subjt:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS

XP_008464790.1 PREDICTED: centromere protein V isoform X2 [Cucumis melo]2.8e-7596.32Show/hide
Query:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLN
        CVDPGTLTH+EVRQFDGSNWEASYD TGIAS SKLN
Subjt:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLN

XP_008464791.1 PREDICTED: centromere protein V isoform X3 [Cucumis melo]2.8e-7596.32Show/hide
Query:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLN
        CVDPGTLTH+EVRQFDGSNWEASYD TGIAS SKLN
Subjt:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLN

XP_016903270.1 PREDICTED: centromere protein V isoform X1 [Cucumis melo]1.2e-7595.65Show/hide
Query:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS
        CVDPGTLTH+EVRQFDGSNWEASYD TGIAS SKLN S
Subjt:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS

XP_016903271.1 PREDICTED: centromere protein V isoform X6 [Cucumis melo]1.2e-7595.65Show/hide
Query:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS
        CVDPGTLTH+EVRQFDGSNWEASYD TGIAS SKLN S
Subjt:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS

TrEMBL top hitse value%identityAlignment
A0A0A0KE05 CENP-V/GFA domain-containing protein2.2e-7899.28Show/hide
Query:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
Subjt:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS
        CVDPGTLTHIEVRQFDGSNWEAS DQTGIASLSKLNIS
Subjt:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS

A0A1S3CMD8 centromere protein V isoform X21.3e-7596.32Show/hide
Query:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLN
        CVDPGTLTH+EVRQFDGSNWEASYD TGIAS SKLN
Subjt:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLN

A0A1S4E4W3 centromere protein V isoform X66.0e-7695.65Show/hide
Query:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS
        CVDPGTLTH+EVRQFDGSNWEASYD TGIAS SKLN S
Subjt:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS

A0A1S4E5L6 centromere protein V isoform X16.0e-7695.65Show/hide
Query:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS
        CVDPGTLTH+EVRQFDGSNWEASYD TGIAS SKLN S
Subjt:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS

A0A5D3CJK9 Centromere protein V isoform X16.0e-7695.65Show/hide
Query:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS
        CVDPGTLTH+EVRQFDGSNWEASYD TGIAS SKLN S
Subjt:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSKLNIS

SwissProt top hitse value%identityAlignment
A0A0U1RR11 Centromere protein V-like protein 17.7e-2039.13Show/hide
Query:  LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + V TY   +H A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHIEVRQFDGSN
        GT+  + + +  G +
Subjt:  GTLTHIEVRQFDGSN

A0A0U1RRI6 Centromere protein V-like protein 37.7e-2039.13Show/hide
Query:  LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + V TY   +H A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHIEVRQFDGSN
        GT+  + + +  G +
Subjt:  GTLTHIEVRQFDGSN

P0DPI3 Centromere protein V-like protein 27.7e-2039.13Show/hide
Query:  LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + V TY   +H A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHIEVRQFDGSN
        GT+  + + +  G +
Subjt:  GTLTHIEVRQFDGSN

Q7Z7K6 Centromere protein V8.0e-3350.38Show/hide
Query:  LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP  RFKLL   +  ++TYTF +H A+HTFCK CG+ SFY PRSNP G  I   C+D 
Subjt:  LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHIEVRQFDGSNWE-ASYDQTGIASLSK
        GT+  +   +F+GS+WE A  +   I ++SK
Subjt:  GTLTHIEVRQFDGSNWE-ASYDQTGIASLSK

Q9CXS4 Centromere protein V3.6e-3350.38Show/hide
Query:  LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP  RFKLL  + + ++TYTF +H A+HTFCK CG+ SFY PRSNP G  I   C+D 
Subjt:  LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHIEVRQFDGSNWE-ASYDQTGIASLSK
        GT+  +   +F+GS+WE A  +   I ++SK
Subjt:  GTLTHIEVRQFDGSNWE-ASYDQTGIASLSK

Arabidopsis top hitse value%identityAlignment
AT5G16940.1 carbon-sulfur lyases6.2e-5768.66Show/hide
Query:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        M SEL+ H GGCHC K++WRV+A  SV+AW CNCS+C MR N HFIVP   F+LL DS +F++TYTFG+HTAKHTFCK CGITSFY PRSNPDGVA+T K
Subjt:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSK
        CV  GTL HIEV+ +DG NWE S+ +TGIAS SK
Subjt:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSK

AT5G16940.2 carbon-sulfur lyases6.2e-5768.66Show/hide
Query:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        M SEL+ H GGCHC K++WRV+A  SV+AW CNCS+C MR N HFIVP   F+LL DS +F++TYTFG+HTAKHTFCK CGITSFY PRSNPDGVA+T K
Subjt:  MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSK
        CV  GTL HIEV+ +DG NWE S+ +TGIAS SK
Subjt:  CVDPGTLTHIEVRQFDGSNWEASYDQTGIASLSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTGAGTTGGTTGTACATCATGGTGGATGTCACTGCAAGAAAGTAAGATGGCGAGTTGAAGCACCTGCCAGTGTTGTTGCTTGGGATTGCAACTGTTCCAACTG
CTTCATGAGGGCCAATACACATTTTATTGTACCTTTGGAACGGTTCAAGCTTTTAGGAGATTCTAGCAACTTTGTTTCTACCTACACATTTGGTTCTCACACTGCAAAAC
ATACCTTCTGCAAAAACTGCGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCTATTACTTTCAAATGTGTTGATCCTGGAACTTTGACCCATATT
GAGGTTAGGCAGTTTGATGGGAGCAACTGGGAGGCCTCTTATGATCAAACAGGCATTGCTTCATTGTCAAAGTTGAACATAAGTTAG
mRNA sequenceShow/hide mRNA sequence
CTTCATCGGTCGGCGCCGGTTCCCTGATTCACGGTTACGAACGCCCGTCGGCCACTGAGGTTGAGGAAAACGAATAATCATTCACTAAAAGGATTGGAAGGTTTGATTCC
TTTTCAATGGCTTCTGAGTTGGTTGTACATCATGGTGGATGTCACTGCAAGAAAGTAAGATGGCGAGTTGAAGCACCTGCCAGTGTTGTTGCTTGGGATTGCAACTGTTC
CAACTGCTTCATGAGGGCCAATACACATTTTATTGTACCTTTGGAACGGTTCAAGCTTTTAGGAGATTCTAGCAACTTTGTTTCTACCTACACATTTGGTTCTCACACTG
CAAAACATACCTTCTGCAAAAACTGCGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCTATTACTTTCAAATGTGTTGATCCTGGAACTTTGACC
CATATTGAGGTTAGGCAGTTTGATGGGAGCAACTGGGAGGCCTCTTATGATCAAACAGGCATTGCTTCATTGTCAAAGTTGAACATAAGTTAGTATGCATTTTGACAACT
GCTGTAAACTAAATTTATGACCGTTGATGATTGATACAAACTTTTTTTATATGGCTTCCATCAACGATTGATATGGCTGCTTGAAAAGGTTTGTTGCTCGGACAACCCCT
TCACGTGCAAACTTCCCCTTGCCGCTCGCTCTTTCCATTGTCGATCAGGATTTCCCATTACTGATAAAAATAGGTGCTACGTCTGGTCGGTAGTGTTTGGGTCGAGCAAG
CTGATGTCGGGTCCAATGTGTCGGTTGAAAACGAGGGATTTCATCCGAAAGATGGGATCGATAAGGAGTTCCTTACTATGTATAGTAAGAGAATGAACATGTCGCCTGAA
GACATGATGGACGCATGACCTGGTAGGTCCAGCGACTGTAGGTCGAGTTTCAATGGATTGGAGAGGAAGCGCGGAGGGTAGACTGTCGAGACTGTGGAGGTGGATTGTGC
GAATGAACAGCTGAGGGCCATTGCAGACTGGTTGAAGATAACTAGCCAAGAGGAAGACGTTGTGCGGGG
Protein sequenceShow/hide protein sequence
MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHI
EVRQFDGSNWEASYDQTGIASLSKLNIS