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CSPI06G21320 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G21320
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPatatin
Genome locationChr6:19304067..19305907
RNA-Seq ExpressionCSPI06G21320
SyntenyCSPI06G21320
Gene Ontology termsGO:0016042 - lipid catabolic process (biological process)
GO:0005773 - vacuole (cellular component)
GO:0016298 - lipase activity (molecular function)
GO:0045735 - nutrient reservoir activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578759.1 Patatin-like protein 6, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3983.49Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
        MAFGQSRSSNY    ALGSSLG+ GP+SSTD DAGNVK L++L DEVLKQKNVESVLFGGKRF+EQTNFEKLDWFA ELVLEHQRR CRIAPTVAFKQAT
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT

Query:  TSESAKEGS
        T E AKE S
Subjt:  TSESAKEGS

KAG7016287.1 Patatin-like protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-3983.49Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
        MAFGQSRSSNY    ALGSSLG+ GP+SSTD DAGNVK L++L DEVLKQKNVESVLFGGKRF+EQTNFEKLDWFA ELVLEHQRR CRIAPTVAFKQAT
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT

Query:  TSESAKEGS
        T E AKE S
Subjt:  TSESAKEGS

XP_008456474.1 PREDICTED: patatin-like protein 6 [Cucumis melo]2.5e-4492.66Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
        MAFGQSRSSNY    ALGSSLGEGGPSSSTD DAGNVKKLIEL DEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT

Query:  TSESAKEGS
        T ESAKE S
Subjt:  TSESAKEGS

XP_022938710.1 patatin-like protein 6 [Cucurbita moschata]1.4e-3983.49Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
        MAFGQSRSSNY    ALGSSLG+ GP+SSTD DAGNVK L++L DEVLKQKNVESVLFGGKRF+EQTNFEKLDWFA ELVLEHQRR CRIAPTVAFKQAT
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT

Query:  TSESAKEGS
        T E AKE S
Subjt:  TSESAKEGS

XP_038885272.1 patatin-like protein 6 [Benincasa hispida]1.2e-4188.99Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
        MAFGQSRSSNY    ALGSSLGEGGPSSSTD DAGNVK LIEL DEVLKQKNVESVLFGGKRFAEQTNFE LDWFA ELVLEHQRR CRIAPTVAFKQAT
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT

Query:  TSESAKEGS
        T ESAKE S
Subjt:  TSESAKEGS

TrEMBL top hitse value%identityAlignment
A0A0A0KJ62 Uncharacterized protein1.6e-49100Show/hide
Query:  MAFGQSRSSNYALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQATTSES
        MAFGQSRSSNYALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQATTSES
Subjt:  MAFGQSRSSNYALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQATTSES

Query:  AKEGS
        AKEGS
Subjt:  AKEGS

A0A1S3C408 Patatin1.2e-4492.66Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
        MAFGQSRSSNY    ALGSSLGEGGPSSSTD DAGNVKKLIEL DEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT

Query:  TSESAKEGS
        T ESAKE S
Subjt:  TSESAKEGS

A0A5A7T4F9 Patatin1.2e-4492.66Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
        MAFGQSRSSNY    ALGSSLGEGGPSSSTD DAGNVKKLIEL DEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT

Query:  TSESAKEGS
        T ESAKE S
Subjt:  TSESAKEGS

A0A6J1FDX2 Patatin6.9e-4083.49Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
        MAFGQSRSSNY    ALGSSLG+ GP+SSTD DAGNVK L++L DEVLKQKNVESVLFGGKRF+EQTNFEKLDWFA ELVLEHQRR CRIAPTVAFKQAT
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT

Query:  TSESAKEGS
        T E AKE S
Subjt:  TSESAKEGS

A0A6J1JQF4 Patatin3.4e-3982.57Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
        MAFGQSRSSNY    ALGSSLG+ GP+S TD DAGNVK L++L DEVLKQKNVESVLFGGKRF+EQTNFEKLDWFA ELVLEHQRR CRIAPTVAFKQAT
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT

Query:  TSESAKEGS
        T E AKE S
Subjt:  TSESAKEGS

SwissProt top hitse value%identityAlignment
B8B7E7 Patatin-like protein 32.7e-0938.95Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVA
        MAFGQ R+SNY     +G +   GG  +     A   +K + + + +L+Q+NVE+V+F G+R A +TN EK++ FA EL+ EH RR   + P  +
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVA

O80959 Patatin-like protein 62.5e-2663.64Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQA
        MAFGQ R SNY    A GSS G   P+  TD    NV  L+ + +E+LKQKN ESVLFGGK+  E++N+EKLDW A ELVLEHQRRSCRIAPTVAFKQ+
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQA

Q8H133 Patatin-like protein 86.7e-2460.4Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
        M FG  RSSNY    A GS LG  GP+  TD  A NVKKL E+ DE+LKQ NVESVLFG KR  E +N EK++WFA ELV+E QRRS R +PTV  KQA 
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT

Query:  T
        +
Subjt:  T

Q8H5D4 Patatin-like protein 32.7e-0938.95Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVA
        MAFGQ R+SNY     +G +   GG  +     A   +K + + + +L+Q+NVE+V+F G+R A +TN EK++ FA EL+ EH RR   + P  +
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVA

Q9SV43 Patatin-like protein 71.1e-2665.66Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQA
        MAFG  RSSNY    A GS+LG   P+  TD    NV  L+ + +E+LKQKNVESVLFGGKR  EQ+NFEKLDW A ELVLEHQRR+ RIAPTVAFKQ+
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQA

Arabidopsis top hitse value%identityAlignment
AT2G39220.1 PATATIN-like protein 61.8e-2763.64Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQA
        MAFGQ R SNY    A GSS G   P+  TD    NV  L+ + +E+LKQKN ESVLFGGK+  E++N+EKLDW A ELVLEHQRRSCRIAPTVAFKQ+
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQA

AT3G54950.1 patatin-like protein 67.9e-2865.66Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQA
        MAFG  RSSNY    A GS+LG   P+  TD    NV  L+ + +E+LKQKNVESVLFGGKR  EQ+NFEKLDW A ELVLEHQRR+ RIAPTVAFKQ+
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQA

AT4G29800.1 PATATIN-like protein 84.8e-2560.4Show/hide
Query:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT
        M FG  RSSNY    A GS LG  GP+  TD  A NVKKL E+ DE+LKQ NVESVLFG KR  E +N EK++WFA ELV+E QRRS R +PTV  KQA 
Subjt:  MAFGQSRSSNY----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQAT

Query:  T
        +
Subjt:  T

AT4G29800.2 PATATIN-like protein 86.2e-2559.8Show/hide
Query:  MAFGQSRSSNY-----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQA
        M FG  RSSNY     A GS LG  GP+  TD  A NVKKL E+ DE+LKQ NVESVLFG KR  E +N EK++WFA ELV+E QRRS R +PTV  KQA
Subjt:  MAFGQSRSSNY-----ALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQA

Query:  TT
         +
Subjt:  TT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTTGGTCAGTCCAGGAGCTCTAATTACGCACTTGGGTCGAGCTTAGGCGAGGGTGGACCTAGCTCAAGTACTGATTATGATGCTGGTAATGTAAAGAAGCTAAT
TGAATTGACAGATGAGGTTCTCAAGCAGAAGAATGTTGAATCTGTGCTCTTTGGAGGAAAGCGATTTGCAGAACAGACCAACTTCGAGAAGCTCGACTGGTTTGCTGAAG
AATTAGTGCTTGAACATCAGAGGCGGTCCTGCAGAATTGCTCCCACAGTGGCTTTCAAGCAAGCTACCACCAGCGAAAGTGCTAAGGAAGGTTCATAA
mRNA sequenceShow/hide mRNA sequence
CATGGCATTTGGTCAGTCCAGGAGCTCTAATTACGCACTTGGGTCGAGCTTAGGCGAGGGTGGACCTAGCTCAAGTACTGATTATGATGCTGGTAATGTAAAGAAGCTAA
TTGAATTGACAGATGAGGTTCTCAAGCAGAAGAATGTTGAATCTGTGCTCTTTGGAGGAAAGCGATTTGCAGAACAGACCAACTTCGAGAAGCTCGACTGGTTTGCTGAA
GAATTAGTGCTTGAACATCAGAGGCGGTCCTGCAGAATTGCTCCCACAGTGGCTTTCAAGCAAGCTACCACCAGCGAAAGTGCTAAGGAAGGTTCATAATGACCAAAAGT
ACGTTCACTCTTCCTTCTGCTCTTTTCATAATTCATCACCCTGTCTTCAGCTTGTTTGCTGAATCTTTCTTATTGTGGCTTGTATTACACAAGCTAAGAAGAAAATAAAT
TGTCAGACCCCACCGCTCTTAAGTTAGTTAATGCGGTAGAGATCAATGAATATCAATTAAAAACAAACCTGAAATTTTCAAGTATTCTCACTTAACTTATTTGTCATGCT
TAAACTTGG
Protein sequenceShow/hide protein sequence
MAFGQSRSSNYALGSSLGEGGPSSSTDYDAGNVKKLIELTDEVLKQKNVESVLFGGKRFAEQTNFEKLDWFAEELVLEHQRRSCRIAPTVAFKQATTSESAKEGS