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CSPI06G21400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G21400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUbiquitin family protein
Genome locationChr6:19349285..19351381
RNA-Seq ExpressionCSPI06G21400
SyntenyCSPI06G21400
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0006464 - cellular protein modification process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0031386 - protein tag (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily
IPR039732 - Ubiquitin-like modifier Hub1/Ubl5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7058928.1 unnamed protein product [Microthlaspi erraticum]2.4e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR+EKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

XP_002863802.1 ubiquitin-like protein 5 [Arabidopsis lyrata subsp. lyrata]2.4e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR+EKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

XP_004139444.1 ubiquitin-like protein 5 [Cucumis sativus]2.4e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR+EKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

XP_004149907.1 ubiquitin-like protein 5 [Cucumis sativus]2.4e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

XP_020259735.1 ubiquitin-like protein 5 [Asparagus officinalis]2.4e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRS+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

TrEMBL top hitse value%identityAlignment
A0A1J3HSG3 Ubiquitin-like protein 51.2e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR+EKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

A0A1S3C3F9 ubiquitin-like protein 51.2e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR+EKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

A0A398AR32 Ubiquitin-like domain-containing protein1.2e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR+EKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

A0A6J1BXR9 ubiquitin-like protein 51.2e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR+EKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

A0A6J1I1R2 ubiquitin-like protein 51.2e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR+EKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

SwissProt top hitse value%identityAlignment
Q3T0Z3 Ubiquitin-like protein 53.1e-2880.56Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q6EGX7 Ubiquitin-like protein 53.1e-2880.56Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9BZL1 Ubiquitin-like protein 53.1e-2880.56Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9EPV8 Ubiquitin-like protein 53.1e-2880.56Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9FGZ9 Ubiquitin-like protein 57.0e-3697.26Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTR+EKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

Arabidopsis top hitse value%identityAlignment
AT3G45180.1 Ubiquitin-like superfamily protein5.5e-3695.89Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNE+DTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHI LKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

AT5G42300.1 ubiquitin-like protein 55.0e-3797.26Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTR+EKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGAGGTTGTGCTGAATGATCGGTTGGGGAAGAAGGTCAGAGTGAAATGCAACGAAGATGACACCATTGGTGACTTGAAGAAGCTCGTGGCTGCCCAGACTGGGAC
TAGATCTGAGAAGATTCGGATTCAAAAATGGTACAATATCTACAAGGATCATATTACTCTCAAGGATTATGAAATCCACGACGGCATGGGCCTCGAACTCTACTACAATT
AG
mRNA sequenceShow/hide mRNA sequence
ATGATCGAGGTTGTGCTGAATGATCGGTTGGGGAAGAAGGTCAGAGTGAAATGCAACGAAGATGACACCATTGGTGACTTGAAGAAGCTCGTGGCTGCCCAGACTGGGAC
TAGATCTGAGAAGATTCGGATTCAAAAATGGTACAATATCTACAAGGATCATATTACTCTCAAGGATTATGAAATCCACGACGGCATGGGCCTCGAACTCTACTACAATT
AGGTTATTTTCTCATCGCTTTCCGGATACTTGTTTGTTTTTCTTATGGAATGAATTTTACAGGCTCTGGTTGATGATTACAATTAGGTTATTCTTTTACAACTCTTTTCT
TTTCTAATATTTTTTTTACTCCTTCCATGAGTTCTTGACTAATTTCCCCCGAAGTCCCGTAGTTCCATTTTATTTTAATTTAAATATTGACGATTACAGTGTAAAGGAGA
AAGATCACTTCGAATGTGAAAGCACTACATATTATGTTTTTTATTTGAGATCGACAAGGCATGTTTTGGTTGTTGTAAATTAGACATAAAAGAAGTTGGTGAAACACAAA
GGTGCCCACAGTTCAGATAAATTTTCTGTAGTAGTACTACTCTAATTTTCTCTGTCTATGTATTCGTTAGATCCTTATTTGGAGTATAGTTCATTCTAGGTTACTTAGGA
AGCCTTTCATTCTTGCCGGAGAATCTATATTGGAGCCTTACAACTTCGCTAACTAAATCAAGAAATACTTTTGGAAAATTAATTTACTGAGTAGGGGGCTGTTCATAACT
GTAAGCTGCAATATGTCAAGTCATATCCCTCTGGTTCTTTCTTAACGATCTTGGTCCTTTCTTACGGGGTAGGATTAGCGATTTTTGATCTTTTCAGAAATGAAAATTAT
GGATTTCCTATTACTAATTATATAACCATGTTTTATCTACTATGAGTCATCCATCAATGGTGATCAATTAGTCTGCTGGACCGTGGTAAATTATCAATCATCCATGGTGA
GGTTTTAATTCTGGATCCTTCATTTAGTGAGCCTTACTCCACGTAGCCTGGTGTGTTTTCTTGTAGTCATGGAGAGGCAACTATATACTCCTCAATGTTAAACCTCAAGG
TAAATGTCTTCAACTTCGAGGCCATAGGTTCAAACATTCCACTCCACTTGTCTCTGAGCTAAACAAGTTATATATGTCCCTTGATTGCAGTCAAAACATTGCATAAAATT
CCTTAAACTAGCATTTTAATGATAATACGCTTGTTGAATAGGCGTATTTCTTTGTTTTTATTCTTAGCAAATACTACAGATGGTTGCTTTTCATTTGGGAGAAGCTATGA
TGTAATCAATTGGGAAGACAAAAACTAAAAATGGATTCTTATTACTTAACAAGCTAACTGGTCTAGCTTATATATTGGCCGATAAAACTAAAAACAGCCTAAACAAAGTT
ACTGTTTAGAAACTTCCAGAACATAAAGAAAATGGTAAATACAAAAGACTGGATAATTATTATAACCCTTTAAAGTAAATCCTGCCAACAACTAAGATACATCAAGCTAC
CTGTTTCCATGTTCTTGAATAGTAATGGGCTGATTTATCGCTTTTTAATTCAGTTAATGCAGGCATGGAAAGTC
Protein sequenceShow/hide protein sequence
MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN