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CSPI06G21880 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G21880
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:19833309..19834393
RNA-Seq ExpressionCSPI06G21880
SyntenyCSPI06G21880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057288.1 hypothetical protein E6C27_scaffold280G001290 [Cucumis melo var. makuwa]2.3e-5783.87Show/hide
Query:  MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQSNSSQHIYVHHEPAVME-KTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLE
        MG+N KSSTPNTPFCEKLLKAFG+SHRPKINKLS S SHHE   HQQQ+NSSQHIYVHHEPA+ME KTHSSK+NKY GGDEDSVN  FSNYINRAKRRL 
Subjt:  MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQSNSSQHIYVHHEPAVME-KTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLE

Query:  NMASKKHS-NDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKSSS
        N+ASKKHS NDSS +GKEN+LKAEDRRFSDYI RAR+KLR+TSSSVGL KTKSSS
Subjt:  NMASKKHS-NDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKSSS

KAG6571440.1 hypothetical protein SDJN03_28168, partial [Cucurbita argyrosperma subsp. sororia]6.0e-1044.14Show/hide
Query:  MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQSNSSQHIYVHHEPAVMEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLEN
        MGKN+KSS   +  CE+ LKA GM   P         + HE      + +  Q + ++  P + +K     N+            AFS+YINRAKRRL +
Subjt:  MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQSNSSQHIYVHHEPAVMEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLEN

Query:  MASKKHSNDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSVG
        ++SK+H  D SS+GKE NLK EDRRF+DYI+RARN+LR+TSS+VG
Subjt:  MASKKHSNDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSVG

KAG6606435.1 hypothetical protein SDJN03_03752, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1146.53Show/hide
Query:  MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQSNSSQHIYVHHEPAVMEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLEN
        MG+NSKSS  N P CEKLLKA G+   P+I K              +Q         H     ++     K  K      + VN  FS+YI+RAKRRL +
Subjt:  MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQSNSSQHIYVHHEPAVMEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLEN

Query:  MASKKHSNDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSV
        ++SK+H  D SSRGKEN    ED RFSDYIVRARNKL++TSSSV
Subjt:  MASKKHSNDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSV

KGN47879.1 hypothetical protein Csa_004306 [Cucumis sativus]1.2e-7499.36Show/hide
Query:  MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQSNSSQHIYVHHEPAVMEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLEN
        MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQ NSSQHIYVHHEPAVMEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLEN
Subjt:  MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQSNSSQHIYVHHEPAVMEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLEN

Query:  MASKKHSNDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKSSSSVK
        MASKKHSNDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKSSSSVK
Subjt:  MASKKHSNDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKSSSSVK

TrEMBL top hitse value%identityAlignment
A0A0A0KG94 Uncharacterized protein5.8e-7599.36Show/hide
Query:  MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQSNSSQHIYVHHEPAVMEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLEN
        MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQ NSSQHIYVHHEPAVMEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLEN
Subjt:  MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQSNSSQHIYVHHEPAVMEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLEN

Query:  MASKKHSNDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKSSSSVK
        MASKKHSNDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKSSSSVK
Subjt:  MASKKHSNDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKSSSSVK

A0A5D3CQZ7 Uncharacterized protein1.1e-5783.87Show/hide
Query:  MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQSNSSQHIYVHHEPAVME-KTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLE
        MG+N KSSTPNTPFCEKLLKAFG+SHRPKINKLS S SHHE   HQQQ+NSSQHIYVHHEPA+ME KTHSSK+NKY GGDEDSVN  FSNYINRAKRRL 
Subjt:  MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQSNSSQHIYVHHEPAVME-KTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLE

Query:  NMASKKHS-NDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKSSS
        N+ASKKHS NDSS +GKEN+LKAEDRRFSDYI RAR+KLR+TSSSVGL KTKSSS
Subjt:  NMASKKHS-NDSSSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAAAACTCCAAATCCTCCACCCCCAACACCCCTTTTTGTGAGAAGTTGCTCAAAGCATTTGGAATGAGTCATCGTCCTAAAATCAACAAATTAAGTTCATCCAT
AAGCCACCATGAACACCATCATCATCAACAACAAAGCAACTCTTCTCAGCATATTTATGTTCATCATGAACCTGCAGTAATGGAGAAGACACACAGCTCTAAGAATAATA
AATATGCAGGAGGAGATGAAGATTCTGTAAACGCTGCGTTTAGCAATTACATAAATCGAGCTAAACGAAGGCTGGAAAACATGGCGAGCAAGAAACATAGTAATGACTCG
AGTAGCAGAGGTAAAGAGAATAATCTTAAAGCTGAAGATCGTCGGTTTTCGGATTATATCGTTCGTGCTCGAAATAAGCTGAGGTCTACTTCTTCAAGTGTGGGATTGGC
TAAAACTAAGAGTAGCAGCTCTGTAAAGTGA
mRNA sequenceShow/hide mRNA sequence
TTCTTACACAATCGTTAGCTTGTTACACTTGCAAACACCACATTAACATTATATCATCAATCGAGGAAGCATCCTTATAGTATCTTCCAATAATCAAACTCATCTCTCTT
CTAGTGCTCATTTGATTCCCTTCTCACTACAACAACATCATTTATAGTCACACACCAATATAAATACCAATCCATATTTCCCCATTTACATAACAAATCAAACACACAAC
TTTTTCAATCATAAAAGCATGGGAAAAAACTCCAAATCCTCCACCCCCAACACCCCTTTTTGTGAGAAGTTGCTCAAAGCATTTGGAATGAGTCATCGTCCTAAAATCAA
CAAATTAAGTTCATCCATAAGCCACCATGAACACCATCATCATCAACAACAAAGCAACTCTTCTCAGCATATTTATGTTCATCATGAACCTGCAGTAATGGAGAAGACAC
ACAGCTCTAAGAATAATAAATATGCAGGAGGAGATGAAGATTCTGTAAACGCTGCGTTTAGCAATTACATAAATCGAGCTAAACGAAGGCTGGAAAACATGGCGAGCAAG
AAACATAGTAATGACTCGAGTAGCAGAGGTAAAGAGAATAATCTTAAAGCTGAAGATCGTCGGTTTTCGGATTATATCGTTCGTGCTCGAAATAAGCTGAGGTCTACTTC
TTCAAGTGTGGGATTGGCTAAAACTAAGAGTAGCAGCTCTGTAAAGTGATGATCATAACACCCTCATAATGCTTGCTTGCTTTCTTTTGTTTTGAAGTGGTTTTGTAAAC
AATTAAAATCACCACAAAAGTGATTTTAGTTACTATTAATTCTTGTTTTTCTTTTTGGGTTATGGGTTTTACTTTGTTATCATTGATTATTGGCATTTGAAAGCCATATG
GTGTAGTGATACATACATTACTACAAGGTCTGTAATAATTCTGCTTTACTAAGGGGGATTTAATTGTTTCTCTCATTATTAACTATATATCATTGTATACTATATTTAAC
ATAATGTAATGTGTTCTTTTGTATTTAATAGCATGTGTGTATTACACAAATTTATTGAATACAAACATATTGAAACGGGTTTGGAGTTCTAGTCG
Protein sequenceShow/hide protein sequence
MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQSNSSQHIYVHHEPAVMEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLENMASKKHSNDS
SSRGKENNLKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKSSSSVK