; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G21970 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G21970
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontranscription factor bHLH69-like isoform X3
Genome locationChr6:19919261..19924469
RNA-Seq ExpressionCSPI06G21970
SyntenyCSPI06G21970
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449452.1 PREDICTED: transcription factor bHLH69-like isoform X1 [Cucumis melo]2.6e-9291.5Show/hide
Query:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS
        MEGQNGCNNSVRMLSL+FGANVNIVSQ  RDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIA+TS+FSR+TSTKDVIAVVPSTVQTINGVS
Subjt:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS

Query:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK
        ELR KISYNHLAGSYNSK TDSRNNARG LSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQL+IKDL   +  G+
Subjt:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK

XP_008449453.1 PREDICTED: transcription factor bHLH69-like isoform X2 [Cucumis melo]2.6e-9291.5Show/hide
Query:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS
        MEGQNGCNNSVRMLSL+FGANVNIVSQ  RDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIA+TS+FSR+TSTKDVIAVVPSTVQTINGVS
Subjt:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS

Query:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK
        ELR KISYNHLAGSYNSK TDSRNNARG LSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQL+IKDL   +  G+
Subjt:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK

XP_008449454.1 PREDICTED: transcription factor bHLH69-like isoform X3 [Cucumis melo]2.6e-9291.5Show/hide
Query:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS
        MEGQNGCNNSVRMLSL+FGANVNIVSQ  RDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIA+TS+FSR+TSTKDVIAVVPSTVQTINGVS
Subjt:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS

Query:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK
        ELR KISYNHLAGSYNSK TDSRNNARG LSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQL+IKDL   +  G+
Subjt:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK

XP_016900721.1 PREDICTED: uncharacterized protein LOC103491334 isoform X5 [Cucumis melo]1.5e-9290.59Show/hide
Query:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS
        MEGQNGCNNSVRMLSL+FGANVNIVSQ  RDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIA+TS+FSR+TSTKDVIAVVPSTVQTINGVS
Subjt:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS

Query:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK
        ELR KISYNHLAGSYNSK TDSRNNARG LSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQL+IK +  K+T+  
Subjt:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK

Query:  GG
         G
Subjt:  GG

XP_031742486.1 transcription factor bHLH69 [Cucumis sativus]7.1e-9896.5Show/hide
Query:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS
        MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS
Subjt:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS

Query:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK
        ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDL   +  G+
Subjt:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK

TrEMBL top hitse value%identityAlignment
A0A0A0KHM8 BHLH domain-containing protein3.4e-9896.5Show/hide
Query:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS
        MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS
Subjt:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS

Query:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK
        ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDL   +  G+
Subjt:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK

A0A1S3BM32 transcription factor bHLH69-like isoform X41.3e-9291.5Show/hide
Query:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS
        MEGQNGCNNSVRMLSL+FGANVNIVSQ  RDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIA+TS+FSR+TSTKDVIAVVPSTVQTINGVS
Subjt:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS

Query:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK
        ELR KISYNHLAGSYNSK TDSRNNARG LSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQL+IKDL   +  G+
Subjt:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK

A0A1S3BMP9 transcription factor bHLH69-like isoform X11.3e-9291.5Show/hide
Query:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS
        MEGQNGCNNSVRMLSL+FGANVNIVSQ  RDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIA+TS+FSR+TSTKDVIAVVPSTVQTINGVS
Subjt:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS

Query:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK
        ELR KISYNHLAGSYNSK TDSRNNARG LSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQL+IKDL   +  G+
Subjt:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK

A0A1S3BN01 transcription factor bHLH69-like isoform X21.3e-9291.5Show/hide
Query:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS
        MEGQNGCNNSVRMLSL+FGANVNIVSQ  RDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIA+TS+FSR+TSTKDVIAVVPSTVQTINGVS
Subjt:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS

Query:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK
        ELR KISYNHLAGSYNSK TDSRNNARG LSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQL+IKDL   +  G+
Subjt:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK

A0A1S4DXL3 uncharacterized protein LOC103491334 isoform X57.4e-9390.59Show/hide
Query:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS
        MEGQNGCNNSVRMLSL+FGANVNIVSQ  RDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIA+TS+FSR+TSTKDVIAVVPSTVQTINGVS
Subjt:  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVS

Query:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK
        ELR KISYNHLAGSYNSK TDSRNNARG LSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQL+IK +  K+T+  
Subjt:  ELRGKISYNHLAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGK

Query:  GG
         G
Subjt:  GG

SwissProt top hitse value%identityAlignment
P04146 Copia protein9.8e-1032.56Show/hide
Query:  WCVAMVEKVTVLHDNCTWDLVSLPAGKKPIECKRVLQIAVKVNPDGSIAGLKACLVAKDYAQIYGVDYANTFSPRAKMASIDTPLASSSVRLFISLASIN
        W  A+  ++     N TW +   P  K  ++ + V   +VK N  G+    KA LVA+ + Q Y +DY  TF+P A++         SS R  +SL    
Subjt:  WCVAMVEKVTVLHDNCTWDLVSLPAGKKPIECKRVLQIAVKVNPDGSIAGLKACLVAKDYAQIYGVDYANTFSPRAKMASIDTPLASSSVRLFISLASIN

Query:  HWPLLQLDINNAFLHGDLQEEVYMEQTPG
        +  + Q+D+  AFL+G L+EE+YM    G
Subjt:  HWPLLQLDINNAFLHGDLQEEVYMEQTPG

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-1842.52Show/hide
Query:  AMVEKVTVLHDNCTWDLVSLPAGKKPIECKRVLQIAVKVNPDGSIAGLKACLVAKDYAQIYGVDYANTFSPRAKMASIDTPLASSSVRLFISLASINHWP
        AM E++  L  N T+ LV LP GK+P++CK V ++  K + D  +   KA LV K + Q  G+D+   FSP  KM         +S+R  +SLA+     
Subjt:  AMVEKVTVLHDNCTWDLVSLPAGKKPIECKRVLQIAVKVNPDGSIAGLKACLVAKDYAQIYGVDYANTFSPRAKMASIDTPLASSSVRLFISLASINHWP

Query:  LLQLDINNAFLHGDLQEEVYMEQTPGF
        + QLD+  AFLHGDL+EE+YMEQ  GF
Subjt:  LLQLDINNAFLHGDLQEEVYMEQTPGF

P92520 Uncharacterized mitochondrial protein AtMg008202.9e-0935.48Show/hide
Query:  SKAFLS-FDQKMSADLPIALRKELAFILNIVHEALSHLGWCVAMVEKVTVLHDNCTWDLVSLPAGKKPIECKRVLQIAVKVNPDGSIAGLKACLVAKDYA
        SKA ++  + K S  +   ++KE   ++     AL   GWC AM E++  L  N TW LV  P  +  + CK V +   K++ DG++  LKA LVAK + 
Subjt:  SKAFLS-FDQKMSADLPIALRKELAFILNIVHEALSHLGWCVAMVEKVTVLHDNCTWDLVSLPAGKKPIECKRVLQIAVKVNPDGSIAGLKACLVAKDYA

Query:  QIYGVDYANTFSPRAKMASIDTPL
        Q  G+ +  T+SP  + A+I T L
Subjt:  QIYGVDYANTFSPRAKMASIDTPL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.0e-1935.5Show/hide
Query:  STSIHPPITKASL----------SPSVSCPASKAFLSFDQKMSADLPIALRKELAFILNIVHEALSHLGWCVAMVEKVTVLHDNCTWDLVSLPAGKKPIE
        S  IHPP   A +          + S+   A    +  + K S  + +A   E    +    +AL    W  AM  ++     N TWDLV  P     I 
Subjt:  STSIHPPITKASL----------SPSVSCPASKAFLSFDQKMSADLPIALRKELAFILNIVHEALSHLGWCVAMVEKVTVLHDNCTWDLVSLPAGKKPIE

Query:  CKRVLQIAVKVNPDGSIAGLKACLVAKDYAQIYGVDYANTFSPRAKMASIDTPLASSSVRLFISLASINHWPLLQLDINNAFLHGDLQEEVYMEQTPGFV
          R +    K N DGS+   KA LVAK Y Q  G+DYA TFSP  K         S+S+R+ + +A    WP+ QLD+NNAFL G L ++VYM Q PGF+
Subjt:  CKRVLQIAVKVNPDGSIAGLKACLVAKDYAQIYGVDYANTFSPRAKMASIDTPLASSSVRLFISLASINHWPLLQLDINNAFLHGDLQEEVYMEQTPGFV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.0e-1934.65Show/hide
Query:  PFDPLFDSSLFVSTSIHPPITKASLSPSVSCPASKAFLSFDQKMSADLPIALRKELAFILNIVHEALSHLGWCVAMVEKVTVLHDNCTWDLVSLPAGKKP
        P  P+  +   +  +   P+     + S++  A       +QK S    +A   E    +    +A+    W  AM  ++     N TWDLV  P     
Subjt:  PFDPLFDSSLFVSTSIHPPITKASLSPSVSCPASKAFLSFDQKMSADLPIALRKELAFILNIVHEALSHLGWCVAMVEKVTVLHDNCTWDLVSLPAGKKP

Query:  IECKRVLQIAVKVNPDGSIAGLKACLVAKDYAQIYGVDYANTFSPRAKMASIDTPLASSSVRLFISLASINHWPLLQLDINNAFLHGDLQEEVYMEQTPG
        I   R +    K N DGS+   KA LVAK Y Q  G+DYA TFSP  K         S+S+R+ + +A    WP+ QLD+NNAFL G L +EVYM Q PG
Subjt:  IECKRVLQIAVKVNPDGSIAGLKACLVAKDYAQIYGVDYANTFSPRAKMASIDTPLASSSVRLFISLASINHWPLLQLDINNAFLHGDLQEEVYMEQTPG

Query:  FV
        FV
Subjt:  FV

Arabidopsis top hitse value%identityAlignment
AT4G02590.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.8e-0638.67Show/hide
Query:  RPSSSSKRGYS------ADRQRKMRIAERLEALLELLPP-SKENQASALDDAIDHIKYLQLQIKDLMTKQTIGKG
        RP   ++RG +      A+R R+ RIAER+ AL EL+P  +K ++A+ +D+ +D++K+L+LQ+K L   +  G G
Subjt:  RPSSSSKRGYS------ADRQRKMRIAERLEALLELLPP-SKENQASALDDAIDHIKYLQLQIKDLMTKQTIGKG

AT4G02590.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.8e-0638.67Show/hide
Query:  RPSSSSKRGYS------ADRQRKMRIAERLEALLELLPP-SKENQASALDDAIDHIKYLQLQIKDLMTKQTIGKG
        RP   ++RG +      A+R R+ RIAER+ AL EL+P  +K ++A+ +D+ +D++K+L+LQ+K L   +  G G
Subjt:  RPSSSSKRGYS------ADRQRKMRIAERLEALLELLPP-SKENQASALDDAIDHIKYLQLQIKDLMTKQTIGKG

AT4G02590.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.8e-0638.67Show/hide
Query:  RPSSSSKRGYS------ADRQRKMRIAERLEALLELLPP-SKENQASALDDAIDHIKYLQLQIKDLMTKQTIGKG
        RP   ++RG +      A+R R+ RIAER+ AL EL+P  +K ++A+ +D+ +D++K+L+LQ+K L   +  G G
Subjt:  RPSSSSKRGYS------ADRQRKMRIAERLEALLELLPP-SKENQASALDDAIDHIKYLQLQIKDLMTKQTIGKG

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 85.9e-2644.2Show/hide
Query:  HEALSHLGWCVAMVEKVTVLHDNCTWDLVSLPAGKKPIECKRVLQIAVKVNPDGSIAGLKACLVAKDYAQIYGVDYANTFSPRAKMASIDTPLASSSVRL
        +EA   L WC AM +++  +    TW++ +LP  KKPI CK V +I  K N DG+I   KA LVAK Y Q  G+D+  TFSP  K+         +SV+L
Subjt:  HEALSHLGWCVAMVEKVTVLHDNCTWDLVSLPAGKKPIECKRVLQIAVKVNPDGSIAGLKACLVAKDYAQIYGVDYANTFSPRAKMASIDTPLASSSVRL

Query:  FISLASINHWPLLQLDINNAFLHGDLQEEVYMEQTPGF
         +++++I ++ L QLDI+NAFL+GDL EE+YM+  PG+
Subjt:  FISLASINHWPLLQLDINNAFLHGDLQEEVYMEQTPGF

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.0e-1035.48Show/hide
Query:  SKAFLS-FDQKMSADLPIALRKELAFILNIVHEALSHLGWCVAMVEKVTVLHDNCTWDLVSLPAGKKPIECKRVLQIAVKVNPDGSIAGLKACLVAKDYA
        SKA ++  + K S  +   ++KE   ++     AL   GWC AM E++  L  N TW LV  P  +  + CK V +   K++ DG++  LKA LVAK + 
Subjt:  SKAFLS-FDQKMSADLPIALRKELAFILNIVHEALSHLGWCVAMVEKVTVLHDNCTWDLVSLPAGKKPIECKRVLQIAVKVNPDGSIAGLKACLVAKDYA

Query:  QIYGVDYANTFSPRAKMASIDTPL
        Q  G+ +  T+SP  + A+I T L
Subjt:  QIYGVDYANTFSPRAKMASIDTPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGACAAAATGGCTGCAATAACTCTGTACGAATGCTCTCTCTCGACTTTGGTGCGAATGTCAACATTGTTTCCCAAGTACCTAGAGATTTTACAAACCATCACCA
TGTTTTGCCTGCTGATAGGAATGTAAACCAAACCAACATCCCCCACTTAACTGAGTGGACCCAAGCTGCAAAAACGTCTCCGGCCTTTGTTGAGTTTATTGCTGAAACTT
CAAGCTTTTCTCGAAAGACATCAACCAAAGATGTGATAGCAGTTGTTCCCAGTACTGTTCAAACTATAAATGGAGTCTCAGAGCTTCGTGGCAAAATTTCATACAATCAT
CTCGCAGGTTCATACAATTCAAAATCTACTGATTCACGGAATAATGCACGGGGCATTCTATCCAAATCACGTCCCAGTTCATCAAGCAAGAGAGGTTATTCAGCTGATCG
TCAACGCAAGATGAGGATAGCTGAAAGACTTGAAGCATTGCTAGAACTGCTGCCTCCTTCTAAGGAAAATCAAGCATCGGCTCTGGATGATGCCATTGACCATATCAAGT
ACTTACAGCTTCAAATAAAGGATCTTATGACGAAGCAAACTATTGGTAAAGGGGGTGAATTTGGAGGTCTTTGCATTTTTGAACCACGAATACCTACAATCATCACATGC
TCTAGCATGTCGTCTCCCTTTAAAGAACATTGTCAGTTGGGTCATTTGTCTATCTCTGTGTCGAAGACCAATAAACGAGCTGGTGCTCCATTTGAATTAGCTCATTATGA
TGTTTGGGGTCAGTGTCCTATTGAGTTCAAAGGAGGGTTTCGATATTTTGTTACATTTGTTGATGACCATTCTCATTCTTATTTAGATTCTCATGGCCTTCTTCATCAAT
CTTATTTTATCGATTCTCCACCTCAAAATGGGGTTGCCATTGCAAAACGAAAGAATCATATGCATGTTCCACAATCTTTTTGGTATGCTGTTTCCACTACCTGGGAGCAC
TTGGAGTCAGAGGATGATTTCCTTGTCTATAGTGTTGTTTTCCCTTTTGATCCTCTTTTCGATTCATCTTTATTTGTGTCTACCTCTATTCATCCACCCATCACTAAGGC
TTCTTTGTCTCCTTCAGTTTCATGCCCTGCATCAAAGGCTTTTTTGTCATTCGATCAGAAAATGAGTGCTGATCTTCCTATTGCTCTTCGTAAAGAGTTAGCATTCATCC
TTAATATCGTTCATGAAGCCTTGTCTCATCTCGGTTGGTGTGTTGCAATGGTGGAGAAGGTGACCGTCTTACATGACAATTGTACTTGGGATTTAGTTTCTCTCCCTGCA
GGAAAGAAGCCTATAGAATGCAAAAGGGTGTTGCAGATTGCTGTTAAAGTTAATCCTGATGGTTCTATTGCTGGATTAAAGGCTTGCCTTGTAGCGAAAGACTATGCACA
AATATATGGTGTTGACTATGCTAATACTTTTTCTCCAAGAGCAAAAATGGCATCTATTGACACCCCTTTAGCGTCCTCATCTGTGAGATTGTTCATTTCATTAGCTTCAA
TTAATCACTGGCCTTTACTTCAGCTTGATATTAACAATGCATTTCTTCATGGTGATCTTCAAGAAGAGGTGTATATGGAGCAAACACCAGGATTTGTCACTTAG
mRNA sequenceShow/hide mRNA sequence
AATGCAGGTAAAATGGAAGGACAAAATGGCTGCAATAACTCTGTACGAATGCTCTCTCTCGACTTTGGTGCGAATGTCAACATTGTTTCCCAAGTACCTAGAGATTTTAC
AAACCATCACCATGTTTTGCCTGCTGATAGGAATGTAAACCAAACCAACATCCCCCACTTAACTGAGTGGACCCAAGCTGCAAAAACGTCTCCGGCCTTTGTTGAGTTTA
TTGCTGAAACTTCAAGCTTTTCTCGAAAGACATCAACCAAAGATGTGATAGCAGTTGTTCCCAGTACTGTTCAAACTATAAATGGAGTCTCAGAGCTTCGTGGCAAAATT
TCATACAATCATCTCGCAGGTTCATACAATTCAAAATCTACTGATTCACGGAATAATGCACGGGGCATTCTATCCAAATCACGTCCCAGTTCATCAAGCAAGAGAGGTTA
TTCAGCTGATCGTCAACGCAAGATGAGGATAGCTGAAAGACTTGAAGCATTGCTAGAACTGCTGCCTCCTTCTAAGGAAAATCAAGCATCGGCTCTGGATGATGCCATTG
ACCATATCAAGTACTTACAGCTTCAAATAAAGGATCTTATGACGAAGCAAACTATTGGTAAAGGGGGTGAATTTGGAGGTCTTTGCATTTTTGAACCACGAATACCTACA
ATCATCACATGCTCTAGCATGTCGTCTCCCTTTAAAGAACATTGTCAGTTGGGTCATTTGTCTATCTCTGTGTCGAAGACCAATAAACGAGCTGGTGCTCCATTTGAATT
AGCTCATTATGATGTTTGGGGTCAGTGTCCTATTGAGTTCAAAGGAGGGTTTCGATATTTTGTTACATTTGTTGATGACCATTCTCATTCTTATTTAGATTCTCATGGCC
TTCTTCATCAATCTTATTTTATCGATTCTCCACCTCAAAATGGGGTTGCCATTGCAAAACGAAAGAATCATATGCATGTTCCACAATCTTTTTGGTATGCTGTTTCCACT
ACCTGGGAGCACTTGGAGTCAGAGGATGATTTCCTTGTCTATAGTGTTGTTTTCCCTTTTGATCCTCTTTTCGATTCATCTTTATTTGTGTCTACCTCTATTCATCCACC
CATCACTAAGGCTTCTTTGTCTCCTTCAGTTTCATGCCCTGCATCAAAGGCTTTTTTGTCATTCGATCAGAAAATGAGTGCTGATCTTCCTATTGCTCTTCGTAAAGAGT
TAGCATTCATCCTTAATATCGTTCATGAAGCCTTGTCTCATCTCGGTTGGTGTGTTGCAATGGTGGAGAAGGTGACCGTCTTACATGACAATTGTACTTGGGATTTAGTT
TCTCTCCCTGCAGGAAAGAAGCCTATAGAATGCAAAAGGGTGTTGCAGATTGCTGTTAAAGTTAATCCTGATGGTTCTATTGCTGGATTAAAGGCTTGCCTTGTAGCGAA
AGACTATGCACAAATATATGGTGTTGACTATGCTAATACTTTTTCTCCAAGAGCAAAAATGGCATCTATTGACACCCCTTTAGCGTCCTCATCTGTGAGATTGTTCATTT
CATTAGCTTCAATTAATCACTGGCCTTTACTTCAGCTTGATATTAACAATGCATTTCTTCATGGTGATCTTCAAGAAGAGGTGTATATGGAGCAAACACCAGGATTTGTC
ACTTAG
Protein sequenceShow/hide protein sequence
MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAAKTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVSELRGKISYNH
LAGSYNSKSTDSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAIDHIKYLQLQIKDLMTKQTIGKGGEFGGLCIFEPRIPTIITC
SSMSSPFKEHCQLGHLSISVSKTNKRAGAPFELAHYDVWGQCPIEFKGGFRYFVTFVDDHSHSYLDSHGLLHQSYFIDSPPQNGVAIAKRKNHMHVPQSFWYAVSTTWEH
LESEDDFLVYSVVFPFDPLFDSSLFVSTSIHPPITKASLSPSVSCPASKAFLSFDQKMSADLPIALRKELAFILNIVHEALSHLGWCVAMVEKVTVLHDNCTWDLVSLPA
GKKPIECKRVLQIAVKVNPDGSIAGLKACLVAKDYAQIYGVDYANTFSPRAKMASIDTPLASSSVRLFISLASINHWPLLQLDINNAFLHGDLQEEVYMEQTPGFVT