; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G22130 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G22130
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibosome-recycling factor, chloroplastic
Genome locationChr6:20047249..20053806
RNA-Seq ExpressionCSPI06G22130
SyntenyCSPI06G22130
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0032544 - plastid translation (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR002661 - Ribosome recycling factor
IPR023584 - Ribosome recycling factor domain
IPR036191 - RRF superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140097.1 ribosome-recycling factor, chloroplastic isoform X1 [Cucumis sativus]6.2e-14399.64Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALV+STQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_008449432.1 PREDICTED: ribosome-recycling factor, chloroplastic isoform X1 [Cucumis melo]3.9e-13796.04Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSAT SIRRSLF NPPPK LLSLRDYNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL+LSTQLSVSGNV KNRR VVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_008449433.1 PREDICTED: ribosome-recycling factor, chloroplastic isoform X2 [Cucumis melo]1.6e-13595.68Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSAT SIRRSLF NPPPK LLSLRDYNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL+LSTQLSVSGNV KNR  VVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_011657524.1 ribosome-recycling factor, chloroplastic isoform X2 [Cucumis sativus]4.5e-14199.28Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALV+STQLSVSGNVFKN RLVVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_038888223.1 ribosome-recycling factor, chloroplastic isoform X1 [Benincasa hispida]6.3e-13593.95Show/hide
Query:  MATPFSATASIRRSLF---QNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTL
        MATPFS+T S+RRS+F   QNPPPK+LLSLRDYN GLNCVKCGS T HLCSWKSASNYVRL+RQALVLSTQLSVSGN+ KNRR VVRAATIEEIEAEKTL
Subjt:  MATPFSATASIRRSLF---QNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTL

Query:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ
        IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQ
Subjt:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ

Query:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

TrEMBL top hitse value%identityAlignment
A0A0A0KJG4 Ribosome-recycling factor, chloroplastic3.0e-14399.64Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALV+STQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A1S3BMN4 Ribosome-recycling factor, chloroplastic1.9e-13796.04Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSAT SIRRSLF NPPPK LLSLRDYNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL+LSTQLSVSGNV KNRR VVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A1S3BMY6 Ribosome-recycling factor, chloroplastic8.0e-13695.68Show/hide
Query:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK
        MATPFSAT SIRRSLF NPPPK LLSLRDYNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL+LSTQLSVSGNV KNR  VVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A6J1ESI6 Ribosome-recycling factor, chloroplastic4.3e-12185.77Show/hide
Query:  MATPFSATASIRRSLF---QNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTL
        MATPFS+T S+ RS+F   Q PPPK+LLS+RDYN GLNC+KCGS T  L SWKSASNY+R+ R AL+L TQ   SGN+ K RR V+RAATIEEIEAEK L
Subjt:  MATPFSATASIRRSLF---QNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTL

Query:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ
        IEKDV+ARMEKTIDTVRS+FNSIRTGR+NPAMLDKIEVEYYGSPV LKSIAQISTPDASSLL+QPYDKSSLKSIEKAIVNS+LGMTPNNDGEVIRLTLPQ
Subjt:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ

Query:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAY+KLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A6J1K744 Ribosome-recycling factor, chloroplastic2.8e-12085.41Show/hide
Query:  MATPFSATASIRRSLFQN---PPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTL
        MATPFS+T S+ R +FQ    PPPK+LLS+RDYN GLNCVKCGS T HL SWKSASNY R+ R AL+L TQ   SGN+ K RR V+RAATIEEIEAEK L
Subjt:  MATPFSATASIRRSLFQN---PPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTL

Query:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ
        IEKDV+ARMEKTIDTVRS+FNSIRTGR+NPAMLDKIEVEYYGSPV LKSIAQISTPDASSLL+QPYDKSSLK IEKAIVNS+LGMTPNNDG+VIRLTLPQ
Subjt:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ

Query:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAY+KLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

SwissProt top hitse value%identityAlignment
A2YMU2 Ribosome-recycling factor, chloroplastic2.1e-7767.11Show/hide
Query:  SASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI
        S++N++ L    +   ++  +  N   ++R V+R ATIEEIEAEK++IE   + RMEK I+TV++NFN++RTGR+NPAMLD+IEVEYYG+PV+LKSIAQI
Subjt:  SASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI

Query:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS
        +TPDA+SLL+QPYDKSSLK IEK IV ++LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AEEGKVA+RNIRRDA+KAY+KLEKEKKLSEDNVKDLS
Subjt:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS

Query:  SDLQKLTDDYMKKIDVLYKQKEKELLKV
        +DLQK+TD+YMKKI+ + KQKE+EL+K+
Subjt:  SDLQKLTDDYMKKIDVLYKQKEKELLKV

A3BLC3 Ribosome-recycling factor, chloroplastic2.1e-7767.11Show/hide
Query:  SASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI
        S++N++ L    +   ++  +  N   ++R V+R ATIEEIEAEK++IE   + RMEK I+TV++NFN++RTGR+NPAMLD+IEVEYYG+PV+LKSIAQI
Subjt:  SASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI

Query:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS
        +TPDA+SLL+QPYDKSSLK IEK IV ++LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AEEGKVA+RNIRRDA+KAY+KLEKEKKLSEDNVKDLS
Subjt:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS

Query:  SDLQKLTDDYMKKIDVLYKQKEKELLKV
        +DLQK+TD+YMKKI+ + KQKE+EL+K+
Subjt:  SDLQKLTDDYMKKIDVLYKQKEKELLKV

P37706 Ribosome-recycling factor, chloroplastic (Fragment)1.1e-8169.62Show/hide
Query:  WKSASNYVRLN-------RQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSP
        W +A+NYV++        R+ +VLS          + R   ++ AT+EEIEAEK+LIEK VK RMEKTI+ V+++FNSIRT RSNP MLDKI+VEYYG+P
Subjt:  WKSASNYVRLN-------RQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSP

Query:  VSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKL
         SLKSIAQISTPD+SSLLV PYDKSSLK IEKAIVNSDLG+TPNNDG+VIRL++PQLT++RRKELSK+VAKQAEEGKVA+RNIRRDA+K+Y+KLEKEKKL
Subjt:  VSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKL

Query:  SEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        SEDNVKDLSSDLQK+ D+Y+KK+D ++KQKEKEL+ V
Subjt:  SEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

P82231 Ribosome-recycling factor, chloroplastic1.1e-8468.29Show/hide
Query:  GLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDK
        G++ ++C     ++  W+S++NYVR++      S + +V     +NR    R AT+EE+EAEK+LIE + K RMEKTI+T+RSNFNS+RT R++P MLD+
Subjt:  GLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDK

Query:  IEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAY
        IEVEYYG+PVSLKSIAQISTPDASSLL+ PYDKSSLK+IEKAIV S LG++PNNDGEVIRL+LP LTS+RRKEL+KVV+K AEEGKVAVRNIRRDALK+Y
Subjt:  IEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAY

Query:  EKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        EKLEKEKKLSEDNVKDLS+DLQKLTD+YMKK++ +YKQKE+EL+KV
Subjt:  EKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

Q9M1X0 Ribosome-recycling factor, chloroplastic1.1e-8667.84Show/hide
Query:  MATPFSATASIRRSL-FQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNR----RLVVRAATIEEIEAEK
        MA  FS+TA     L F+    K LLSL D         C  I +   S  +           L L   +++SG     R    RLV+R+ATIEEIEAEK
Subjt:  MATPFSATASIRRSL-FQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNR----RLVVRAATIEEIEAEK

Query:  TLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTL
        + IE DVK++MEKTI+T+R++FNSIRTGRSN AMLDKIEVEYYGSPVSLKSIAQISTPD SSLL+QPYDKSSLK+IEKAIVNSDLG+TPNNDG+VIRL+L
Subjt:  TLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTL

Query:  PQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        P LTS+RRKELSKVVAKQ+EEGKVA+RNIRRDALK+Y+KLEKEKKLSEDNVKDLSSDLQKL D YMKKI+ LYKQKEKEL+KV
Subjt:  PQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

Arabidopsis top hitse value%identityAlignment
AT3G01800.1 Ribosome recycling factor1.5e-2235.96Show/hide
Query:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ
        ++    ++ME  ID +  +   +RTGR+ P MLD I VE  G  + L  +A +S  D  +L V PYD  ++K +EKAIV S LG+ P  DG+ +  ++P 
Subjt:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQ

Query:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKEL
        LT E  + + K+V K +E  K ++R  R+ AL   +K      L +D VK L  ++ +LT  ++K  + + K KEKE+
Subjt:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKEL

AT3G63190.1 ribosome recycling factor, chloroplast precursor8.0e-8867.84Show/hide
Query:  MATPFSATASIRRSL-FQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNR----RLVVRAATIEEIEAEK
        MA  FS+TA     L F+    K LLSL D         C  I +   S  +           L L   +++SG     R    RLV+R+ATIEEIEAEK
Subjt:  MATPFSATASIRRSL-FQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNR----RLVVRAATIEEIEAEK

Query:  TLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTL
        + IE DVK++MEKTI+T+R++FNSIRTGRSN AMLDKIEVEYYGSPVSLKSIAQISTPD SSLL+QPYDKSSLK+IEKAIVNSDLG+TPNNDG+VIRL+L
Subjt:  TLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTL

Query:  PQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        P LTS+RRKELSKVVAKQ+EEGKVA+RNIRRDALK+Y+KLEKEKKLSEDNVKDLSSDLQKL D YMKKI+ LYKQKEKEL+KV
Subjt:  PQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCCCTTTCTCCGCCACCGCCTCTATCCGCCGTTCCCTCTTCCAGAATCCCCCTCCCAAATCCCTCCTCTCACTCCGAGATTATAATGGAGGGTTAAATTGCGT
CAAATGCGGCTCCATTACTGCGCATCTTTGTTCATGGAAGTCAGCTTCCAACTACGTCAGGCTCAACCGACAAGCCCTAGTGCTCTCTACCCAACTCTCTGTTTCTGGGA
ATGTGTTCAAAAACAGAAGGTTAGTTGTGAGGGCTGCAACAATCGAAGAAATTGAAGCAGAGAAAACATTGATCGAGAAAGATGTAAAAGCAAGAATGGAAAAGACCATC
GATACTGTTCGGTCTAATTTCAATTCAATTAGGACTGGGAGATCAAATCCTGCCATGCTTGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCAT
TGCTCAAATTAGTACACCTGATGCAAGCTCACTCTTGGTCCAGCCATATGATAAATCCAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGAATGACTC
CAAACAATGATGGAGAAGTCATACGGTTGACTCTCCCTCAACTCACGTCCGAAAGAAGAAAGGAGCTGTCAAAAGTTGTTGCAAAGCAGGCAGAGGAAGGAAAGGTGGCA
GTAAGGAATATAAGAAGAGATGCTTTAAAAGCGTATGAAAAATTGGAAAAGGAGAAAAAACTTTCGGAAGATAATGTTAAGGACTTGTCAAGTGATTTGCAGAAACTGAC
CGATGACTATATGAAGAAGATTGATGTCTTATACAAGCAAAAAGAGAAGGAATTGTTGAAGGTATGA
mRNA sequenceShow/hide mRNA sequence
CTGTATTCATCGTATCCAAACAACCCTTGCTGATAGCAAAAGAAATTCAAAATCAAATATCTTTTTGAATTCTTATCCATAACTGTGAAGGAGACTTGAATTTGGACAAA
GCAATGGCATCCTTTTGAACTTCAAACCATTTTCCTTCCCCCTTATCACCTTCGATTCTTTCATTTCCGTATCCATGGCCACCCCTTTCTCCGCCACCGCCTCTATCCGC
CGTTCCCTCTTCCAGAATCCCCCTCCCAAATCCCTCCTCTCACTCCGAGATTATAATGGAGGGTTAAATTGCGTCAAATGCGGCTCCATTACTGCGCATCTTTGTTCATG
GAAGTCAGCTTCCAACTACGTCAGGCTCAACCGACAAGCCCTAGTGCTCTCTACCCAACTCTCTGTTTCTGGGAATGTGTTCAAAAACAGAAGGTTAGTTGTGAGGGCTG
CAACAATCGAAGAAATTGAAGCAGAGAAAACATTGATCGAGAAAGATGTAAAAGCAAGAATGGAAAAGACCATCGATACTGTTCGGTCTAATTTCAATTCAATTAGGACT
GGGAGATCAAATCCTGCCATGCTTGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCATTGCTCAAATTAGTACACCTGATGCAAGCTCACTCTT
GGTCCAGCCATATGATAAATCCAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGAATGACTCCAAACAATGATGGAGAAGTCATACGGTTGACTCTCC
CTCAACTCACGTCCGAAAGAAGAAAGGAGCTGTCAAAAGTTGTTGCAAAGCAGGCAGAGGAAGGAAAGGTGGCAGTAAGGAATATAAGAAGAGATGCTTTAAAAGCGTAT
GAAAAATTGGAAAAGGAGAAAAAACTTTCGGAAGATAATGTTAAGGACTTGTCAAGTGATTTGCAGAAACTGACCGATGACTATATGAAGAAGATTGATGTCTTATACAA
GCAAAAAGAGAAGGAATTGTTGAAGGTATGACCAAAAAGCAAATGGTAGAGAGCTTTCCCTTTTGATTGCTGTGAAATATGAAATAATTGTTCGTTTTTCCCCTTGAATA
GAGTTTTGATGTCAATTGTTAGAATCAATCAAACATCTTTCTTTTTTTTTTTTTTCGGTTGAAATGAGAGTCAGCATCCTTGTGGGAAAAAGGTATTCAGCTAGCGATAG
CATTATGCCTTCGGTTTTGTTGTTGTAAAATTGGCACATCTCGAACTTTTCACTTTGTACATTGGAACCGATGTTATCAGTTGCCCATTTGGATTACCATCAACTGTTGA
ACTTACTAGTGTTAAAAAAAAAAATCGGTAATCCGATAAAGTCAAATTATCCAACCCAAACCGTAAGGGTTGGGTTGGGTAGAAAATTAGGAAAAAAAAATTTGAGTATG
GTGGTTGGATTGTGCAAGTAAGGAGTTGGGTTGACTCGGACCAACCTGATTATTTATATATATATAAACTTGATATGCTAGCAAGCAATATTTTGTTAATAATAAACAAG
TGATA
Protein sequenceShow/hide protein sequence
MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNRQALVLSTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTI
DTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVA
VRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV