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CSPI06G22180 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G22180
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCOP9 signalosome complex subunit 8-like
Genome locationChr6:20084168..20086291
RNA-Seq ExpressionCSPI06G22180
SyntenyCSPI06G22180
Gene Ontology termsGO:0000338 - protein deneddylation (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0009753 - response to jasmonic acid (biological process)
GO:0010387 - COP9 signalosome assembly (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008180 - COP9 signalosome (cellular component)
InterPro domainsIPR033205 - COP9 signalosome, subunit CSN8
IPR033464 - CSN8/PSMD8/EIF3K


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140102.1 COP9 signalosome complex subunit 8 isoform X1 [Cucumis sativus]2.0e-82100Show/hide
Query:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
        MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
Subjt:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE

Query:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV
        LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV
Subjt:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV

XP_008449425.1 PREDICTED: COP9 signalosome complex subunit 8 isoform X1 [Cucumis melo]1.6e-7996.03Show/hide
Query:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
        MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWK+IPSTIKENRPELVA+WKIGQKLW RDHRGVYEAIHE
Subjt:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE

Query:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV
        LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQ LGMNEEE  V
Subjt:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV

XP_008449426.1 PREDICTED: COP9 signalosome complex subunit 8 isoform X2 [Cucumis melo]1.6e-7996.03Show/hide
Query:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
        MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWK+IPSTIKENRPELVA+WKIGQKLW RDHRGVYEAIHE
Subjt:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE

Query:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV
        LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQ LGMNEEE  V
Subjt:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV

XP_031743776.1 COP9 signalosome complex subunit 8 isoform X2 [Cucumis sativus]2.0e-82100Show/hide
Query:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
        MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
Subjt:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE

Query:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV
        LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV
Subjt:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV

XP_038888574.1 COP9 signalosome complex subunit 8 [Benincasa hispida]1.4e-7591.39Show/hide
Query:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
        MDF RLTEALASKSYDKIADICDDLMLQAAAEGIAY+DEWPYAIHFLGY YVDDINSARFLWKSIPSTIKENRPEL A+WKIGQKLW+RDH GVYEAI E
Subjt:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE

Query:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV
         DWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTIS+HDTA+FLGMNEEE  V
Subjt:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV

TrEMBL top hitse value%identityAlignment
A0A1S3BMN0 COP9 signalosome complex subunit 8 isoform X17.8e-8096.03Show/hide
Query:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
        MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWK+IPSTIKENRPELVA+WKIGQKLW RDHRGVYEAIHE
Subjt:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE

Query:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV
        LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQ LGMNEEE  V
Subjt:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV

A0A1S3BMY1 COP9 signalosome complex subunit 8 isoform X27.8e-8096.03Show/hide
Query:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
        MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWK+IPSTIKENRPELVA+WKIGQKLW RDHRGVYEAIHE
Subjt:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE

Query:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV
        LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQ LGMNEEE  V
Subjt:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTV

A0A6J1HJJ3 COP9 signalosome complex subunit 8-like5.1e-7185.81Show/hide
Query:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
        MDF RLTEALA KSY+KIADICDDLMLQAAAEG+ Y+DEWPY IHFLGY YVDDINSARF WKSIPSTIKENRPELVA+WKI QKLW++DHRGVYEAIH 
Subjt:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE

Query:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE
         DWCQEVQG+L AFSDLYRRRMFQLLVSAYSTIS+HD A FLGMN EE
Subjt:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE

A0A6J1HVB2 COP9 signalosome complex subunit 8-like6.6e-7185.14Show/hide
Query:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
        MDF RLTEALA KSY+KIADICD+LMLQAAAEG+ Y+DEWPY IHFLG+ YVDDINSARFLWKSIPSTIKENRPELVA+WKI Q+LW++DHRGVYEAIH 
Subjt:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE

Query:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE
         DWCQEVQG+L AFSDLYRRRMFQLLVSAYSTIS+HD A FLGMNEEE
Subjt:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE

A0A6J1JQ49 COP9 signalosome complex subunit 8-like2.3e-7187.16Show/hide
Query:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
        MDF RLTEAL SKSY+KIADICD+LMLQAAAEGIAY+DEWPY IHFLGY YVDDINSARFLWK+IPSTIKENRPELVA+WKIGQKLW+RD+ GVYEAI  
Subjt:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE

Query:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE
         DWCQEV+GLLAAFSDLYR+RMFQLLVSAYSTIS+HDTA FLGMNEEE
Subjt:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE

SwissProt top hitse value%identityAlignment
P43255 COP9 signalosome complex subunit 86.2e-5868Show/hide
Query:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
        MD   + EALA+KS+DKIADICD LMLQ A+EGI Y D+WPYAIH LGYFYVDD +SARFLWK IP+ IKE +PE+VA W IGQKLW  D+ GVYEAI  
Subjt:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE

Query:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVT
         DW QE + ++AAFSDLY +RMFQLL+SAYSTI++HD A FLGM E++ T
Subjt:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVT

Q6GQA6 COP9 signalosome complex subunit 87.1e-2237.96Show/hide
Query:  SKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHELDWCQEVQGLL
        S S+ K+ + C++  L+A   GIA    +   +    Y   +D+N+AR+LWK IPS IK +  EL  IW++GQK+W RD  G+Y +I    W + +Q ++
Subjt:  SKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHELDWCQEVQGLL

Query:  AAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE
         A  D  ++R F L+  AY++IS  D A F+G+  EE
Subjt:  AAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE

Q6P637 COP9 signalosome complex subunit 82.1e-2137.78Show/hide
Query:  SYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHELDWCQEVQGLLAA
        S+ ++ + C++  L+A   GIA    +   +    Y   +D+N+AR+LWK IP  IK    EL  IW++GQK+W RD  G+Y +I    W + +Q ++ A
Subjt:  SYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHELDWCQEVQGLLAA

Query:  FSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE
          D  RRR F L+  AY++IS  D A F+G++ EE
Subjt:  FSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE

Q8VBV7 COP9 signalosome complex subunit 81.3e-2038.52Show/hide
Query:  SYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHELDWCQEVQGLLAA
        S+ K+ D C++  L+A   GIA    +   +    Y   +D+N+AR+LWK IP  IK    EL  IW +GQ++W RD  G+Y  I+   W + VQ ++ A
Subjt:  SYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHELDWCQEVQGLLAA

Query:  FSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE
          D  RRR F L+  AY++I   D A F+G+  EE
Subjt:  FSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE

Q99627 COP9 signalosome complex subunit 81.3e-2038.52Show/hide
Query:  SYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHELDWCQEVQGLLAA
        S+ K+ D C++  L+A   GIA    +   +    Y   +D+N+AR+LWK IP  IK    EL  IW +GQ++W RD  G+Y  I+   W + VQ ++ A
Subjt:  SYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHELDWCQEVQGLLAA

Query:  FSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE
          D  RRR F L+  AY++I   D A F+G+  EE
Subjt:  FSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEE

Arabidopsis top hitse value%identityAlignment
AT4G14110.1 COP9 signalosome, subunit CSN84.4e-5968Show/hide
Query:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE
        MD   + EALA+KS+DKIADICD LMLQ A+EGI Y D+WPYAIH LGYFYVDD +SARFLWK IP+ IKE +PE+VA W IGQKLW  D+ GVYEAI  
Subjt:  MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHE

Query:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVT
         DW QE + ++AAFSDLY +RMFQLL+SAYSTI++HD A FLGM E++ T
Subjt:  LDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGGTCGTCTCACCGAGGCTTTGGCTTCCAAATCTTACGATAAGATTGCTGATATTTGTGACGATCTCATGCTTCAGGCTGCAGCCGAGGGCATCGCTTATAA
GGATGAATGGCCTTACGCCATCCATTTTCTTGGCTACTTTTACGTTGATGACATCAATAGTGCTCGATTTCTCTGGAAATCAATACCTTCTACTATCAAAGAAAACCGAC
CAGAACTGGTTGCCATTTGGAAAATTGGCCAAAAACTATGGGTTCGGGACCATAGGGGTGTATACGAGGCTATTCACGAATTGGATTGGTGCCAAGAAGTTCAAGGCCTA
TTAGCTGCATTTTCAGATCTTTACAGGAGGCGAATGTTTCAGTTGCTGGTCTCTGCCTATTCTACTATAAGCGTCCATGATACAGCTCAGTTTTTGGGAATGAATGAGGA
AGAAGTCACAGTTTGTAAGTTTCTTTATTAA
mRNA sequenceShow/hide mRNA sequence
TTTTAAAATCCAAAAAGTTAAATGATATGATAGAGAAGGTAGCTGAGCTGAATATCATTTTAGAGTAGGAGGGGAAGAGGAAGAGGAAGAGGAGAAGAGAGTGCAATCAT
GGATTTTGGTCGTCTCACCGAGGCTTTGGCTTCCAAATCTTACGATAAGATTGCTGATATTTGTGACGATCTCATGCTTCAGGCTGCAGCCGAGGGCATCGCTTATAAGG
ATGAATGGCCTTACGCCATCCATTTTCTTGGCTACTTTTACGTTGATGACATCAATAGTGCTCGATTTCTCTGGAAATCAATACCTTCTACTATCAAAGAAAACCGACCA
GAACTGGTTGCCATTTGGAAAATTGGCCAAAAACTATGGGTTCGGGACCATAGGGGTGTATACGAGGCTATTCACGAATTGGATTGGTGCCAAGAAGTTCAAGGCCTATT
AGCTGCATTTTCAGATCTTTACAGGAGGCGAATGTTTCAGTTGCTGGTCTCTGCCTATTCTACTATAAGCGTCCATGATACAGCTCAGTTTTTGGGAATGAATGAGGAAG
AAGTCACAGTTTGTAAGTTTCTTTATTAACCAAGTACTTATATGTTTTCCTTCAACTTTTGTGACCATATTATGCTTTCGTTTCTTTATCCATTGGGATAGTGGAACATT
ATTAACGACTGGAAGGTGGTTGCTTTTGTAGTCTTTTGGACTAGTAGTTCTCTCTATCTCTACCACCAACCAACTTGGTTGTATTTGTTTTTGGGCTTTAATTTTTTCAT
CGTTTCTTACCGAAGTATATATTTATTATGGAAAGTTATATGGGC
Protein sequenceShow/hide protein sequence
MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARFLWKSIPSTIKENRPELVAIWKIGQKLWVRDHRGVYEAIHELDWCQEVQGL
LAAFSDLYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTVCKFLY