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CSPI06G22430 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G22430
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationChr6:20340834..20341710
RNA-Seq ExpressionCSPI06G22430
SyntenyCSPI06G22430
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647336.1 hypothetical protein Csa_003380 [Cucumis sativus]5.6e-6899.27Show/hide
Query:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR
        MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDS+GTVDLDEFRAETKR
Subjt:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA
        MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA

XP_008449396.1 PREDICTED: uncharacterized protein LOC103491294 [Cucumis melo]2.6e-6595.62Show/hide
Query:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR
        MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTN DGLLSYSEMLEELHTLRVFETHFGIDVKPDP+ELSSVYSSLFLQFD DS+GTVDLDEF+AETKR
Subjt:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAITAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA

XP_011657544.1 uncharacterized protein LOC105435869 [Cucumis sativus]5.6e-6899.27Show/hide
Query:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR
        MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDS+GTVDLDEFRAETKR
Subjt:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA
        MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA

XP_022135623.1 uncharacterized protein LOC111007532 [Momordica charantia]8.1e-5987.59Show/hide
Query:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR
        MSVEILDSATIVNFVED+ AF AFIRDRFAHLDTN DGLLSY+EML EL +LRVFE HFGIDVKPDPDELS+VYSSLFLQFD DS+G VDLDEF+AETKR
Subjt:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA
        MMLA ANGMGFLPVQMVLEEGSFLMKAVERET I AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA

XP_038888297.1 uncharacterized protein LOC120078146 [Benincasa hispida]5.8e-6595.62Show/hide
Query:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR
        MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTN DGLLSY+EMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDS+GTVDLDEF AETKR
Subjt:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA

TrEMBL top hitse value%identityAlignment
A0A0A0KHT7 Uncharacterized protein2.7e-6899.27Show/hide
Query:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR
        MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDS+GTVDLDEFRAETKR
Subjt:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA
        MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA

A0A1S3BLY5 uncharacterized protein LOC1034912941.3e-6595.62Show/hide
Query:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR
        MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTN DGLLSYSEMLEELHTLRVFETHFGIDVKPDP+ELSSVYSSLFLQFD DS+GTVDLDEF+AETKR
Subjt:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAITAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA

A0A5D3E445 Calcium-binding EF-hand family protein1.3e-6595.62Show/hide
Query:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR
        MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTN DGLLSYSEMLEELHTLRVFETHFGIDVKPDP+ELSSVYSSLFLQFD DS+GTVDLDEF+AETKR
Subjt:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAITAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA

A0A6J1C5B4 uncharacterized protein LOC1110075323.9e-5987.59Show/hide
Query:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR
        MSVEILDSATIVNFVED+ AF AFIRDRFAHLDTN DGLLSY+EML EL +LRVFE HFGIDVKPDPDELS+VYSSLFLQFD DS+G VDLDEF+AETKR
Subjt:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA
        MMLA ANGMGFLPVQMVLEEGSFLMKAVERET I AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAITAA

A0A6J1JN55 uncharacterized protein LOC1114861981.4e-5686.57Show/hide
Query:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR
        MSVEILDSATIVNFVED+ AFGAFI DRFAHLDTN DGLLSYSEML+EL +LRV E  FGIDVKPDPDELSSVYSS+FLQFDR+S+GTVDLDEF+AE KR
Subjt:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAI
        MMLAMANG+G LPVQMVLEEGSFLMKAVERE AI
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein1.5e-1032.03Show/hide
Query:  ILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKRMMLA
        ++ S T++ F+ D  +F +   D F  LD +++G+LS SE+ + L+ +   E+    +V P  DE  +VY+++F +F  D    +    FR     ++ A
Subjt:  ILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKRMMLA

Query:  MANGMGFLPVQMVLEEGSFLMKAVERET
        MA G+G  PV MV+     +MKAV  E+
Subjt:  MANGMGFLPVQMVLEEGSFLMKAVERET

AT2G44310.1 Calcium-binding EF-hand family protein2.4e-2943.7Show/hide
Query:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR
        M V ++D +T+ +FV+D+  F   + +RFA LD N+DG+LS SE+ +   ++R+ E+HFG+DV    DEL+++Y S+F +FD D +G+VDL+EFR+E K+
Subjt:  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKR

Query:  MMLAMANGMGFLPVQMVL--EEGSFLMKAVERETA
        ++LA+A+G+G  P+ MVL  ++ +FL KA + E +
Subjt:  MMLAMANGMGFLPVQMVL--EEGSFLMKAVERETA

AT4G38810.2 Calcium-binding EF-hand family protein2.6e-0725.6Show/hide
Query:  EILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKRMML
        ++LD + IV  VE++  F  F+  +F  LD + DG LS +E+   +  +       G+  +    +   +YS +  +F   S   V   EF+     ++L
Subjt:  EILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKRMML

Query:  AMANGMGFLPVQMVLEEGSFLMKAV
         MA G+   P+ ++  +G  L + V
Subjt:  AMANGMGFLPVQMVLEEGSFLMKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGAGATATTGGATAGTGCTACCATTGTCAACTTCGTTGAAGATGATGTAGCTTTTGGTGCATTCATAAGAGATCGTTTTGCTCACCTAGATACCAACCGTGA
TGGTCTCCTTTCCTACAGTGAGATGTTGGAGGAGTTGCATACCCTCAGGGTTTTCGAGACCCATTTTGGAATTGATGTGAAGCCTGATCCGGATGAGCTTTCTTCTGTCT
ATAGTTCTCTGTTTTTGCAGTTTGATCGTGACTCAAATGGAACAGTTGATCTGGATGAGTTTAGGGCTGAGACCAAAAGGATGATGTTAGCTATGGCTAATGGGATGGGA
TTCTTACCTGTTCAGATGGTGCTTGAAGAGGGAAGCTTCTTGATGAAGGCTGTTGAGAGGGAAACCGCAATAACGGCCGCTTGA
mRNA sequenceShow/hide mRNA sequence
AATTGCACCAACTTCTCTTTATCTTGACTTTGTTTCCCTTATTTTATTCCATTACTTACAACATCCTTAAATCAAAGATCTGCCCCTCCCCCCCACAATCTTCAAAACCG
AAACAAATTGTCAGAAACAAATGGCCATAGTGAGGACTAAAGCTCCCTCTCCAAGTCCTATTTATATGAAATCCTCAAAGATCCCTCTCCTCATAAAAAAACCCAACTCA
AAATCTTCTCTTCTACTATACCTTCCTATTTCCTTTGTTTATCAGCTAAAATATCAGAGCTAGCTAAAATGAGTGTGGAGATATTGGATAGTGCTACCATTGTCAACTTC
GTTGAAGATGATGTAGCTTTTGGTGCATTCATAAGAGATCGTTTTGCTCACCTAGATACCAACCGTGATGGTCTCCTTTCCTACAGTGAGATGTTGGAGGAGTTGCATAC
CCTCAGGGTTTTCGAGACCCATTTTGGAATTGATGTGAAGCCTGATCCGGATGAGCTTTCTTCTGTCTATAGTTCTCTGTTTTTGCAGTTTGATCGTGACTCAAATGGAA
CAGTTGATCTGGATGAGTTTAGGGCTGAGACCAAAAGGATGATGTTAGCTATGGCTAATGGGATGGGATTCTTACCTGTTCAGATGGTGCTTGAAGAGGGAAGCTTCTTG
ATGAAGGCTGTTGAGAGGGAAACCGCAATAACGGCCGCTTGATCATTCTGACTGCTCTCATAATGAATTACTGAAATAATTTACCTTTTTCTTGCTGTATTAGTAAATTC
AAGAATCAATTCAGAAGAGTGTGGTTTTTCTCAACTGAAATAAAACATATTGTTTTGCTTTTTCAACGTAAGGAAGGTCAATGCATGAAAATTTCCTCTAGATTAAA
Protein sequenceShow/hide protein sequence
MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFGIDVKPDPDELSSVYSSLFLQFDRDSNGTVDLDEFRAETKRMMLAMANGMG
FLPVQMVLEEGSFLMKAVERETAITAA