; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G22710 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G22710
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:20521614..20522193
RNA-Seq ExpressionCSPI06G22710
SyntenyCSPI06G22710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061659.1 hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa]7.4e-4884.17Show/hide
Query:  MGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNEN--DDDDEFDDTYKVVGKLSASLSPEAAEDRADGL
        MGISK LSFVCVIAIL+ KVADAD+DHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNEN  DDDDEFDD YKVVGKLS S+SP+ AED+ADGL
Subjt:  MGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNEN--DDDDEFDDTYKVVGKLSASLSPEAAEDRADGL

Query:  ELGTFSPHDRLSVKEIVLGH
        ELGT SP  +LS   IVLGH
Subjt:  ELGTFSPHDRLSVKEIVLGH

KAE8647343.1 hypothetical protein Csa_003811 [Cucumis sativus]1.4e-51100Show/hide
Query:  MTKMGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDDDEFDDTYKVVGKLSASLSPEAAEDRADG
        MTKMGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDDDEFDDTYKVVGKLSASLSPEAAEDRADG
Subjt:  MTKMGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDDDEFDDTYKVVGKLSASLSPEAAEDRADG

Query:  LEL
        LEL
Subjt:  LEL

KAG6572424.1 hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sororia]8.8e-3365.45Show/hide
Query:  IAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDDDEFDDTYKVVGKLSASL----SPEAAEDRADGLELGTFSPHDR
        I++L  K+A AD  HFGIHA+GHAVEPFCPGGYSDRGDHC H+GRI+SVNY E+DDDD+FDDTYKV+GKLS ++    S + AE  A GLEL   SP ++
Subjt:  IAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDDDEFDDTYKVVGKLSASL----SPEAAEDRADGLELGTFSPHDR

Query:  LSVKEIVLGH
        LS K  VLGH
Subjt:  LSVKEIVLGH

KAG6589281.1 hypothetical protein SDJN03_17846, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1546.83Show/hide
Query:  MGISKGLSFVCVIAILIC----KVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDDDEFDDTYK--VVGKLSASL--SPEAAE
        M ISKGLSF+ ++AI IC    +VADA + H G     HAVE  CPGG    G+HC H GR+++      D+DD+FDDTYK  V G+++ S+  S E AE
Subjt:  MGISKGLSFVCVIAILIC----KVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDDDEFDDTYK--VVGKLSASL--SPEAAE

Query:  DRADGLELGTFSPHDRLSVKEIVLGH
        +RA  +E+ T SP +  + K +VLGH
Subjt:  DRADGLELGTFSPHDRLSVKEIVLGH

PON44611.1 hypothetical protein TorRG33x02_330420 [Trema orientale]5.0e-0435.38Show/hide
Query:  MGISKGLSFVC------VIAILICKVADADADHFG-IHAVGHAVEPFCPGGY-SDRGDHCQHLGRISSVNYNENDD--DDEFDDTYKVVGKLSASLSPEA
        M +S+G    C      VI +     A+AD  H   IHAV H     C GG  S++GD CQ        N +++DD  DD+ DDTYK+V  +  SLS   
Subjt:  MGISKGLSFVC------VIAILICKVADADADHFG-IHAVGHAVEPFCPGGY-SDRGDHCQHLGRISSVNYNENDD--DDEFDDTYKVVGKLSASLSPEA

Query:  AEDRADGL--ELGTFSPHDRLSVKEIVLGH
            A+ L  +  + S  DR++   +VLGH
Subjt:  AEDRADGL--ELGTFSPHDRLSVKEIVLGH

TrEMBL top hitse value%identityAlignment
A0A0A0KE60 Uncharacterized protein1.1e-6299.17Show/hide
Query:  MTKMGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDDDEFDDTYKVVGKLSASLSPEAAEDRADG
        MTKMGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDDDEFDDTYKVVGKLSASLSPEAAEDRADG
Subjt:  MTKMGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDDDEFDDTYKVVGKLSASLSPEAAEDRADG

Query:  LELGTFSPHDRLSVKEIVLGH
        LELG FSPHDRLSVKEIVLGH
Subjt:  LELGTFSPHDRLSVKEIVLGH

A0A2N9FLD3 Uncharacterized protein1.1e-0434.78Show/hide
Query:  VIAILICKVADAD-ADHFG-IHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDD----DDEFDDTYKVVGKLSASLSPEAAEDRA--DGLELGTF
        ++ +L+ KV++AD +DH+  IH + H     C G + + GD C+          N++DD    DD+ DDTYKVV K+S S S    +  +  D  E    
Subjt:  VIAILICKVADAD-ADHFG-IHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDD----DDEFDDTYKVVGKLSASLSPEAAEDRA--DGLELGTF

Query:  SPHDRLSVKEIVLGH
        S  + L+   IVLGH
Subjt:  SPHDRLSVKEIVLGH

A0A2P5B771 Uncharacterized protein2.4e-0435.38Show/hide
Query:  MGISKGLSFVC------VIAILICKVADADADHFG-IHAVGHAVEPFCPGGY-SDRGDHCQHLGRISSVNYNENDD--DDEFDDTYKVVGKLSASLSPEA
        M +S+G    C      VI +     A+AD  H   IHAV H     C GG  S++GD CQ        N +++DD  DD+ DDTYK+V  +  SLS   
Subjt:  MGISKGLSFVC------VIAILICKVADADADHFG-IHAVGHAVEPFCPGGY-SDRGDHCQHLGRISSVNYNENDD--DDEFDDTYKVVGKLSASLSPEA

Query:  AEDRADGL--ELGTFSPHDRLSVKEIVLGH
            A+ L  +  + S  DR++   +VLGH
Subjt:  AEDRADGL--ELGTFSPHDRLSVKEIVLGH

A0A2P5BI74 Uncharacterized protein9.2e-0434.62Show/hide
Query:  MGISKGLSFVC----VIAILICKVADADADHF---GIHAVGHAVEPFCPGGY-SDRGDHCQHLGRISSVNYNENDD--DDEFDDTYKVVGKLSASLSPEA
        M +S+G    C    ++ IL+  ++ A+AD      IHAV H     C GG  S++GD CQ        N +++DD  DD+ DDTYK+V  +  SLS   
Subjt:  MGISKGLSFVC----VIAILICKVADADADHF---GIHAVGHAVEPFCPGGY-SDRGDHCQHLGRISSVNYNENDD--DDEFDDTYKVVGKLSASLSPEA

Query:  AEDRADGL--ELGTFSPHDRLSVKEIVLGH
            A+ L  +  + S  DR++   +VLGH
Subjt:  AEDRADGL--ELGTFSPHDRLSVKEIVLGH

A0A5A7V7L4 Uncharacterized protein3.6e-4884.17Show/hide
Query:  MGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNEN--DDDDEFDDTYKVVGKLSASLSPEAAEDRADGL
        MGISK LSFVCVIAIL+ KVADAD+DHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNEN  DDDDEFDD YKVVGKLS S+SP+ AED+ADGL
Subjt:  MGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNEN--DDDDEFDDTYKVVGKLSASLSPEAAEDRADGL

Query:  ELGTFSPHDRLSVKEIVLGH
        ELGT SP  +LS   IVLGH
Subjt:  ELGTFSPHDRLSVKEIVLGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAAAATGGGAATTTCGAAAGGGCTTTCATTTGTTTGCGTCATCGCCATCTTAATTTGCAAAGTCGCCGACGCCGATGCCGACCACTTCGGGATACACGCGGTGGG
GCACGCGGTGGAGCCCTTCTGCCCAGGTGGATACTCCGACAGAGGGGACCACTGCCAGCACCTCGGCCGCATCAGCTCCGTTAACTACAACGAGAATGACGACGACGATG
AATTTGACGACACTTATAAAGTAGTGGGAAAACTTTCGGCGTCGCTTTCGCCTGAGGCCGCCGAAGATCGGGCGGACGGTTTAGAACTTGGTACCTTTTCACCTCATGAT
CGGCTTTCCGTCAAGGAAATCGTCTTGGGGCATTGA
mRNA sequenceShow/hide mRNA sequence
TCTTAAAAACAATATATATAAGAGAATATATATTAACCCTTTTATTCTAAAATAAAATAAAATTTTAAAAAAATATAAAGATATATATATATAGTGATATTGATCGGTAT
GACCAAAATGGGAATTTCGAAAGGGCTTTCATTTGTTTGCGTCATCGCCATCTTAATTTGCAAAGTCGCCGACGCCGATGCCGACCACTTCGGGATACACGCGGTGGGGC
ACGCGGTGGAGCCCTTCTGCCCAGGTGGATACTCCGACAGAGGGGACCACTGCCAGCACCTCGGCCGCATCAGCTCCGTTAACTACAACGAGAATGACGACGACGATGAA
TTTGACGACACTTATAAAGTAGTGGGAAAACTTTCGGCGTCGCTTTCGCCTGAGGCCGCCGAAGATCGGGCGGACGGTTTAGAACTTGGTACCTTTTCACCTCATGATCG
GCTTTCCGTCAAGGAAATCGTCTTGGGGCATTGATTTTTGGTTCCATTTTTTATTATAATTACTCTCCATCTCTACTTTTTTTTAAAAAAAAAATTATTTCATGACAATT
ATTTGTTTTTGAAATTAATTCTATGTATGG
Protein sequenceShow/hide protein sequence
MTKMGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDDDEFDDTYKVVGKLSASLSPEAAEDRADGLELGTFSPHD
RLSVKEIVLGH