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CSPI06G22950 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G22950
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontranscription factor PAR2-like
Genome locationChr6:20699981..20700761
RNA-Seq ExpressionCSPI06G22950
SyntenyCSPI06G22950
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140253.1 transcription factor PAR2 [Cucumis sativus]8.7e-60100Show/hide
Query:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSECGG
        HQVKAMRALSSFFESLEKEKSECGG
Subjt:  HQVKAMRALSSFFESLEKEKSECGG

XP_008449537.1 PREDICTED: transcription factor PAR2-like [Cucumis melo]9.0e-5797.62Show/hide
Query:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSR-IADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSR IADKIHRNHPVFT EE DEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSR-IADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSSFFESLEKEKSECGG
        QHQVKAMRALSSFFESLEKEKSECGG
Subjt:  QHQVKAMRALSSFFESLEKEKSECGG

XP_022968919.1 transcription factor PAR2-like [Cucurbita maxima]6.9e-4178.4Show/hide
Query:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQFQTL  TT SRQK            HRRRSRR+VP +  A KIHRN  VF S EPDEKE VERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSECGG
        HQVKAMRALS+FFESLEKEKSECGG
Subjt:  HQVKAMRALSSFFESLEKEKSECGG

XP_023554716.1 transcription factor PAR2-like [Cucurbita pepo subsp. pepo]1.4e-4179.2Show/hide
Query:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQFQTL  TT SRQK            HRRRSRR+VP +    KIHRN  VF SEEPDEKE VERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSECGG
        HQVKAMRALSSFFESLEKEKSECGG
Subjt:  HQVKAMRALSSFFESLEKEKSECGG

XP_038887982.1 transcription factor PAR1-like [Benincasa hispida]7.4e-5190.4Show/hide
Query:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDK Q QTLK TTTSRQKTLILNALHKSS  RRRSRRRVPT+RIA+KIHRN  V+ SEE DEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSECGG
        HQVKAMRALSSFFESLEKEKSECGG
Subjt:  HQVKAMRALSSFFESLEKEKSECGG

TrEMBL top hitse value%identityAlignment
A0A0A0KGU6 Uncharacterized protein4.2e-60100Show/hide
Query:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSECGG
        HQVKAMRALSSFFESLEKEKSECGG
Subjt:  HQVKAMRALSSFFESLEKEKSECGG

A0A1S3BM86 transcription factor PAR2-like4.4e-5797.62Show/hide
Query:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSR-IADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSR IADKIHRNHPVFT EE DEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSR-IADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSSFFESLEKEKSECGG
        QHQVKAMRALSSFFESLEKEKSECGG
Subjt:  QHQVKAMRALSSFFESLEKEKSECGG

A0A5A7V5C4 Transcription factor PAR2-like4.4e-5797.62Show/hide
Query:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSR-IADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSR IADKIHRNHPVFT EE DEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSR-IADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSSFFESLEKEKSECGG
        QHQVKAMRALSSFFESLEKEKSECGG
Subjt:  QHQVKAMRALSSFFESLEKEKSECGG

A0A6J1GL48 transcription factor PAR2-like3.4e-4178.4Show/hide
Query:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQFQTL  TT SRQK            HRRRSRR+VP +    KIHRN  VF  EEPDEKE VERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSECGG
        HQVKAMRALSSFFESLEKEKSECGG
Subjt:  HQVKAMRALSSFFESLEKEKSECGG

A0A6J1I119 transcription factor PAR2-like3.4e-4178.4Show/hide
Query:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQFQTL  TT SRQK            HRRRSRR+VP +  A KIHRN  VF S EPDEKE VERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSECGG
        HQVKAMRALS+FFESLEKEKSECGG
Subjt:  HQVKAMRALSSFFESLEKEKSECGG

SwissProt top hitse value%identityAlignment
Q9LXR7 Transcription factor PAR23.1e-1241.75Show/hide
Query:  NALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSE
        +A++ SS    R  R+    R++D           +E +++E VE KI ALQ+IVPGG  LGVD LFE+TA YI+ LQ Q+ A++ L++F E  EK+  +
Subjt:  NALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSE

Query:  CGG
         GG
Subjt:  CGG

Q9SJH0 Transcription factor PAR15.4e-1240.86Show/hide
Query:  RRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSECGG
        RR++RR+  +  + +  R       E  +E++ V+ KI ALQ I+PGG +LGVD LFE+TA YI++LQ Q+K ++ L+SF + +++E  + GG
Subjt:  RRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSECGG

Arabidopsis top hitse value%identityAlignment
AT1G09250.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.2e-0443.48Show/hide
Query:  AVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALS
        AVERK++ L  +VPG   + V  L ++  +YI  L+ QV+AM AL+
Subjt:  AVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALS

AT2G42870.1 phy rapidly regulated 13.8e-1340.86Show/hide
Query:  RRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSECGG
        RR++RR+  +  + +  R       E  +E++ V+ KI ALQ I+PGG +LGVD LFE+TA YI++LQ Q+K ++ L+SF + +++E  + GG
Subjt:  RRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSECGG

AT3G05800.1 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 14.2e-0432.76Show/hide
Query:  DKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQH
        DK    T +  T  R    IL +   +SL RRR+ +  P S +A  I  +     S    +  AV  ++R L  +VPG     + +L ++TA+YI  L+ 
Subjt:  DKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQH

Query:  QVKAMRALSSFFESLE
        QV+AM ALS     L+
Subjt:  QVKAMRALSSFFESLE

AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.5e-0438.3Show/hide
Query:  KEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRAL
        +E +  KIR LQ++VPGG  +    + ++ A Y+  L+ QVKA+  L
Subjt:  KEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRAL

AT3G58850.1 phy rapidly regulated 22.2e-1341.75Show/hide
Query:  NALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSE
        +A++ SS    R  R+    R++D           +E +++E VE KI ALQ+IVPGG  LGVD LFE+TA YI+ LQ Q+ A++ L++F E  EK+  +
Subjt:  NALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSE

Query:  CGG
         GG
Subjt:  CGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAACCTCAATTTCAAACACTCAAATCAACCACCACTTCTCGCCAAAAAACCCTAATCCTCAACGCATTGCACAAATCCTCTCTCCATCGCCGCCGGAGTCGCAG
ACGAGTCCCAACCTCCCGCATTGCCGACAAGATTCACCGAAACCATCCTGTTTTCACTTCCGAAGAACCTGATGAGAAGGAAGCCGTCGAACGCAAGATTCGTGCCTTGC
AGAGCATCGTTCCAGGAGGGGAGTCGCTTGGAGTCGACAAGCTCTTTGAACAGACGGCGGAGTATATAATGAATTTGCAGCATCAAGTGAAGGCCATGAGAGCACTCTCG
AGCTTTTTCGAGAGTTTGGAGAAGGAGAAGTCTGAATGCGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
CGTACCCATTCATACGCATCCCTTTTCTCTCTCTCTCTCTCTCACACACCACTCTCCGCCATGGACAAACCTCAATTTCAAACACTCAAATCAACCACCACTTCTCGCCA
AAAAACCCTAATCCTCAACGCATTGCACAAATCCTCTCTCCATCGCCGCCGGAGTCGCAGACGAGTCCCAACCTCCCGCATTGCCGACAAGATTCACCGAAACCATCCTG
TTTTCACTTCCGAAGAACCTGATGAGAAGGAAGCCGTCGAACGCAAGATTCGTGCCTTGCAGAGCATCGTTCCAGGAGGGGAGTCGCTTGGAGTCGACAAGCTCTTTGAA
CAGACGGCGGAGTATATAATGAATTTGCAGCATCAAGTGAAGGCCATGAGAGCACTCTCGAGCTTTTTCGAGAGTTTGGAGAAGGAGAAGTCTGAATGCGGAGGTTGAAG
AAGATGAGTTTCACTTCTGATTTTGATTTTTTCTTTCTTTCTTTTTTTGATTTGGTTTATTATTATTATTACTATCATCATTTTTTTCCTCTTTTTCATGTGAGAAAAGA
TGGATGAAAGCGTTTGATTCTCAGTGGCTCCATCTTTTTCTCTGTTAGTTGGGAGCAGGATTTCGAATCCTTTTTCCTGTTAATGATCATCATCTTCTATACTCTTTGCT
AGTAAATCTATGTAGCTTTTTAATGGATAGTAAATCAAAATCGACATGGATAGTAATAACAGATTGGAGTGAGAGAGTTCAACAATGTGTTTATGCTCCTGTTTCATTTA
TTCCTTATCAG
Protein sequenceShow/hide protein sequence
MDKPQFQTLKSTTTSRQKTLILNALHKSSLHRRRSRRRVPTSRIADKIHRNHPVFTSEEPDEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALS
SFFESLEKEKSECGG